Ggra3335.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3335.t1
Unique NameGgra3335.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length199
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:43039..43635 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3335Ggra3335Gracilaria gracilis GNS1m malegenetig00000189_pilon 43039..43635 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3335.t1.stop1Ggra3335.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000189_pilon 43039..43041 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3335.t1.CDS1Ggra3335.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000189_pilon 43039..43635 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3335.t1.exon1Ggra3335.t1.exon1Gracilaria gracilis GNS1m maleexontig00000189_pilon 43039..43635 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3335.t1.start1Ggra3335.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000189_pilon 43633..43635 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3335.t1Ggra3335.t1Gracilaria gracilis GNS1m malepolypeptidetig00000189_pilon 43039..43635 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3335.t1 ID=Ggra3335.t1|Name=Ggra3335.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=199bp
MLGHNLRHAFPHLHVHHHHHQKDHAPPKYVFSHPTEFHMKHNKHTHAKEI
FHVEQTDPEHELYRILRCHDGFKVMDKNDEEIYRAIFDLSDKTMRIRDAS
TDNIVVTTRQRGHLFSIIQIFNGDGFYGKPFIEVCGALDYELTESETGRV
LAKIEQVVKWSEPSSCTVHVAADLNVPLMLLLITSINHITENAASASA*
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spliced messenger RNA

>Ggra3335.t1 ID=Ggra3335.t1|Name=Ggra3335.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=597bp|location=Sequence derived from alignment at tig00000189_pilon:43039..43635- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGGGTCACAATTTGCGCCACGCCTTCCCTCATTTGCACGTTCATCA
TCATCATCATCAGAAAGATCATGCCCCGCCAAAGTATGTCTTCAGTCATC
CCACAGAGTTCCACATGAAGCATAACAAGCACACTCATGCCAAAGAAATC
TTCCATGTGGAACAGACTGACCCGGAGCACGAGCTATACCGAATTCTTCG
CTGTCATGATGGTTTCAAGGTGATGGATAAGAACGATGAAGAGATTTACC
GCGCCATATTTGATCTTTCTGATAAGACAATGAGAATACGTGACGCTAGC
ACCGACAATATTGTCGTCACTACTCGCCAGAGAGGGCATTTGTTCAGTAT
CATCCAGATCTTTAATGGTGATGGCTTTTACGGCAAGCCGTTTATTGAGG
TGTGCGGTGCTTTGGACTACGAGTTGACTGAATCTGAGACTGGCCGCGTT
TTGGCCAAGATTGAGCAAGTCGTTAAATGGTCTGAGCCGTCTTCGTGTAC
TGTTCACGTTGCTGCTGACCTCAACGTACCCTTGATGTTGCTTCTCATCA
CCAGCATCAACCATATTACAGAGAACGCGGCGTCGGCTTCTGCTTAG
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protein sequence of Ggra3335.t1

>Ggra3335.t1 ID=Ggra3335.t1|Name=Ggra3335.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=199bp
MLGHNLRHAFPHLHVHHHHHQKDHAPPKYVFSHPTEFHMKHNKHTHAKEI
FHVEQTDPEHELYRILRCHDGFKVMDKNDEEIYRAIFDLSDKTMRIRDAS
TDNIVVTTRQRGHLFSIIQIFNGDGFYGKPFIEVCGALDYELTESETGRV
LAKIEQVVKWSEPSSCTVHVAADLNVPLMLLLITSINHITENAASASA*
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mRNA from alignment at tig00000189_pilon:43039..43635-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3335.t1 ID=Ggra3335.t1|Name=Ggra3335.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=597bp|location=Sequence derived from alignment at tig00000189_pilon:43039..43635- (Gracilaria gracilis GNS1m male)
ATGTTGGGTCACAATTTGCGCCACGCCTTCCCTCATTTGCACGTTCATCA
TCATCATCATCAGAAAGATCATGCCCCGCCAAAGTATGTCTTCAGTCATC
CCACAGAGTTCCACATGAAGCATAACAAGCACACTCATGCCAAAGAAATC
TTCCATGTGGAACAGACTGACCCGGAGCACGAGCTATACCGAATTCTTCG
CTGTCATGATGGTTTCAAGGTGATGGATAAGAACGATGAAGAGATTTACC
GCGCCATATTTGATCTTTCTGATAAGACAATGAGAATACGTGACGCTAGC
ACCGACAATATTGTCGTCACTACTCGCCAGAGAGGGCATTTGTTCAGTAT
CATCCAGATCTTTAATGGTGATGGCTTTTACGGCAAGCCGTTTATTGAGG
TGTGCGGTGCTTTGGACTACGAGTTGACTGAATCTGAGACTGGCCGCGTT
TTGGCCAAGATTGAGCAAGTCGTTAAATGGTCTGAGCCGTCTTCGTGTAC
TGTTCACGTTGCTGCTGACCTCAACGTACCCTTGATGTTGCTTCTCATCA
CCAGCATCAACCATATTACAGAGAACGCGGCGTCGGCTTCTGCTTAG
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Coding sequence (CDS) from alignment at tig00000189_pilon:43039..43635-

>Ggra3335.t1 ID=Ggra3335.t1|Name=Ggra3335.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=597bp|location=Sequence derived from alignment at tig00000189_pilon:43039..43635- (Gracilaria gracilis GNS1m male)
ATGTTGGGTCACAATTTGCGCCACGCCTTCCCTCATTTGCACGTTCATCA
TCATCATCATCAGAAAGATCATGCCCCGCCAAAGTATGTCTTCAGTCATC
CCACAGAGTTCCACATGAAGCATAACAAGCACACTCATGCCAAAGAAATC
TTCCATGTGGAACAGACTGACCCGGAGCACGAGCTATACCGAATTCTTCG
CTGTCATGATGGTTTCAAGGTGATGGATAAGAACGATGAAGAGATTTACC
GCGCCATATTTGATCTTTCTGATAAGACAATGAGAATACGTGACGCTAGC
ACCGACAATATTGTCGTCACTACTCGCCAGAGAGGGCATTTGTTCAGTAT
CATCCAGATCTTTAATGGTGATGGCTTTTACGGCAAGCCGTTTATTGAGG
TGTGCGGTGCTTTGGACTACGAGTTGACTGAATCTGAGACTGGCCGCGTT
TTGGCCAAGATTGAGCAAGTCGTTAAATGGTCTGAGCCGTCTTCGTGTAC
TGTTCACGTTGCTGCTGACCTCAACGTACCCTTGATGTTGCTTCTCATCA
CCAGCATCAACCATATTACAGAGAACGCGGCGTCGGCTTCTGCTTAG
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