Ggra3335.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3335.t1
Unique NameGgra3335.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length199
Homology
BLAST of Ggra3335.t1 vs. uniprot
Match: A0A2V3IIY6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY6_9FLOR)

HSP 1 Score: 256 bits (653), Expect = 3.700e-84
Identity = 121/191 (63.35%), Postives = 148/191 (77.49%), Query Frame = 0
Query:    2 LGHNLRHAFPHL-HVHXXXXQKDHAPPKYVFSHPTEFHMKHNKHTHAKEIFHVEQTDPEHELYRILRCHDGFKVMDKNDEEIYRAIFDLSDKTMRIRDASTDNIVVTTRQRGHLFSIIQIFNGDGFYGKPFIEVCGALDYELTESETGRVLAKIEQVVKWSEPSSCTVHVAADLNVPLMLLLITSINHITE 191
            L H+LRHA PH+ H+H     K H P + VF HPTEFH+   KHTHAKE+F +++ + EH LY ILRC DG ++ DK+ EE+YR     SD TMRIRDA TD+IV+TTRQRG LFSI+Q+FNGDGFYGKPFIEVC ALDY++TE+E GR+LA +EQVV+WSEPS C+VH+A  LN PL+LLLI SINH  E
Sbjct:    3 LNHHLRHAIPHITHLH----SKTHTPSQIVFDHPTEFHLTLKKHTHAKELFSIKEANSEHALYHILRCQDGLRLTDKHGEELYRTAVSSSDNTMRIRDARTDDIVITTRQRGQLFSIVQVFNGDGFYGKPFIEVCAALDYKVTEAEGGRLLATVEQVVRWSEPSHCSVHIATGLNAPLLLLLIASINHTVE 189          
BLAST of Ggra3335.t1 vs. uniprot
Match: A0A2V3IMC6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC6_9FLOR)

HSP 1 Score: 158 bits (400), Expect = 3.550e-46
Identity = 73/150 (48.67%), Postives = 109/150 (72.67%), Query Frame = 0
Query:   43 KHTHAKEIFHVEQTDPEHELYRILRCHDGFKVMDKNDEEI-YRAIFDLSDKTMRIRDASTDNIVVTTRQRGHLFSIIQIFNGDGFYGKPFIEVCGALDYELTESETGRVLAKIEQVVKWSEPSSCTVHVAADLNVPLMLLLITSINHITE 191
            KHTH K++ H+ + D EH LYRI R H+GFK+ D +  E+ Y+A+ D++   ++I DA ++ +++TTRQ+GHLF I Q+F GD    +P++EVC ALDYEL E ETGRVLA +++VV+++E + C V V   LN P++LLLI++IN + E
Sbjct:    9 KHTHTKQLCHITRADTEHSLYRIHRSHNGFKLFDSHTHELLYKAVIDITLNVVQIVDAKSEQVLLTTRQKGHLFPITQVFTGDNTAVEPYVEVCAALDYELCERETGRVLAVVDRVVRYAERAHCNVCVDTGLNAPVLLLLISTINDVVE 158          
The following BLAST results are available for this feature:
BLAST of Ggra3335.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIY63.700e-8463.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMC63.550e-4648.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:43039..43635 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3335.t1Ggra3335.t1Gracilaria gracilis GNS1m malemRNAtig00000189_pilon 43039..43635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3335.t1 ID=Ggra3335.t1|Name=Ggra3335.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=199bp
MLGHNLRHAFPHLHVHHHHHQKDHAPPKYVFSHPTEFHMKHNKHTHAKEI
FHVEQTDPEHELYRILRCHDGFKVMDKNDEEIYRAIFDLSDKTMRIRDAS
TDNIVVTTRQRGHLFSIIQIFNGDGFYGKPFIEVCGALDYELTESETGRV
LAKIEQVVKWSEPSSCTVHVAADLNVPLMLLLITSINHITENAASASA*
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