Ggra3343.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra3343.t1
Unique Name	Ggra3343.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	1073

Homology

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BLAST of Ggra3343.t1 vs. uniprot
Match: A0A2V3IG71 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG71_9FLOR)

HSP 1 Score: 491 bits (1265), Expect = 1.370e-160
Identity = 260/454 (57.27%), Postives = 345/454 (75.99%), Query Frame = 0

Query:    2 MACFKGKGVYAHKSTHIKPIQIQRNIPVDSYEIPTWFEVQDTESLIYQQSEILSFQLGQMLHLSQEREHLAFAIDREISLSASKRRSFDVLTKKTSRKIKKMKAELAHVTNTLEKLLCDKHDTEKRIDLLRLFRVKALTHELVDKMDLEREDIRAYAEDISKNARMIKHEIQQCNSSISEKEEQLLKSEEVLKKYEAEDQSATSGPSDRSTDVQKLIKLLKKRIESLFECIQELEKLNLLIYFPFTDPRKLDYDTKASEKTKRLSCFQNLASSVIGRHVLWERKSKQVSENAARFIRTRDDAIKKLQSLVRELVKDLKGLRAVQSTGSQFVSGIRDKSQCRKVCLVYYLCQELTNQCDYVAFRACVVQEPVPLLKKDGEQKIVKASDGSINTKKSDRFSFKQSFSQDTRVLRESIVSGVKRIKKVQSCSVERQRRLAKISAELRQHDVDGIRSP 455
            M CFKGKGVYA+ STHIKPIQIQR IPVD YEIP+W++V DT+SLIYQQSEILSFQLGQ+LHLSQEREHL+F I++E + ++SKR SFD++TKK+ +K+K+M+ +L HV+ TLE LL DK DTEKRIDL RLFRVKALTHELV  MDL+R+DI  YA +I++   +IK EIQ  N+SI+EKEEQL KS EVL+KY+AE++S +    DRS +V+ LI LL+KR++SLFECI E EKLNL++YFPF DPR+   D   S+  ++LS      ++  G  VLW+RKSKQVSENA + IR+RD+AI KL+S+V EL+KDL+ LRA +S GS FV  +R++SQ RK+ LVY LC ELT+QCDY+ +RAC+ QE +P   +D  + +  A+       +  + S K+S +QD + L+E IVSGV++IKK QS   ER  RL+ + A L++++V+G+ SP
Sbjct:    1 MGCFKGKGVYAYNSTHIKPIQIQRTIPVDCYEIPSWYDVHDTDSLIYQQSEILSFQLGQLLHLSQEREHLSFQIEKEHAHTSSKRVSFDMITKKSHKKMKRMRGDLLHVSETLENLLGDKLDTEKRIDLFRLFRVKALTHELVRSMDLQRKDITDYAHEITQTVGLIKREIQHSNNSIAEKEEQLEKSMEVLRKYKAENKSKSGSLMDRSKEVETLIMLLEKRLQSLFECIHEFEKLNLVLYFPFRDPRRNHSDGNGSDLEEQLSSLDGEGNANCGFDVLWDRKSKQVSENACKMIRSRDEAITKLESIVEELIKDLEVLRANRSRGSAFVQDLRERSQRRKIRLVYNLCLELTSQCDYIGYRACLAQETLPFPTEDDHEAVQNANSSETKAGRVRKRSHKRSLTQDAQALQEIIVSGVEKIKKAQSGDGERLERLSALYARLQKYNVEGLASP 454

The following BLAST results are available for this feature:

BLAST of Ggra3343.t1 vs. uniprot

BLAST of Ggra3343.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IG71	1.370e-160	57.27	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 179..199
None	No IPR available	COILS	Coil	Coil	coord: 506..533
None	No IPR available	COILS	Coil	Coil	coord: 304..324
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	COILS	Coil	Coil	coord: 218..238

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000189_pilon	contig	tig00000189_pilon:67148..70366 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra3343.t1	Ggra3343.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000189_pilon 67148..70366 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra3343.t1 ID=Ggra3343.t1|Name=Ggra3343.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1073bp
MMACFKGKGVYAHKSTHIKPIQIQRNIPVDSYEIPTWFEVQDTESLIYQQ
SEILSFQLGQMLHLSQEREHLAFAIDREISLSASKRRSFDVLTKKTSRKI
KKMKAELAHVTNTLEKLLCDKHDTEKRIDLLRLFRVKALTHELVDKMDLE
REDIRAYAEDISKNARMIKHEIQQCNSSISEKEEQLLKSEEVLKKYEAED
QSATSGPSDRSTDVQKLIKLLKKRIESLFECIQELEKLNLLIYFPFTDPR
KLDYDTKASEKTKRLSCFQNLASSVIGRHVLWERKSKQVSENAARFIRTR
DDAIKKLQSLVRELVKDLKGLRAVQSTGSQFVSGIRDKSQCRKVCLVYYL
CQELTNQCDYVAFRACVVQEPVPLLKKDGEQKIVKASDGSINTKKSDRFS
FKQSFSQDTRVLRESIVSGVKRIKKVQSCSVERQRRLAKISAELRQHDVD
GIRSPIIETEWKTVLCDFARSMYYFDHQLSLLWSLATVCDPLNPLMNRPN
IHGMSLEECIKSAERHKNELQKDMNEINQISRRTIRPEDSRLHHTLAEEL
KVSAGIRLSTLQSQINLLDGYIATVRRPIHILFQNHMNQSPLVNSARLIS
AINKVADPTFTDMLYGHKLISYMMEMKVRLDEPLSTIEERSKFFARRFYK
GLLQLDLNDGQKVLVAKILEQAEDLRILTTYDVTGLIIQLSLKDHLDDKF
RRLIRVVDGIYNNFSGRITVLESQLGGIEVCVHRMKEAVLRDKKGALWTS
MVKFGLTILPVAGGIVAAVVNATSRDSQAASAAMLCETPMKMRATVSAVL
SMNSEEQKEFLIPAQARFDLTIQQKQNIEAINLARLALTPKFRERMSANQ
RKKYEEKLKMVWGAPIDKMEEELDSIIVSYLKGSIANIFDVDERELYLDA
HNIIGLEIEAERSADSLLPIEKRRSSSESSDAASDREEPHDLVWWKSDSE
DLKKYGKALMKAVDNKVKRFACRPRNDAFFDTDESNLASDYELFQKSSEL
ALDVFSLKRFERELSRQIELRDEAHFKEVEELDSTIHKSWEVRKRIQAVV
EILASYANEDFMRRSIKQPHLE*