Ggra8559.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8559.t1
Unique NameGgra8559.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length333
Homology
BLAST of Ggra8559.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 229 bits (583), Expect = 7.520e-64
Identity = 113/268 (42.16%), Postives = 174/268 (64.93%), Query Frame = 0
Query:   16 KNMTARHIKTIGLVSSATVHRMADSSDGIIVLVDEKEAVCVAAIEIKTVSSLRTIQEAQNVARQFSKLVMVNGIKNKASAGEFYRAIVPTVEYRMQCLHHAVCFDCKYVLFAVSKGSNTGVGDIMYVALLGFTEAIKTDYKYCITGIRRCAFLWVGQEAERIPKAYDELLKDSHASDLFSYASFYNISKAYTELVNRNG-PLPPARMIRPSLFVYWNALKGGVDEFSRAMQSLCYTNSSENPVVSVLGRLICAQINNAAIVHRLSLAK 282
            + +  RHI ++GLV S +   +ADS DGI+   +E E   V A EIKT+++L T+ EA ++  QF  L +++ + +  +A E +R ++P+ +YR QCLHHA     K+VLF V+   +   G I+Y  L+ F+E I+  Y + +  +    F WVG+E + IP+ YD LLK+SHASD+ S+AS+Y++S     L++++G P+PPARMIR +  V+WN LKGGVD   R +++L  +N SENPV S++ RL+  Q+NNAA+  RL  A+
Sbjct:  874 RKIVIRHIPSVGLVESKSSTMIADSPDGILACKNEIEESFVCAAEIKTMTALTTVSEATHLREQFGPLTILSDVGSCGAADELFRTLIPSTQYRAQCLHHAATLGLKHVLFIVASSGSVTHGQIIYGCLIQFSEYIRHSYTFTLDSVLSMGFGWVGREPKYIPREYDALLKESHASDINSFASYYSLSTGIRRLIDKDGRPMPPARMIRLTPAVFWNHLKGGVDVIYRYLKTLARSNISENPVTSIIARLLVMQVNNAALCFRLFKAR 1141          
BLAST of Ggra8559.t1 vs. uniprot
Match: R7Q7A3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7A3_CHOCR)

HSP 1 Score: 182 bits (461), Expect = 1.450e-50
Identity = 88/219 (40.18%), Postives = 138/219 (63.01%), Query Frame = 0
Query:   65 SSLRTIQEAQNVARQFSKLVMVNGIKNKASAGEFYRAIVPTVEYRMQCLHHAVCFDCKYVLFAVSKGSNTGVGDIMYVALLGFTEAIKTDYKYCITGIRRCAFLWVGQEAERIPKAYDELLKDSHASDLFSYASFYNISKAYT-ELVNRNGPLPPARMIRPSLFVYWNALKGGVDEFSRAMQSLCYTNSSENPVVSVLGRLICAQINNAAIVHRLSLAK 282
            +S+R+++ A  +  ++  +V +  +     +   ++ +V T  YR Q LHHA       VLF V  G +   G I+YV  + F E ++ +Y Y +  +R  AF WVG+ +ER+P+ YD LL+++HASDL+S+ S+Y +S+A   E++ R  P+PPARMIR +  VYWN  KGGVD  SR +++L  +N SE PVVS++ RL+  Q+NNAA+ +RL  A+
Sbjct:    2 TSVRSVESATTLRARYGPVVSLRNVGTSDRSTGLFKELVGTPAYRAQVLHHAATLGVNNVLFVVGTGGSITKGGIVYVCHIVFAEHMRHNYTYALDCVRTAAFKWVGEGSERVPEQYDALLQNTHASDLYSFVSYYGLSQAIRHEVITRGEPIPPARMIRLTPAVYWNNPKGGVDVISRYVKTLARSNMSECPVVSIIARLLSMQVNNAAVAYRLHKAE 220          
BLAST of Ggra8559.t1 vs. uniprot
Match: A0A2V3ITK4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 97.4 bits (241), Expect = 5.930e-20
Identity = 45/117 (38.46%), Postives = 78/117 (66.67%), Query Frame = 0
Query:   20 ARHIKTIGLVSSATVHRMADSSDGIIVLVDEKEAVCVAAIEIKTVSSLRTIQEAQNVARQFSKLVMVNGIKNKASAGEFYRAIVPTVEYRMQCLHHAVCFDCKYVLFAVSKGSNTGV 136
            A +I+TIGL+SS +   ++DS D ++V +D++EA  V A EIKT++++RT ++ ++V+R F   ++++G+     AG   + +V + +YR++CLHHAVC     V F V+K S  G+
Sbjct:  143 ADYIRTIGLISSRSYLMISDSPDALMVYLDKQEARHVCAFEIKTMNTVRTTEDTRDVSRTFGSSILISGVGRSVDAGLVLQQLVSSTDYRLECLHHAVCLKANKVCFVVAKVSTCGI 259          
The following BLAST results are available for this feature:
BLAST of Ggra8559.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7QKF57.520e-6442.16Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7Q7A31.450e-5040.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ITK45.930e-2038.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011604PD-(D/E)XK endonuclease-like domain superfamilyGENE3D3.90.320.10coord: 9..186
e-value: 2.0E-6
score: 29.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000191_piloncontigtig00000191_pilon:187670..188668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8559.t1Ggra8559.t1Gracilaria gracilis GNS1m malemRNAtig00000191_pilon 187670..188668 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8559.t1 ID=Ggra8559.t1|Name=Ggra8559.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=333bp
MVVADASSPLSAWKNKNMTARHIKTIGLVSSATVHRMADSSDGIIVLVDE
KEAVCVAAIEIKTVSSLRTIQEAQNVARQFSKLVMVNGIKNKASAGEFYR
AIVPTVEYRMQCLHHAVCFDCKYVLFAVSKGSNTGVGDIMYVALLGFTEA
IKTDYKYCITGIRRCAFLWVGQEAERIPKAYDELLKDSHASDLFSYASFY
NISKAYTELVNRNGPLPPARMIRPSLFVYWNALKGGVDEFSRAMQSLCYT
NSSENPVVSVLGRLICAQINNAAIVHRLSLAKRQRVPRPTKLRDISEGLQ
GSPPFGIKAINIWRLCKTLGQRVQNLLWDSST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011604PDDEXK-like_dom_sf