Ggra9289.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9289.t1
Unique NameGgra9289.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length227
Homology
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BLAST of Ggra9289.t1 vs. uniprot
Match: A0A2V3INQ7 (Intracellular protein transport protein USO1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ7_9FLOR)

HSP 1 Score: 144 bits (362), Expect = 9.150e-36
Identity = 84/154 (54.55%), Postives = 113/154 (73.38%), Query Frame = 0 
Query:   54 ASETSTTRVHEHEDALRDAVGTVAATNLELIAAQGLLVEISTDKSSMHAQLMKDRHAIHDLKRQYEGNKHGDVKSATVSDISEADHLSAYVPGVTSAADPAREMSQQ-LYCANADAENLQNVLSPSMTEADSALDLVMGTHESLKTIVHRLKES 206
            +SE S  R+ E E+ALRDA  TVAATNLELIAAQGLLVEIS+DKS MHA+L+  R  I +L+   EGN+H   +S  +S++SEADH ++ VP V S++D A E+S++ L   NA+AENL+  L  SM+E+DSAL+L+    ES++ + HRLKES
Sbjct: 1687 SSEISQKRITELEEALRDAARTVAATNLELIAAQGLLVEISSDKSLMHAELLTARGRIEELETHVEGNEHHASRSVAISEVSEADHNTSDVPVVPSSSDLALEVSERKLESLNAEAENLKFALLRSMSESDSALELIQVICESVRDVEHRLKES 1840
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BLAST of Ggra9289.t1 vs. uniprot
Match: R7QEE8 (Uso1_p115_head domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEE8_CHOCR)

HSP 1 Score: 80.1 bits (196), Expect = 1.180e-13
Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 0 
Query:   61 RVHEHEDALRDAVGTVAATNLELIAAQGLLVEISTDKSSMHAQLMKDRHAIHDLKRQYEGNKHGDVKSATVSDISEADH--LSAYVPGVTSAADPAREMSQQLYC-ANADAENLQNVLSPSMTEADSALDLVMGTH---ESLKTIVHRLKESV 207
            RV E E ALRDA  TV+ATNLELIAAQ LLVE+S DK+++  +L   +  I +LK             + +S++SE +   +  +V G  S +D  +E++++ +  A A+ ENL+ +L  + +EAD A+ L+       E ++   H  K S+
Sbjct: 1722 RVAELEGALRDAARTVSATNLELIAAQALLVELSADKTAIRTELASAQEKIENLKSSLSVESRAPKNESLISEVSEPEQTIVDDFVNGCPSCSD--KEVTEESFRGAQANVENLRTILRRTASEADCAVSLLSTVELKFEQIEREFHLSKSSL 1872
The following BLAST results are available for this feature:
BLAST of Ggra9289.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3INQ79.150e-3654.55Intracellular protein transport protein USO1 n=1 T... [more]
R7QEE81.180e-1335.95Uso1_p115_head domain-containing protein n=1 Tax=C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..28
NoneNo IPR availableCOILSCoilCoilcoord: 32..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000190_piloncontigtig00000190_pilon:88510..89299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9289.t1Ggra9289.t1Gracilaria gracilis GNS1m malemRNAtig00000190_pilon 88510..89299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9289.t1 ID=Ggra9289.t1|Name=Ggra9289.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=227bp
MEAIISEREQAVEKCSDYEKRLNKMSSKVHGVEQTVNEASKLTEALQKAN
DASASETSTTRVHEHEDALRDAVGTVAATNLELIAAQGLLVEISTDKSSM
HAQLMKDRHAIHDLKRQYEGNKHGDVKSATVSDISEADHLSAYVPGVTSA
ADPAREMSQQLYCANADAENLQNVLSPSMTEADSALDLVMGTHESLKTIV
HRLKESVSAFIHSRCREETFRKPYRR*
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