Ggra3333.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3333.t1
Unique NameGgra3333.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length235
Homology
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A2V3IRI3 (26 kDa periplasmic immunogenic protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRI3_9FLOR)

HSP 1 Score: 249 bits (636), Expect = 1.420e-80
Identity = 141/213 (66.20%), Postives = 172/213 (80.75%), Query Frame = 0
Query:   23 SNAQAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQSIPQPQLRQ-SFGALAADASVPIATGELDVQATVFLQFALVD 234
            + +Q +PRTI+VSG G+ SAPPD AT++TGV TTAATAQ ALAAN++QF  VLAVL+EQGIE RDVQT+FF+VNPQF+RGPNGE  GITGY+V+NQVRV+VRD+D LG+ILDALV+AGSN++SGV+FSI ++ E+ + ARA AVADAT  AGVYA AA + VG LIAIS+QSI  P  R  S  A AA   VPIA+GEL V + V LQF LV+
Sbjct:    5 ARSQNIPRTITVSGRGTGSAPPDTATINTGVQTTAATAQEALAANNRQFQSVLAVLSEQGIEDRDVQTSFFNVNPQFRRGPNGEQLGITGYRVSNQVRVIVRDIDKLGQILDALVTAGSNQVSGVSFSIEDNQEITDTARAAAVADATRTAGVYAAAAGISVGRLIAISDQSIQAPLPRAVSLDAGAAGFGVPIASGELQVTSNVNLQFELVN 217          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A2V3IQE7 (26 kDa periplasmic immunogenic protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQE7_9FLOR)

HSP 1 Score: 246 bits (628), Expect = 2.250e-79
Identity = 139/213 (65.26%), Postives = 174/213 (81.69%), Query Frame = 0
Query:   23 SNAQAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQSIPQPQLRQ-SFGALAADASVPIATGELDVQATVFLQFALVD 234
            + +Q +PRTI+VSG G+ SAPPD AT++TGV TTAATAQ ALAAN++QF  VLAVL+EQGIE RDVQT+FF+VNPQF+ GPNGE  GITGYQV+NQVRV+VRD++ LG+ILDALV+AGSN++SGV+FSI ++ E+ + ARA AVADAT  AGV+A AA VKVG LIA+S+QSI  P+    S  A AAD  VPIA+GEL++ + V LQF LV+
Sbjct:    5 AQSQNIPRTITVSGRGTASAPPDTATINTGVETTAATAQEALAANNRQFQSVLAVLSEQGIEDRDVQTSFFNVNPQFRFGPNGEQLGITGYQVSNQVRVIVRDIEKLGQILDALVAAGSNQVSGVSFSIEDNQEITDTARAAAVADATRTAGVFAAAAGVKVGRLIAVSDQSIQAPEPPSFSLQAEAADV-VPIASGELEITSNVNLQFELVN 216          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A2V3IQG5 (26 kDa periplasmic immunogenic protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQG5_9FLOR)

HSP 1 Score: 230 bits (587), Expect = 7.180e-73
Identity = 131/212 (61.79%), Postives = 167/212 (78.77%), Query Frame = 0
Query:   26 QAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQS---IPQPQLRQSFGALAADASVPIATGELDVQATVFLQFALVD 234
            QA+PRTI+VSG GS SAPPD AT++TGV T AATAQ AL AN+QQF QVL V++EQGIE RDVQT+ F+VNPQF+RGPN E   ITGY+V+NQVR++VRDLD LG++LDAL++AGSNR+S V FSI N+ EL   AR  AVADAT  AGV A AA V+VG+LIAI++QS   +P+  +  +FG +  +  VPIATG+L+V ++V LQF L++
Sbjct:   27 QAIPRTITVSGRGSASAPPDTATINTGVSTVAATAQEALTANNQQFQQVLRVISEQGIEDRDVQTSSFNVNPQFERGPNFEIIRITGYEVSNQVRIIVRDLDQLGQVLDALIAAGSNRVSSVGFSIENNKELLKTARTSAVADATRTAGVLAGAAGVQVGKLIAITDQSGSSLPRASIA-AFG-VGGNGGVPIATGQLEVSSSVTLQFELIN 236          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A3E0Q6E1 (SIMPL domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q6E1_9BACT)

HSP 1 Score: 194 bits (493), Expect = 1.130e-58
Identity = 114/226 (50.44%), Postives = 161/226 (71.24%), Query Frame = 0
Query:   12 ALVLFAASVVQSN--AQAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQG-ITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQSIPQPQLRQSFGALAADASVPIATGELDVQATVFLQFALVD 234
            A++L  A+++ +N  A    RTISV+GEG  +APPDMAT+  GVVT +A A  AL +N+   D++++VL EQGI  +++QT+ F+V+PQ++    G  Q  + GY+VTNQ+RV V DL  LG+ILDALV+AGSN +SG++F I +   L N AR  AVADA SRA +YAQ+A V +G+++ ISEQ++  PQ ++     AADASVPIATGE +++ATV + FAL D
Sbjct:    8 AIILANAAILVANGFAAETQRTISVTGEGRATAPPDMATIRAGVVTQSAKASEALTSNNDAMDEIMSVLEEQGIAPKNIQTSNFNVSPQYKHDDQGRRQPEVVGYRVTNQLRVDVHDLPKLGKILDALVAAGSNELSGISFGINDPTGLLNEARKRAVADAHSRAELYAQSAGVALGKVLTISEQTVRTPQPQRLAARKAADASVPIATGEQELRATVDMVFALDD 233          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A2E7EHA8 (SIMPL domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7EHA8_9PLAN)

HSP 1 Score: 182 bits (463), Expect = 3.190e-54
Identity = 100/210 (47.62%), Postives = 150/210 (71.43%), Query Frame = 0
Query:   26 QAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGE-DQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQSIPQPQLRQSFGALAADASVPIATGELDVQATVFLQFALVD 234
            QA+PRTIS++G GS ++PPDMAT++TGVVT    A  A+ AN++   +++A L  Q I ++D+QT+ F V+PQ+ R   G   Q I GY+V+NQVRVV+R+L  LG++LD LVS GSNR+SG++F I +   + N AR  A+ADA S+A +YAQA  +KVG+++++SE S+  P+ +    A  AD++VPIA+GE ++ AT+ + FA+ D
Sbjct:   20 QALPRTISITGNGSATSPPDMATINTGVVTQGKNAADAMKANNEIMAKLMAALKAQKIPAKDIQTSDFSVSPQYARDDRGRTQQEIVGYRVSNQVRVVIRNLPELGKVLDTLVSTGSNRVSGISFGITDSDGILNEARNNAIADARSKANLYAQALGIKVGKVVSVSESSVIAPRPQFFARAAMADSAVPIASGEQELTATIDVVFAIAD 229          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A7W0M898 (SIMPL domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0M898_9PLAN)

HSP 1 Score: 170 bits (431), Expect = 2.610e-49
Identity = 107/223 (47.98%), Postives = 148/223 (66.37%), Query Frame = 0
Query:   17 AASVVQSN---AQAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQG-ITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQSIPQPQ-LRQSFGALAADASVPIATGELDVQATVFLQFALVD 234
            AASV+ +    A+ VPR +SV+GEG+  APPDMATV TGVVT AA A+ ALAANS+  + +LA L  + +  +DVQT+ F V P +     G  +  I+GYQV NQVRV VR+LD LG +LD+LV AGSN +SGV+F +     + + AR  AV DA  RA +YA+AA V++G++  ISEQ+I  PQ +  S G  A  ++VP+A GE +   +V +++AL D
Sbjct:   12 AASVLWTGFVRAEEVPRAVSVTGEGTAVAPPDMATVHTGVVTQAAAAKEALAANSKAMESILAALKTRNVAVKDVQTSQFSVQPMYDHDERGLTRPEISGYQVMNQVRVRVRELDRLGEVLDSLVQAGSNEVSGVSFGVAEPKGVFDEARRDAVRDARRRAELYAEAAGVRLGKVRRISEQTIRFPQPIAMSRGFAAESSAVPVAPGEEEFHVSVDVEYALED 234          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A3M1JZB6 (DUF541 domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JZB6_9PROT)

HSP 1 Score: 164 bits (415), Expect = 3.400e-47
Identity = 95/205 (46.34%), Postives = 143/205 (69.76%), Query Frame = 0
Query:   30 RTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQSI--PQPQLRQSFGALAADASVPIATGELDVQATVFLQFAL 232
            R +S++G G+VSA PD A +STGVV+ AA+A AALAAN++   +++A L  QG+ ++D+QT  F V P ++R  +G    ITGY+VTN VR+ VRDL  LG ILD +V+ GSNRI+G+ F++ +  +LR+ AR  AVADAT +A +YA++A V++G++++ISE +   P+P  R    A  A A+VP+ +GE  +Q  V + +AL
Sbjct:    9 RRLSLTGTGTVSAAPDKAHISTGVVSDAASASAALAANNRAMTRIIAELKTQGLAAKDIQTANFSVQPLYRRFKDGRPAEITGYRVTNSVRITVRDLPRLGTILDKVVTLGSNRINGIEFALDDAEKLRDAARRKAVADATRKARLYAESAGVRLGDVLSISETTAYPPRPVYRARLQAAPA-AAVPVQSGEQSIQVQVNMSWAL 212          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A1G7UM59 (Uncharacterized protein n=1 Tax=Pelagibacterium luteolum TaxID=440168 RepID=A0A1G7UM59_9HYPH)

HSP 1 Score: 157 bits (398), Expect = 2.600e-44
Identity = 94/231 (40.69%), Postives = 141/231 (61.04%), Query Frame = 0
Query:   11 FALVLFAASVVQSNAQAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGIT------GYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISE---QSIPQPQLRQSFGALAADASVPIATGELDVQATVFLQFAL 232
            F+ ++ A  +    + A+  TI+++G G V A PDMAT++TGV T A TA  AL ANS+    +++ L E G+E RD+QT+ F V PQ+      +D G T      GYQV+N V ++VRDL+ LG +LD  V+ G+N I+G++F + +  EL  +AR LAVADA ++A  YA AA+  +G + +I E   Q  PQP  R +   +AAD+SVP+  GEL    T  + +++
Sbjct:    4 FSKIIPATMLALMVSPALAETITLTGTGVVRAVPDMATINTGVTTQAETALEALDANSEAMADLVSALREAGLEDRDIQTSDFTVTPQYVYSDQRDDSGYTLPPEIQGYQVSNSVTIIVRDLEGLGSVLDRAVTVGANTINGISFDVEDASELETKARELAVADAIAKAETYAVAADFTLGSIESIREADQQMPPQPMYRAAMAEMAADSSVPVEAGELAFSVTTTISWSI 234          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A2E1EDS5 (Uncharacterized protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2E1EDS5_9HYPH)

HSP 1 Score: 157 bits (398), Expect = 3.170e-44
Identity = 106/239 (44.35%), Postives = 149/239 (62.34%), Query Frame = 0
Query:    2 NSTTKNIFAFALVLFAASVVQSNA------QAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGIT----GYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQ--SIPQPQLRQSFGALAADASVPIATGELDVQATVFL 228
             +T++++FA  ++  AAS+  + A      Q  PRTI+++GEG VSA PD+A V TGVVT   TA  ALAAN+   +QV A L E GIE +D+QT+ F V P +++    +D+  T    GY+V NQ+ V VRDL  LG ILD +V+ GSN++SG+ FSI     L N AR  AV +A  +A +YA AA V +GE+++ISE   S+PQP   +     A  +SVP+A GE  + A+V L
Sbjct:    3 TATSRSLFALPVLALAASLAFTGAAQATEPQEPPRTITITGEGEVSAAPDIAYVETGVVTEGKTAAEALAANTAAMEQVFAGLGEAGIEKKDMQTSQFSVYPVYEQVKPEDDRPHTPKIGGYRVQNQLTVTVRDLTALGGILDKVVTLGSNQLSGIRFSIDKPEPLVNEARKDAVKNALEKAKLYAGAAGVALGEIMSISENGVSMPQPYYAKDMMMRAEASSVPVAAGEQTLSASVTL 241          
BLAST of Ggra3333.t1 vs. uniprot
Match: A0A849E6U0 (SIMPL domain-containing protein n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849E6U0_9HYPH)

HSP 1 Score: 157 bits (397), Expect = 4.470e-44
Identity = 99/230 (43.04%), Postives = 150/230 (65.22%), Query Frame = 0
Query:    8 IFAFALVLFAASVV------QSNAQAVPRTISVSGEGSVSAPPDMATVSTGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQ---RGPNGEDQG--ITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISE---QSIPQPQLRQSFGALAADASVPIATGELDVQ 223
            I AFA V+ AA+++      QS  Q   RT+S++G+G V + PD+A +S GVV+ A TA+ AL  N++    VL  +   G+ S+D+QT+ F V P+++   R  +GE +   ITGY V+N V V+ RDL  LG +LDA+VS+G N+++G++FSI     LRN AR +AVA+A +RA +YA+AA V +G++++ISE   Q  PQP+ R++    AA  +VPIA G+  +Q
Sbjct:    7 ILAFAGVVSAAALLASPAFAQSTPQVAQRTLSLTGQGEVKSAPDIAVISAGVVSEAKTAREALTLNNEAMASVLQTIEAAGVASKDIQTSSFSVQPKYKYTKRASSGEQEPPRITGYTVSNSVTVIARDLAKLGPVLDAVVSSGVNQMNGLSFSIAEPEPLRNEARKMAVAEARTRAEMYAEAAGVSLGKILSISEAGGQRPPQPEYRRAALQSAAADAVPIAQGQQSIQ 236          
The following BLAST results are available for this feature:
BLAST of Ggra3333.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRI31.420e-8066.2026 kDa periplasmic immunogenic protein n=1 Tax=Gra... [more]
A0A2V3IQE72.250e-7965.2626 kDa periplasmic immunogenic protein n=1 Tax=Gra... [more]
A0A2V3IQG57.180e-7361.7926 kDa periplasmic immunogenic protein n=1 Tax=Gra... [more]
A0A3E0Q6E11.130e-5850.44SIMPL domain-containing protein n=1 Tax=Planctomyc... [more]
A0A2E7EHA83.190e-5447.62SIMPL domain-containing protein n=1 Tax=Planctomyc... [more]
A0A7W0M8982.610e-4947.98SIMPL domain-containing protein n=1 Tax=Planctomyc... [more]
A0A3M1JZB63.400e-4746.34DUF541 domain-containing protein (Fragment) n=1 Ta... [more]
A0A1G7UM592.600e-4440.69Uncharacterized protein n=1 Tax=Pelagibacterium lu... [more]
A0A2E1EDS53.170e-4444.35Uncharacterized protein n=2 Tax=Hyphomicrobiales T... [more]
A0A849E6U04.470e-4443.04SIMPL domain-containing protein n=1 Tax=Andersenie... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.110.170Protein of unknown function (DUF541), domain 1coord: 34..230
e-value: 5.8E-62
score: 211.1
NoneNo IPR availableGENE3D3.30.70.2970Protein of unknown function (DUF541), domain 2coord: 44..152
e-value: 5.8E-62
score: 211.1
NoneNo IPR availablePANTHERPTHR34387:SF1PERIPLASMIC IMMUNOGENIC PROTEIN-RELATEDcoord: 5..232
NoneNo IPR availablePANTHERPTHR34387SLR1258 PROTEINcoord: 5..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..234
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
IPR007497Protein of unknown function DUF541PFAMPF04402SIMPLcoord: 32..230
e-value: 6.5E-45
score: 153.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:35413..36117 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3333.t1Ggra3333.t1Gracilaria gracilis GNS1m malemRNAtig00000189_pilon 35413..36117 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3333.t1 ID=Ggra3333.t1|Name=Ggra3333.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=235bp
MNSTTKNIFAFALVLFAASVVQSNAQAVPRTISVSGEGSVSAPPDMATVS
TGVVTTAATAQAALAANSQQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQ
RGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFS
IGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELIAISEQSIPQPQL
RQSFGALAADASVPIATGELDVQATVFLQFALVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007497DUF541