Ggra9053.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9053.t1
Unique NameGgra9053.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length234
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:48820..49521 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9053Ggra9053Gracilaria gracilis GNS1m malegenetig00000176_pilon 48820..49521 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9053.t1.stop1Ggra9053.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000176_pilon 48820..48822 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9053.t1.CDS1Ggra9053.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000176_pilon 48820..49521 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9053.t1.exon1Ggra9053.t1.exon1Gracilaria gracilis GNS1m maleexontig00000176_pilon 48820..49521 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9053.t1.start1Ggra9053.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000176_pilon 49519..49521 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9053.t1Ggra9053.t1Gracilaria gracilis GNS1m malepolypeptidetig00000176_pilon 48820..49521 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9053.t1 ID=Ggra9053.t1|Name=Ggra9053.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=234bp
MPSRRVNVFARSDGSCLHDVIWQPQSDRPRPAAHHPPTQITADKIWPIIH
NFMSLSREVDGGPLRRLVFRNPQDYAPTVRKFDPVVQPAEKSIAPVVIHV
LSDTRFVVTVTEQLPDYSLFDQSPYSSAFSLGEFCETILDLLRKAHAAFV
AAQSTVAEPGRDDAPSSPLAQPSATSHDSAVRSANSKEASSKQVQEDVDT
LRKVVEQSTIAEMIDNTMKLVQFAQSTRTERVT*
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spliced messenger RNA

>Ggra9053.t1 ID=Ggra9053.t1|Name=Ggra9053.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=702bp|location=Sequence derived from alignment at tig00000176_pilon:48820..49521- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCTCTCGTCGCGTTAACGTCTTCGCGCGTTCCGACGGCTCATGTCT
CCACGATGTCATCTGGCAGCCGCAGTCCGACCGACCCCGCCCGGCCGCGC
ACCATCCGCCCACACAAATCACCGCCGACAAGATCTGGCCCATCATCCAC
AACTTCATGAGCCTATCGCGAGAGGTTGACGGCGGCCCACTCCGTCGCCT
CGTATTCCGCAATCCGCAAGATTACGCTCCCACCGTCAGAAAGTTCGACC
CGGTCGTGCAGCCAGCCGAGAAGTCGATTGCGCCCGTCGTCATACACGTG
CTCTCCGACACTCGCTTCGTCGTCACCGTCACGGAGCAACTGCCCGACTA
CAGTCTGTTCGATCAATCGCCGTATTCGTCCGCCTTCTCTTTAGGCGAGT
TTTGCGAGACCATCCTCGATCTGCTACGAAAGGCGCATGCAGCGTTCGTC
GCCGCGCAATCTACTGTGGCAGAGCCAGGTCGCGATGACGCGCCCTCCTC
ACCGCTTGCGCAGCCGTCGGCTACATCGCATGATTCCGCAGTACGCAGCG
CCAACTCAAAGGAAGCCAGCTCCAAGCAAGTGCAGGAAGATGTAGATACT
CTACGCAAGGTTGTGGAGCAAAGCACAATCGCTGAGATGATCGACAACAC
AATGAAGCTAGTGCAATTCGCACAGTCAACACGCACAGAAAGAGTGACAT
GA
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protein sequence of Ggra9053.t1

>Ggra9053.t1 ID=Ggra9053.t1|Name=Ggra9053.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=234bp
MPSRRVNVFARSDGSCLHDVIWQPQSDRPRPAAHHPPTQITADKIWPIIH
NFMSLSREVDGGPLRRLVFRNPQDYAPTVRKFDPVVQPAEKSIAPVVIHV
LSDTRFVVTVTEQLPDYSLFDQSPYSSAFSLGEFCETILDLLRKAHAAFV
AAQSTVAEPGRDDAPSSPLAQPSATSHDSAVRSANSKEASSKQVQEDVDT
LRKVVEQSTIAEMIDNTMKLVQFAQSTRTERVT*
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mRNA from alignment at tig00000176_pilon:48820..49521-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9053.t1 ID=Ggra9053.t1|Name=Ggra9053.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=702bp|location=Sequence derived from alignment at tig00000176_pilon:48820..49521- (Gracilaria gracilis GNS1m male)
ATGCCCTCTCGTCGCGTTAACGTCTTCGCGCGTTCCGACGGCTCATGTCT
CCACGATGTCATCTGGCAGCCGCAGTCCGACCGACCCCGCCCGGCCGCGC
ACCATCCGCCCACACAAATCACCGCCGACAAGATCTGGCCCATCATCCAC
AACTTCATGAGCCTATCGCGAGAGGTTGACGGCGGCCCACTCCGTCGCCT
CGTATTCCGCAATCCGCAAGATTACGCTCCCACCGTCAGAAAGTTCGACC
CGGTCGTGCAGCCAGCCGAGAAGTCGATTGCGCCCGTCGTCATACACGTG
CTCTCCGACACTCGCTTCGTCGTCACCGTCACGGAGCAACTGCCCGACTA
CAGTCTGTTCGATCAATCGCCGTATTCGTCCGCCTTCTCTTTAGGCGAGT
TTTGCGAGACCATCCTCGATCTGCTACGAAAGGCGCATGCAGCGTTCGTC
GCCGCGCAATCTACTGTGGCAGAGCCAGGTCGCGATGACGCGCCCTCCTC
ACCGCTTGCGCAGCCGTCGGCTACATCGCATGATTCCGCAGTACGCAGCG
CCAACTCAAAGGAAGCCAGCTCCAAGCAAGTGCAGGAAGATGTAGATACT
CTACGCAAGGTTGTGGAGCAAAGCACAATCGCTGAGATGATCGACAACAC
AATGAAGCTAGTGCAATTCGCACAGTCAACACGCACAGAAAGAGTGACAT
GA
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Coding sequence (CDS) from alignment at tig00000176_pilon:48820..49521-

>Ggra9053.t1 ID=Ggra9053.t1|Name=Ggra9053.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=702bp|location=Sequence derived from alignment at tig00000176_pilon:48820..49521- (Gracilaria gracilis GNS1m male)
ATGCCCTCTCGTCGCGTTAACGTCTTCGCGCGTTCCGACGGCTCATGTCT
CCACGATGTCATCTGGCAGCCGCAGTCCGACCGACCCCGCCCGGCCGCGC
ACCATCCGCCCACACAAATCACCGCCGACAAGATCTGGCCCATCATCCAC
AACTTCATGAGCCTATCGCGAGAGGTTGACGGCGGCCCACTCCGTCGCCT
CGTATTCCGCAATCCGCAAGATTACGCTCCCACCGTCAGAAAGTTCGACC
CGGTCGTGCAGCCAGCCGAGAAGTCGATTGCGCCCGTCGTCATACACGTG
CTCTCCGACACTCGCTTCGTCGTCACCGTCACGGAGCAACTGCCCGACTA
CAGTCTGTTCGATCAATCGCCGTATTCGTCCGCCTTCTCTTTAGGCGAGT
TTTGCGAGACCATCCTCGATCTGCTACGAAAGGCGCATGCAGCGTTCGTC
GCCGCGCAATCTACTGTGGCAGAGCCAGGTCGCGATGACGCGCCCTCCTC
ACCGCTTGCGCAGCCGTCGGCTACATCGCATGATTCCGCAGTACGCAGCG
CCAACTCAAAGGAAGCCAGCTCCAAGCAAGTGCAGGAAGATGTAGATACT
CTACGCAAGGTTGTGGAGCAAAGCACAATCGCTGAGATGATCGACAACAC
AATGAAGCTAGTGCAATTCGCACAGTCAACACGCACAGAAAGAGTGACAT
GA
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