Ggra3384.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3384.t1
Unique NameGgra3384.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length346
Homology
BLAST of Ggra3384.t1 vs. uniprot
Match: A0A2V3IMV5 (Protein LAS1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMV5_9FLOR)

HSP 1 Score: 348 bits (894), Expect = 3.700e-116
Identity = 188/340 (55.29%), Postives = 234/340 (68.82%), Query Frame = 0
Query:    1 MGLLPDGTRVLPWANWPEWLELKDMLTVGEIEQAKARAALYQVRRRGSVPISVLSSVALASQLKNPSPDPYTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQHLNLMYHLPKSLVDLKHVFQNSTEQTLEGEGFESTLLGLNCLSSQDHADSPIVNKMRQMTKRLKDRRKLSISQAPI--GKGRSGTKRWRRCENPEVWKTLSLGLIPGQKRPPCLKKINFWSESSSHTRENPHDAPRDESTPTVSGDDMGARKSHEESFRRRKLNRTTEED-RTITTLTNHFRSLVS 337
            MG  PDGTRVLPWANW EWLELK+MLT G++EQA AR ALYQ+RRR SVPISVL+SV LA QLKNPSPD +TQRL LSMAITR VNGLTDR QPRGQGASARSVH LA+ LGLPL LVDIRHQSCHNLLPRL+ALESGAKQAL WLEQ YW+PQH ++   LP+   +LK V ++     +E  G            S + + + +++KM++  +RL+++++ + ++  I   + R GTKRWRRC N E WKT+ LGLIPGQ+RPP LK     S   +HT +    +   E+   +   DM A +S  E   +  + R TEED   +T   NHFR L+S
Sbjct:    1 MGAFPDGTRVLPWANWSEWLELKNMLTAGDVEQASARVALYQIRRRSSVPISVLTSVTLARQLKNPSPDTFTQRLSLSMAITRFVNGLTDRFQPRGQGASARSVHTLAVGLGLPLILVDIRHQSCHNLLPRLTALESGAKQALVWLEQHYWEPQHRSIALQLPEEYRELKEVIESDASLDVEKAGLWFQTASERSSDSANDSTAILLSKMKEAAERLEEKQRKATTEPRIISKRPRPGTKRWRRCTNSEAWKTVPLGLIPGQERPPRLKVHKPNSGFRAHTTKTTGTSLVQENGE-LETPDMPAIESMGEKPVQSHVRRLTEEDDERVTHFVNHFRGLIS 339          
BLAST of Ggra3384.t1 vs. uniprot
Match: R7QAV5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAV5_CHOCR)

HSP 1 Score: 220 bits (561), Expect = 1.030e-65
Identity = 115/262 (43.89%), Postives = 164/262 (62.60%), Query Frame = 0
Query:    7 GTRVLPWANWPEWLELKDMLTVGEIEQAKARAALYQVRRRGSVPISVLSSVALASQLKNPSPDPYTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQHLNLMYHLPKSLVDLKHVFQNSTE----QTLEG--EGFESTLLGLNCLSSQDHADSPIVNKMRQMTKRLKDRRKLSISQAPIGKGRSGTKRWRRCENPEVWKTLSLGLIPGQKR 262
            GTRVLPWA+W EW EL+DM+  G  E+A  R ALY++RRR +VPI + S++ L  QL+NP PDPY QRL LSM + RLVNG TD++QPRG+ + ARSV+ LA++L LPL LV+IRHQ+ HN LPRLS L+  A++AL WLE+ YW+PQ   +   L  +   ++ VF  +T+    + L+   E   ST +      +  H    ++++MR+++++L+          P     +   RW  C N E W+   LGL+PGQ R
Sbjct:    3 GTRVLPWADWSEWNELRDMIHSGTTERAAKRVALYRLRRRDAVPIRMASTITLMRQLENPDPDPYLQRLALSMTLIRLVNGTTDQLQPRGERSIARSVYSLAVDLKLPLILVEIRHQASHNALPRLSVLKKAAEKALVWLEENYWEPQRKGISSALEGTATGIRKVFGAATDDMNYEILKNGPEEIASTAVTEGGYETPIHHS--VLDRMRELSEKLECNAGNKKKTVPTQHRTTDRPRWALCNNHEAWRITPLGLVPGQTR 262          
BLAST of Ggra3384.t1 vs. uniprot
Match: A0A0L0V9J4 (Uncharacterized protein n=3 Tax=Puccinia striiformis TaxID=27350 RepID=A0A0L0V9J4_9BASI)

HSP 1 Score: 108 bits (269), Expect = 1.450e-22
Identity = 69/186 (37.10%), Postives = 99/186 (53.23%), Query Frame = 0
Query:    5 PDGTRVLPWANWPEWLELKDMLTVGEIEQAKARAAL-----YQVRRRGSVPISVLSSVALASQLKNPSPDPYTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQHLNLMYHLPKSLVDLKHVFQNSTEQTLEGEG 185
            P   R +PW+   E++ + D+L       +  R AL     + +R   S+P ++ ++ AL S +  P P+   QRLGLSMA++RLVN L D +Q   +G  ARS+ ++A ELGLPL LV +RH++ H  LP L+ L   A  AL WL   YW P+           L D++   Q   E T E EG
Sbjct:    3 PSSARKVPWSTPAEFIGVFDLLFSSADPVSSQRIALNHLYAWSIRSPSSLPPAIEATHALLSLILPPVPNVQQQRLGLSMALSRLVNSLVDPLQ---KGMYARSISQIASELGLPLALVQLRHRATHEDLPSLTVLLESANMALDWLYAHYWVPR-----------LNDIEGTGQLKQETTGELEG 174          
BLAST of Ggra3384.t1 vs. uniprot
Match: A0A7S0ZGF2 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGF2_9RHOD)

HSP 1 Score: 103 bits (258), Expect = 2.170e-21
Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 0
Query:    4 LPDGTRVLPWANWPEWLELKDMLTVGEIEQAKARAALYQV---RRRGSVPISVLSSVALASQLKNPSPDP--------YTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQHLNL 158
            + +   V  W +W EW+ +++ L   E ++ +AR AL  V   R RG +P+++ S+V +   L +  P           ++ L LSMA+TRLVNGLT+  Q    G   +SV  +A  + LP+ L ++RH + H  LP L AL   AKQ + WL++FYW PQ + +
Sbjct:    1 MEERVSVGVWRDWEEWIWVREKLLGFENDEEQARRALLLVKMWRVRGEIPLAIDSTVQIICCLLDLKPSTRSTLHDNNISKVLALSMALTRLVNGLTEHYQA---GNYQKSVSSIAQSIKLPVLLTELRHNATHKALPSLDALTLCAKQCIQWLDEFYWTPQWIKV 163          
BLAST of Ggra3384.t1 vs. uniprot
Match: E3K1E3 (Uncharacterized protein n=4 Tax=Puccinia graminis f. sp. tritici TaxID=56615 RepID=E3K1E3_PUCGT)

HSP 1 Score: 104 bits (259), Expect = 3.870e-21
Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 0
Query:    5 PDGTRVLPWANWPEWLELKDMLTVGEIEQAKARAAL-----YQVRRRGSVPISVLSSVALASQLKNPSPDPYTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQ 154
            P   R +PW++  E++ L D+L       A    AL     + +R   S+P ++ ++ AL S +  P+P+   QRLGL+MA++RLVN L D +Q   +G  ARS+ ++A ELGLPL LV +RH++ H  LP L+ L   A  AL WL   YW P+
Sbjct:   29 PALARKVPWSSPAEFIGLFDLLFSSADPLASQPIALNHLYAWSIRSPSSLPPAIEATHALLSLILPPTPNVQQQRLGLAMALSRLVNSLVDPLQ---KGMYARSISQIAAELGLPLALVQLRHRATHEDLPSLTILLQSANLALDWLYTHYWLPR 180          
BLAST of Ggra3384.t1 vs. uniprot
Match: A0A5J4Y778 (Las1-like family expressed n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y778_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 5.150e-20
Identity = 71/205 (34.63%), Postives = 101/205 (49.27%), Query Frame = 0
Query:    9 RVLPWANWPEWLELKDMLTVGEIEQAKARAALYQVRR-RGSVPISV-----LSSVALASQLKNPSPDPYTQ--RLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQHLNLMYHLPKSLVDLKHVFQNSTEQTLEGEGFESTLLGLNCLSSQDHADSP 205
            RV+PWANW +W  +   L   +  Q         V R RG VP++V     L+ + +  Q  + S     +  RL  SMAI R+VNG++D+ Q   +G +A SV   A   GLP  LVD+RH++ HN +P LS L   A QAL WL+  YW+ Q  +L+    K +  LK     +     +  G   + L  +    Q  ADSP
Sbjct:    5 RVVPWANWEQWSAVYRGLFADDAAQKSVALEQLSVWRCRGKVPLAVDVTACLTEINIRDQHSHVSTTASDEVLRLEYSMAIVRMVNGISDKAQ---KGKTATSVSSNAAAAGLPRLLVDVRHEASHNDMPSLSLLRLAAAQALDWLQAAYWQRQETHLLQQQHKVVELLKASSLRTDYVAAKIHGTSFSQLIPSSAHQQRSADSP 206          
BLAST of Ggra3384.t1 vs. uniprot
Match: A0A7S2Z3E6 (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z3E6_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 2.120e-19
Identity = 57/144 (39.58%), Postives = 79/144 (54.86%), Query Frame = 0
Query:   44 RRRGSVPISVLSSVALASQLKNPSPDPYTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQHLNLMYHLPKSLVDLKHVFQNSTEQTLEGEGFE 187
            R RG VP++V ++  L        P  Y QRL LSMA+ RLVNG++  +Q   +G  A+SV  LA  +GLP  LVD+RH++ H+ LP L+ L   A QAL WL   YW+PQ   L     +    LK +   S + +   +G E
Sbjct:    1 RARGRVPLAVDATAELVQIRLQAHPSVYMQRLTLSMALVRLVNGISGALQ---KGVYAKSVASLASSVGLPRVLVDVRHEATHSGLPSLALLSVAADQALDWLRANYWRPQANQLRQQDARVAAILKELLDLSLKSSGGDKGAE 141          
BLAST of Ggra3384.t1 vs. uniprot
Match: A0A0H5RDE0 (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RDE0_9EUKA)

HSP 1 Score: 97.1 bits (240), Expect = 1.120e-18
Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = 0
Query:   10 VLPWANWPEWLELKDMLTVGEIEQAKARAALYQVRRRGSVPISVLSSVALASQLKNPSP-DPYTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQ--HLNLMYHLPKSLVDLKH 171
            V+PW+++ EW  + +       +   A + +   RRRGSVPISV  + +L   L N        QRL +SMAITRLVNG+ D++Q       ARS+  +A ++ +P+  V++RH + HN LP L  L     +AL W+ + YWK +  H   ++H  + +  L H
Sbjct:   17 VVPWSSYQEWNRVYE--AAYSSDPKSALSTINGWRRRGSVPISVDITGSLLESLVNEKRLSSNQQRLAISMAITRLVNGIADKLQT---SLFARSIRDIARDIDMPVVFVEVRHLATHNDLPSLPLLIETRSRALSWIRERYWKAESNHFTEVHHSQQYIHHLFH 176          
BLAST of Ggra3384.t1 vs. uniprot
Match: F0YPF3 (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPF3_AURAN)

HSP 1 Score: 92.0 bits (227), Expect = 8.680e-17
Identity = 62/157 (39.49%), Postives = 79/157 (50.32%), Query Frame = 0
Query:    5 PDGTRVLPWANWPEWLELKDMLTVGE---IEQAKARAALYQVRRRGSVPISVLSSVALASQLKNPSPDPYTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQHLNL 158
            P+  RV+PWA+W EW+ + + L   +   +    AR A +Q+R  G VP +V SS ALA+    P       RL  SM + R VNGL D  Q R Q   A SV  LA + GLP  LVD+RH + HN LP    L S       +    YW PQ   L
Sbjct:  314 PEVPRVVPWADWAEWVWVCEALHGSDAPSVAAGVARVASWQLR--GGVPHAVESSAALAAAAFGPG-----DRLASSMLVVRCVNGLVDAGQTRQQ---AVSVAALAEQRGLPGWLVDVRHAATHNALPSARVLGSARAALAAYFYDEYWAPQRRKL 460          
BLAST of Ggra3384.t1 vs. uniprot
Match: A0A7S3D9J9 (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D9J9_9EUKA)

HSP 1 Score: 90.5 bits (223), Expect = 2.020e-16
Identity = 55/123 (44.72%), Postives = 73/123 (59.35%), Query Frame = 0
Query:   39 ALYQV---RRRGSVPISVLSSVALA---SQLKNPSPDPYTQRLGLSMAITRLVNGLTDRIQPRGQGASARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFYWKPQH 155
            AL+Q+    RRG VP+SV  + AL    S L+    + +  RL LSMAI RLVNG+T+ +Q   QG  + SV  LA ++GLP  LVD+RH + H  LP L  LE    +AL W+ + YW  QH
Sbjct:    3 ALHQISVWERRGHVPLSVEVTGALLRTRSSLRRGETNEFEARLSLSMAILRLVNGVTEPMQ---QGRHSLSVAGLAGKIGLPRLLVDVRHDATHQTLPSLQMLELATDRALEWMWESYWCAQH 122          
The following BLAST results are available for this feature:
BLAST of Ggra3384.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMV53.700e-11655.29Protein LAS1 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QAV51.030e-6543.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0L0V9J41.450e-2237.10Uncharacterized protein n=3 Tax=Puccinia striiform... [more]
A0A7S0ZGF22.170e-2135.54Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
E3K1E33.870e-2139.35Uncharacterized protein n=4 Tax=Puccinia graminis ... [more]
A0A5J4Y7785.150e-2034.63Las1-like family expressed n=1 Tax=Trebouxia sp. A... [more]
A0A7S2Z3E62.120e-1939.58Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A0H5RDE01.120e-1835.15Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
F0YPF38.680e-1739.49Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3D9J92.020e-1644.72Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007174Las1PFAMPF04031Las1coord: 12..152
e-value: 3.7E-29
score: 101.7
IPR007174Las1PANTHERPTHR15002UNCHARACTERIZEDcoord: 7..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:183551..184588 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3384.t1Ggra3384.t1Gracilaria gracilis GNS1m malemRNAtig00000189_pilon 183551..184588 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3384.t1 ID=Ggra3384.t1|Name=Ggra3384.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=346bp
MGLLPDGTRVLPWANWPEWLELKDMLTVGEIEQAKARAALYQVRRRGSVP
ISVLSSVALASQLKNPSPDPYTQRLGLSMAITRLVNGLTDRIQPRGQGAS
ARSVHKLAMELGLPLTLVDIRHQSCHNLLPRLSALESGAKQALFWLEQFY
WKPQHLNLMYHLPKSLVDLKHVFQNSTEQTLEGEGFESTLLGLNCLSSQD
HADSPIVNKMRQMTKRLKDRRKLSISQAPIGKGRSGTKRWRRCENPEVWK
TLSLGLIPGQKRPPCLKKINFWSESSSHTRENPHDAPRDESTPTVSGDDM
GARKSHEESFRRRKLNRTTEEDRTITTLTNHFRSLVSNQPANTTI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007174Las1