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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gvermi12110.t1 ID=Gvermi12110.t1|Name=Gvermi12110.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=790bp MNGSTNNNFAEDFEALQRAIEQPDYGLFRAGSHQPITEEELLQVAQPLRL GDEHLGEANYDALARGSSGVVEGRGGEEEDSGAEEGVEEPEEELGREGEG EEWERSVGEGNEEDGGAGVGQTGLENTVMQEDQSSESESATTSDGEQDGE GNGAREPPSPTEEEPRTTDGLPSGGQDQCRLVGEGGEADNGGAREESVQP EIAIQGTGMDGEECAAGAPHHLRESQNAPACFPRSLGGGEPVGLQVDLEG NLTAATKRELELREATETGTGEARLVNNPGLPVKLPVSRSLDQRMREETA DGYPHASQLLATTSTNPLVDLLQGTLLGLCEEKTPFRIEDLFTPSLLRPV TNPPAPSQNLALAVPKNASQQKTGPCSLAGSQGAPHAVQASSQARLLKDV AGNPSVFSRHPMGANQNAPGLPYAQQRAAPTNRRAPKPKGAKVLGVQPLP MKGKASEDRGRRTCESVAQRLSEATGGRRVFMQDARRVRVTKMPRTAPSN VRPPRPPLYPTPPPFPQQPSPPSLMPPHGLEEIQRILAMKRRQPGSSASH AELATILNSLGSQLPRPAIGNENAQEVAPAPVGSQVSTPAKPPIPASGNA STTIDGHELQGDEQDPQGVEDEIVAISPMTPASTERKSVKRKLELTAEER QEKKRIRAIRNRQSAEKSRRRRKAYAMGLESNVVNLRGKSQEWRQSYIKG LTRLSEMQRDIREMYGEEHQISTPAMHDVVDVVGAMVGRCPFSFKREAPE VDLRNIGEDRRRGGHHWFVIHVLSHRGGLSGLQMISALD* back to topspliced messenger RNA >Gvermi12110.t1 ID=Gvermi12110.t1|Name=Gvermi12110.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2370bp|location=Sequence derived from alignment at ScGOVlb_3404:3440653..3443323+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAACGGGTCAACCAACAACAACTTTGCCGAGGACTTCGAGGCTTTGCA GCGGGCAATTGAGCAGCCGGATTACGGCTTGTTCCGTGCTGGGTCCCATC AACCGATTACGGAGGAGGAGCTGCTACAGGTCGCTCAGCCTCTGAGGCTT GGAGATGAGCACCTGGGCGAAGCAAACTACGACGCCCTCGCAAGAGGCAG CTCCGGGGTGGTAGAAGGTAGAGGCGGGGAGGAAGAGGACTCGGGCGCGG AAGAGGGGGTGGAAGAGCCAGAGGAAGAGCTTGGGAGAGAGGGGGAAGGA GAGGAGTGGGAACGCAGCGTTGGGGAAGGGAATGAAGAAGATGGTGGCGC TGGTGTCGGCCAAACTGGTCTGGAGAACACGGTCATGCAAGAAGACCAAT CCTCCGAGAGTGAAAGCGCCACCACTTCCGATGGGGAGCAGGATGGAGAG GGGAATGGTGCACGGGAACCCCCCTCTCCGACAGAGGAAGAACCCAGGAC AACCGATGGTCTTCCTTCGGGCGGCCAAGATCAATGCCGTCTTGTCGGTG AGGGGGGAGAAGCAGATAATGGCGGCGCGAGAGAAGAAAGCGTGCAGCCT GAAATCGCCATTCAGGGAACTGGAATGGACGGCGAAGAATGCGCGGCTGG GGCTCCCCATCATCTCCGGGAGAGTCAAAACGCTCCAGCTTGCTTTCCCC GAAGCCTTGGGGGTGGGGAGCCTGTGGGACTGCAGGTGGACTTGGAGGGC AACCTAACTGCAGCCACCAAGAGGGAGTTGGAACTTCGGGAGGCCACCGA AACGGGAACTGGTGAAGCACGGCTAGTCAACAACCCTGGACTGCCTGTCA AGCTCCCAGTATCTCGGTCTCTCGATCAGAGGATGAGGGAAGAAACTGCC GATGGCTACCCACATGCATCGCAGTTGCTCGCAACGACATCAACCAATCC TCTGGTAGATCTCCTGCAGGGGACACTTCTGGGTCTTTGTGAAGAAAAGA CGCCATTCAGGATTGAGGACCTCTTCACCCCATCTCTCTTGAGGCCGGTC ACGAATCCTCCCGCGCCCTCCCAAAACTTGGCACTGGCTGTGCCCAAAAA CGCTTCACAGCAAAAAACGGGACCGTGCTCGTTAGCTGGAAGCCAGGGAG CTCCACATGCAGTTCAGGCGTCTTCCCAAGCCCGCCTGCTCAAGGATGTT GCGGGCAACCCCTCCGTCTTCTCAAGGCATCCGATGGGCGCAAATCAGAA CGCGCCGGGGCTCCCCTACGCTCAACAAAGGGCGGCTCCCACAAACAGAA GAGCCCCAAAGCCCAAAGGCGCAAAGGTCCTTGGAGTGCAGCCGCTACCA ATGAAGGGCAAAGCCTCCGAGGACAGGGGACGAAGAACATGCGAATCGGT CGCCCAAAGGCTTTCAGAAGCGACCGGTGGCAGGCGAGTGTTCATGCAAG ATGCTCGTCGGGTTCGCGTGACCAAAATGCCTCGAACCGCCCCCTCAAAC GTTCGTCCTCCTCGACCCCCCCTTTACCCGACACCACCCCCTTTCCCTCA ACAGCCGTCTCCACCATCCCTAATGCCACCTCACGGTCTGGAAGAGATCC AACGGATACTGGCCATGAAGAGAAGGCAACCGGGATCTTCGGCAAGCCAT GCAGAGCTTGCAACGATCTTGAACTCTCTTGGAAGCCAGCTTCCCCGACC GGCCATAGGGAACGAAAACGCCCAGGAGGTGGCACCTGCCCCAGTGGGAA GCCAAGTCTCTACCCCTGCGAAGCCGCCCATCCCCGCAAGCGGAAACGCA AGCACGACAATAGATGGGCATGAGCTTCAAGGGGATGAGCAGGATCCTCA AGGGGTGGAAGACGAGATCGTGGCTATAAGTCCGATGACGCCAGCATCCA CGGAACGTAAGTCCGTGAAGAGAAAGCTGGAGCTGACGGCGGAGGAAAGG CAGGAGAAGAAGCGTATCCGCGCGATTCGAAATAGGCAATCGGCAGAGAA GAGCCGCCGCCGCCGGAAGGCGTACGCCATGGGGCTGGAGTCGAACGTCG TGAACCTCCGCGGCAAAAGCCAGGAATGGCGGCAGAGCTACATCAAAGGT CTGACGCGGCTGTCGGAAATGCAGCGGGATATAAGGGAGATGTACGGCGA GGAACATCAAATATCGACGCCGGCCATGCACGATGTGGTGGATGTGGTGG GTGCCATGGTTGGACGCTGCCCGTTCTCATTCAAGAGAGAGGCGCCCGAG GTTGACCTGCGCAATATCGGGGAAGATCGGCGCCGGGGGGGTCATCATTG GTTTGTCATTCATGTGCTTTCTCACCGAGGAGGACTCAGCGGTCTCCAGA TGATTAGTGCTCTCGATTAG back to topprotein sequence of Gvermi12110.t1 >Gvermi12110.t1 ID=Gvermi12110.t1|Name=Gvermi12110.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=790bp
MNGSTNNNFAEDFEALQRAIEQPDYGLFRAGSHQPITEEELLQVAQPLRL GDEHLGEANYDALARGSSGVVEGRGGEEEDSGAEEGVEEPEEELGREGEG EEWERSVGEGNEEDGGAGVGQTGLENTVMQEDQSSESESATTSDGEQDGE GNGAREPPSPTEEEPRTTDGLPSGGQDQCRLVGEGGEADNGGAREESVQP EIAIQGTGMDGEECAAGAPHHLRESQNAPACFPRSLGGGEPVGLQVDLEG NLTAATKRELELREATETGTGEARLVNNPGLPVKLPVSRSLDQRMREETA DGYPHASQLLATTSTNPLVDLLQGTLLGLCEEKTPFRIEDLFTPSLLRPV TNPPAPSQNLALAVPKNASQQKTGPCSLAGSQGAPHAVQASSQARLLKDV AGNPSVFSRHPMGANQNAPGLPYAQQRAAPTNRRAPKPKGAKVLGVQPLP MKGKASEDRGRRTCESVAQRLSEATGGRRVFMQDARRVRVTKMPRTAPSN VRPPRPPLYPTPPPFPQQPSPPSLMPPHGLEEIQRILAMKRRQPGSSASH AELATILNSLGSQLPRPAIGNENAQEVAPAPVGSQVSTPAKPPIPASGNA STTIDGHELQGDEQDPQGVEDEIVAISPMTPASTERKSVKRKLELTAEER QEKKRIRAIRNRQSAEKSRRRRKAYAMGLESNVVNLRGKSQEWRQSYIKG LTRLSEMQRDIREMYGEEHQISTPAMHDVVDVVGAMVGRCPFSFKREAPE VDLRNIGEDRRRGGHHWFVIHVLSHRGGLSGLQMISALD* back to topmRNA from alignment at ScGOVlb_3404:3440653..3443323+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gvermi12110.t1 ID=Gvermi12110.t1|Name=Gvermi12110.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=mRNA|length=2671bp|location=Sequence derived from alignment at ScGOVlb_3404:3440653..3443323+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGAACGGGTCAACCAACAACAACTTTGCCGAGGACTTCGAGGCTTTGCA
GCGGGCAATTGAGCAGCCGGATTACGGCTTGTTCCGTGCTGGGTCCCATC
AACCGATTACGGAGGAGGAGCTGCTACAGGTCGCTCAGCCTCTGAGGCTT
GGAGATGAGCACCTGGGCGAAGCAAACTACGACGCCCTCGCAAGAGGCAG
CTCCGGGGTGGTAGAAGGTAGAGGCGGGGAGGAAGAGGACTCGGGCGCGG
AAGAGGGGGTGGAAGAGCCAGAGGAAGAGCTTGGGAGAGAGGGGGAAGGA
GAGGAGTGGGAACGCAGCGTTGGGGAAGGGAATGAAGAAGATGGTGGCGC
TGGTGTCGGCCAAACTGGTCTGGAGAACACGGTCATGCAAGAAGACCAAT
CCTCCGAGAGTGAAAGCGCCACCACTTCCGATGGGGAGCAGGATGGAGAG
GGGAATGGTGCACGGGAACCCCCCTCTCCGACAGAGGAAGAACCCAGGAC
AACCGATGGTCTTCCTTCGGGCGGCCAAGATCAATGCCGTCTTGTCGGTG
AGGGGGGAGAAGCAGATAATGGCGGCGCGAGAGAAGAAAGCGTGCAGCCT
GAAATCGCCATTCAGGGAACTGGAATGGACGGCGAAGAATGCGCGGCTGG
GGCTCCCCATCATCTCCGGGAGAGTCAAAACGCTCCAGCTTGCTTTCCCC
GAAGCCTTGGGGGTGGGGAGCCTGTGGGACTGCAGGTGGACTTGGAGGGC
AACCTAACTGCAGCCACCAAGAGGGAGTTGGAACTTCGGGAGGCCACCGA
AACGGGAACTGGTGAAGCACGGCTAGTCAACAACCCTGGACTGCCTGTCA
AGCTCCCAGTATCTCGGTCTCTCGATCAGAGGATGAGGGAAGAAACTGCC
GATGGCTACCCACATGCATCGCAGTTGCTCGCAACGACATCAACCAATCC
TCTGGTAGATCTCCTGCAGGGGACACTTCTGGGTCTTTGTGAAGAAAAGA
CGCCATTCAGGATTGAGGACCTCTTCACCCCATCTCTCTTGAGGCCGGTC
ACGAATCCTCCCGCGCCCTCCCAAAACTTGGCACTGGCTGTGCCCAAAAA
CGCTTCACAGCAAAAAACGGGACCGTGCTCGTTAGCTGGAAGCCAGGGAG
CTCCACATGCAGTTCAGGCGTCTTCCCAAGCCCGCCTGCTCAAGGATGTT
GCGGGCAACCCCTCCGTCTTCTCAAGGCATCCGATGGGCGCAAATCAGAA
CGCGCCGGGGCTCCCCTACGCTCAACAAAGGGCGGCTCCCACAAACAGAA
GAGCCCCAAAGCCCAAAGGCGCAAAGGTCCTTGGAGTGCAGCCGCTACCA
ATGAAGGGCAAAGCCTCCGAGGACAGGGGACGAAGAACATGCGAATCGGT
CGCCCAAAGGCTTTCAGAAGCGACCGGTGGCAGGCGAGTGTTCATGCAAG
ATGCTCGTCGGGTTCGCGTGACCAAAATGCCTCGAACCGCCCCCTCAAAC
GTTCGTCCTCCTCGACCCCCCCTTTACCCGACACCACCCCCTTTCCCTCA
ACAGCCGTCTCCACCATCCCTAATGCCACCTCACGGTCTGGAAGAGATCC
AACGGATACTGGCCATGAAGAGAAGGCAACCGGGATCTTCGGCAAGCCAT
GCAGAGCTTGCAACGATCTTGAACTCTCTTGGAAGCCAGCTTCCCCGACC
GGCCATAGGGAACGAAAACGCCCAGGAGGTGGCACCTGCCCCAGTGGGAA
GCCAAGTCTCTACCCCTGCGAAGCCGCCCATCCCCGCAAGCGGAAACGCA
AGCACGACAATAGATGGGCATGAGCTTCAAGGGGATGAGCAGGATCCTCA
AGGGGTGGAAGACGAGATCGTGGCTATAAGTCCGATGACGCCAGCATCCA
CGGAACGTAAGTCCGTGAAGAGAAAGGTATGTGTTGCAAGCCTTGGTCAT
CGTTTTCAAACATTGTCTCTGCCTTGTGATTAGAAGTCTGACTCATTCCC
TATCCCTTTTTGTGCTTGATTTTTCTTGATGTATAGCTGGAGCTGACGGC
GGAGGAAAGGCAGGAGAAGAAGCGTATCCGCGCGATTCGAAATAGGCAAT
CGGCAGAGAAGAGCCGCCGCCGCCGGAAGGCGTACGCCATGGGGCTGGAG
TCGAACGTCGTGAACCTCCGCGGCAAAAGCCAGGAATGGCGGCAGAGCTA
CATCAAAGGTCTGACGCGGCTGTCGGAAATGCAGCGGGATATAAGGGAGA
TGTACGGCGAGGAACATCAAATATCGACGCCGGCCATGCACGATGTGGTG
GATGTGGTGGGTGCCATGGTTGGACGCTGCCCGTTCTCATTCAAGAGAGA
GGCGCCCGAGGTTGACCTGCGCAATATCGGGGAAGATCGGCGCCGGGGGG
GTCGTGGGCGCGGGGGAAGAGGCGGGCCTGCGCGGCGGCCGGGCCCAAGC
AGTCGCGGAGGGCGGGGTAGGGGTGGGGGAAAAAATTAGCGAGCCCTCAA
GTATGTTTTGTCTCAACTTGCGGTTGGTTGAACAAAAGGGCTGGGTTAGC
GTTAACTTCTTACCCGACTAATTCTGATAAAAATGATTCGGAAGATCATT
GGTTTGTCATTCATGTGCTTTCTCACCGAGGAGGACTCAGCGGTCTCCAG
ATGATTAGTGCTCTCGATTAG back to topCoding sequence (CDS) from alignment at ScGOVlb_3404:3440653..3443323+ >Gvermi12110.t1 ID=Gvermi12110.t1|Name=Gvermi12110.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=CDS|length=2370bp|location=Sequence derived from alignment at ScGOVlb_3404:3440653..3443323+ (Gracilaria vermiculophylla HapMaleFtJ_2017 male) ATGAACGGGTCAACCAACAACAACTTTGCCGAGGACTTCGAGGCTTTGCA GCGGGCAATTGAGCAGCCGGATTACGGCTTGTTCCGTGCTGGGTCCCATC AACCGATTACGGAGGAGGAGCTGCTACAGGTCGCTCAGCCTCTGAGGCTT GGAGATGAGCACCTGGGCGAAGCAAACTACGACGCCCTCGCAAGAGGCAG CTCCGGGGTGGTAGAAGGTAGAGGCGGGGAGGAAGAGGACTCGGGCGCGG AAGAGGGGGTGGAAGAGCCAGAGGAAGAGCTTGGGAGAGAGGGGGAAGGA GAGGAGTGGGAACGCAGCGTTGGGGAAGGGAATGAAGAAGATGGTGGCGC TGGTGTCGGCCAAACTGGTCTGGAGAACACGGTCATGCAAGAAGACCAAT CCTCCGAGAGTGAAAGCGCCACCACTTCCGATGGGGAGCAGGATGGAGAG GGGAATGGTGCACGGGAACCCCCCTCTCCGACAGAGGAAGAACCCAGGAC AACCGATGGTCTTCCTTCGGGCGGCCAAGATCAATGCCGTCTTGTCGGTG AGGGGGGAGAAGCAGATAATGGCGGCGCGAGAGAAGAAAGCGTGCAGCCT GAAATCGCCATTCAGGGAACTGGAATGGACGGCGAAGAATGCGCGGCTGG GGCTCCCCATCATCTCCGGGAGAGTCAAAACGCTCCAGCTTGCTTTCCCC GAAGCCTTGGGGGTGGGGAGCCTGTGGGACTGCAGGTGGACTTGGAGGGC AACCTAACTGCAGCCACCAAGAGGGAGTTGGAACTTCGGGAGGCCACCGA AACGGGAACTGGTGAAGCACGGCTAGTCAACAACCCTGGACTGCCTGTCA AGCTCCCAGTATCTCGGTCTCTCGATCAGAGGATGAGGGAAGAAACTGCC GATGGCTACCCACATGCATCGCAGTTGCTCGCAACGACATCAACCAATCC TCTGGTAGATCTCCTGCAGGGGACACTTCTGGGTCTTTGTGAAGAAAAGA CGCCATTCAGGATTGAGGACCTCTTCACCCCATCTCTCTTGAGGCCGGTC ACGAATCCTCCCGCGCCCTCCCAAAACTTGGCACTGGCTGTGCCCAAAAA CGCTTCACAGCAAAAAACGGGACCGTGCTCGTTAGCTGGAAGCCAGGGAG CTCCACATGCAGTTCAGGCGTCTTCCCAAGCCCGCCTGCTCAAGGATGTT GCGGGCAACCCCTCCGTCTTCTCAAGGCATCCGATGGGCGCAAATCAGAA CGCGCCGGGGCTCCCCTACGCTCAACAAAGGGCGGCTCCCACAAACAGAA GAGCCCCAAAGCCCAAAGGCGCAAAGGTCCTTGGAGTGCAGCCGCTACCA ATGAAGGGCAAAGCCTCCGAGGACAGGGGACGAAGAACATGCGAATCGGT CGCCCAAAGGCTTTCAGAAGCGACCGGTGGCAGGCGAGTGTTCATGCAAG ATGCTCGTCGGGTTCGCGTGACCAAAATGCCTCGAACCGCCCCCTCAAAC GTTCGTCCTCCTCGACCCCCCCTTTACCCGACACCACCCCCTTTCCCTCA ACAGCCGTCTCCACCATCCCTAATGCCACCTCACGGTCTGGAAGAGATCC AACGGATACTGGCCATGAAGAGAAGGCAACCGGGATCTTCGGCAAGCCAT GCAGAGCTTGCAACGATCTTGAACTCTCTTGGAAGCCAGCTTCCCCGACC GGCCATAGGGAACGAAAACGCCCAGGAGGTGGCACCTGCCCCAGTGGGAA GCCAAGTCTCTACCCCTGCGAAGCCGCCCATCCCCGCAAGCGGAAACGCA AGCACGACAATAGATGGGCATGAGCTTCAAGGGGATGAGCAGGATCCTCA AGGGGTGGAAGACGAGATCGTGGCTATAAGTCCGATGACGCCAGCATCCA CGGAACGTAAGTCCGTGAAGAGAAAGCTGGAGCTGACGGCGGAGGAAAGG CAGGAGAAGAAGCGTATCCGCGCGATTCGAAATAGGCAATCGGCAGAGAA GAGCCGCCGCCGCCGGAAGGCGTACGCCATGGGGCTGGAGTCGAACGTCG TGAACCTCCGCGGCAAAAGCCAGGAATGGCGGCAGAGCTACATCAAAGGT CTGACGCGGCTGTCGGAAATGCAGCGGGATATAAGGGAGATGTACGGCGA GGAACATCAAATATCGACGCCGGCCATGCACGATGTGGTGGATGTGGTGG GTGCCATGGTTGGACGCTGCCCGTTCTCATTCAAGAGAGAGGCGCCCGAG GTTGACCTGCGCAATATCGGGGAAGATCGGCGCCGGGGGGGTCATCATTG GTTTGTCATTCATGTGCTTTCTCACCGAGGAGGACTCAGCGGTCTCCAGA TGATTAGTGCTCTCGATTAG back to top
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