Ggra9062.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9062.t1
Unique NameGgra9062.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length381
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:68692..69834 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9062Ggra9062Gracilaria gracilis GNS1m malegenetig00000176_pilon 68692..69834 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9062.t1.stop1Ggra9062.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000176_pilon 68692..68694 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9062.t1.CDS1Ggra9062.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000176_pilon 68692..69834 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9062.t1.exon1Ggra9062.t1.exon1Gracilaria gracilis GNS1m maleexontig00000176_pilon 68692..69834 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9062.t1.start1Ggra9062.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000176_pilon 69832..69834 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9062.t1Ggra9062.t1Gracilaria gracilis GNS1m malepolypeptidetig00000176_pilon 68692..69834 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9062.t1 ID=Ggra9062.t1|Name=Ggra9062.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=381bp
MADVGIIEDNIVEAGYNPNKANAKRSNNFRCSKGGRQDLSAYNAYETVDP
DHEYAELGIEKFNDAVSAGKSVIGGVTLRNNFVERLIDMSVVVHEGRVNM
LEMRESLPNMEGLMNFLVYYGLAAQAFETVVSTTYNRNLNGPFQKLKAFR
YAGIMMPNWVANMIASIREFETPEGIVSVKLIEQLAINWAGRAVSAWCDI
VSERMHGLMNCSIDEQRFYFYNSSDPDQDLLSYMEMHHPEALGRIRINVD
ANNQLDVGVIWNADFAGTLALVSNEALSPMPDNIRNMRRAYLTLRLAGFA
DWDDHAVQMDFLNIGLGVSNGYNLTVLAQDISPVGAYYQSRFGNVMSKLW
KCKSFKPSKSGASSQLVNGDSGTDIDNKYG*
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spliced messenger RNA

>Ggra9062.t1 ID=Ggra9062.t1|Name=Ggra9062.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1143bp|location=Sequence derived from alignment at tig00000176_pilon:68692..69834- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGACGTTGGTATCATTGAAGATAATATTGTTGAGGCTGGGTATAA
TCCGAACAAGGCTAACGCTAAGAGATCAAATAATTTTAGATGTTCTAAGG
GGGGAAGGCAAGATTTGTCGGCTTACAACGCTTATGAAACGGTTGATCCT
GATCATGAGTATGCAGAGCTTGGTATTGAGAAGTTTAATGATGCTGTTTC
TGCCGGGAAATCTGTTATTGGAGGGGTTACTCTAAGGAATAATTTCGTTG
AAAGGCTGATTGATATGAGTGTTGTTGTACATGAAGGTCGAGTGAATATG
TTGGAAATGAGAGAAAGTCTCCCAAATATGGAAGGGTTGATGAATTTCTT
AGTTTATTATGGACTTGCTGCGCAAGCTTTCGAAACTGTAGTTTCAACTA
CGTACAATCGTAATCTGAATGGACCGTTTCAGAAGCTGAAGGCTTTTCGA
TATGCCGGAATTATGATGCCAAATTGGGTGGCTAATATGATTGCTAGTAT
TAGAGAGTTCGAAACACCAGAAGGTATTGTCTCTGTGAAGCTCATTGAAC
AGTTGGCGATTAATTGGGCTGGTCGAGCGGTTAGTGCTTGGTGCGATATT
GTAAGCGAAAGGATGCATGGTTTAATGAATTGTTCCATTGACGAACAGAG
GTTCTATTTCTATAATTCTTCAGATCCAGATCAAGACTTGTTGTCTTATA
TGGAGATGCATCACCCGGAGGCGCTTGGAAGGATCCGAATTAATGTGGAT
GCTAATAATCAACTTGATGTTGGGGTTATTTGGAATGCTGATTTTGCTGG
AACTTTAGCTTTAGTGAGTAATGAAGCTTTATCGCCAATGCCGGATAACA
TTAGGAATATGAGACGTGCGTACTTAACTCTGCGACTGGCAGGATTTGCC
GATTGGGATGATCATGCTGTGCAGATGGATTTCTTGAACATTGGTCTTGG
GGTTTCTAACGGTTATAATTTAACTGTGTTGGCGCAAGACATTTCCCCTG
TTGGTGCTTACTACCAAAGCAGGTTTGGTAATGTGATGAGTAAGTTATGG
AAGTGCAAAAGTTTTAAACCCAGCAAATCTGGAGCGTCATCTCAACTTGT
TAATGGTGATTCAGGTACTGATATCGACAATAAATATGGATAA
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protein sequence of Ggra9062.t1

>Ggra9062.t1 ID=Ggra9062.t1|Name=Ggra9062.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=381bp
MADVGIIEDNIVEAGYNPNKANAKRSNNFRCSKGGRQDLSAYNAYETVDP
DHEYAELGIEKFNDAVSAGKSVIGGVTLRNNFVERLIDMSVVVHEGRVNM
LEMRESLPNMEGLMNFLVYYGLAAQAFETVVSTTYNRNLNGPFQKLKAFR
YAGIMMPNWVANMIASIREFETPEGIVSVKLIEQLAINWAGRAVSAWCDI
VSERMHGLMNCSIDEQRFYFYNSSDPDQDLLSYMEMHHPEALGRIRINVD
ANNQLDVGVIWNADFAGTLALVSNEALSPMPDNIRNMRRAYLTLRLAGFA
DWDDHAVQMDFLNIGLGVSNGYNLTVLAQDISPVGAYYQSRFGNVMSKLW
KCKSFKPSKSGASSQLVNGDSGTDIDNKYG*
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mRNA from alignment at tig00000176_pilon:68692..69834-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9062.t1 ID=Ggra9062.t1|Name=Ggra9062.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1143bp|location=Sequence derived from alignment at tig00000176_pilon:68692..69834- (Gracilaria gracilis GNS1m male)
ATGGCAGACGTTGGTATCATTGAAGATAATATTGTTGAGGCTGGGTATAA
TCCGAACAAGGCTAACGCTAAGAGATCAAATAATTTTAGATGTTCTAAGG
GGGGAAGGCAAGATTTGTCGGCTTACAACGCTTATGAAACGGTTGATCCT
GATCATGAGTATGCAGAGCTTGGTATTGAGAAGTTTAATGATGCTGTTTC
TGCCGGGAAATCTGTTATTGGAGGGGTTACTCTAAGGAATAATTTCGTTG
AAAGGCTGATTGATATGAGTGTTGTTGTACATGAAGGTCGAGTGAATATG
TTGGAAATGAGAGAAAGTCTCCCAAATATGGAAGGGTTGATGAATTTCTT
AGTTTATTATGGACTTGCTGCGCAAGCTTTCGAAACTGTAGTTTCAACTA
CGTACAATCGTAATCTGAATGGACCGTTTCAGAAGCTGAAGGCTTTTCGA
TATGCCGGAATTATGATGCCAAATTGGGTGGCTAATATGATTGCTAGTAT
TAGAGAGTTCGAAACACCAGAAGGTATTGTCTCTGTGAAGCTCATTGAAC
AGTTGGCGATTAATTGGGCTGGTCGAGCGGTTAGTGCTTGGTGCGATATT
GTAAGCGAAAGGATGCATGGTTTAATGAATTGTTCCATTGACGAACAGAG
GTTCTATTTCTATAATTCTTCAGATCCAGATCAAGACTTGTTGTCTTATA
TGGAGATGCATCACCCGGAGGCGCTTGGAAGGATCCGAATTAATGTGGAT
GCTAATAATCAACTTGATGTTGGGGTTATTTGGAATGCTGATTTTGCTGG
AACTTTAGCTTTAGTGAGTAATGAAGCTTTATCGCCAATGCCGGATAACA
TTAGGAATATGAGACGTGCGTACTTAACTCTGCGACTGGCAGGATTTGCC
GATTGGGATGATCATGCTGTGCAGATGGATTTCTTGAACATTGGTCTTGG
GGTTTCTAACGGTTATAATTTAACTGTGTTGGCGCAAGACATTTCCCCTG
TTGGTGCTTACTACCAAAGCAGGTTTGGTAATGTGATGAGTAAGTTATGG
AAGTGCAAAAGTTTTAAACCCAGCAAATCTGGAGCGTCATCTCAACTTGT
TAATGGTGATTCAGGTACTGATATCGACAATAAATATGGATAA
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Coding sequence (CDS) from alignment at tig00000176_pilon:68692..69834-

>Ggra9062.t1 ID=Ggra9062.t1|Name=Ggra9062.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1143bp|location=Sequence derived from alignment at tig00000176_pilon:68692..69834- (Gracilaria gracilis GNS1m male)
ATGGCAGACGTTGGTATCATTGAAGATAATATTGTTGAGGCTGGGTATAA
TCCGAACAAGGCTAACGCTAAGAGATCAAATAATTTTAGATGTTCTAAGG
GGGGAAGGCAAGATTTGTCGGCTTACAACGCTTATGAAACGGTTGATCCT
GATCATGAGTATGCAGAGCTTGGTATTGAGAAGTTTAATGATGCTGTTTC
TGCCGGGAAATCTGTTATTGGAGGGGTTACTCTAAGGAATAATTTCGTTG
AAAGGCTGATTGATATGAGTGTTGTTGTACATGAAGGTCGAGTGAATATG
TTGGAAATGAGAGAAAGTCTCCCAAATATGGAAGGGTTGATGAATTTCTT
AGTTTATTATGGACTTGCTGCGCAAGCTTTCGAAACTGTAGTTTCAACTA
CGTACAATCGTAATCTGAATGGACCGTTTCAGAAGCTGAAGGCTTTTCGA
TATGCCGGAATTATGATGCCAAATTGGGTGGCTAATATGATTGCTAGTAT
TAGAGAGTTCGAAACACCAGAAGGTATTGTCTCTGTGAAGCTCATTGAAC
AGTTGGCGATTAATTGGGCTGGTCGAGCGGTTAGTGCTTGGTGCGATATT
GTAAGCGAAAGGATGCATGGTTTAATGAATTGTTCCATTGACGAACAGAG
GTTCTATTTCTATAATTCTTCAGATCCAGATCAAGACTTGTTGTCTTATA
TGGAGATGCATCACCCGGAGGCGCTTGGAAGGATCCGAATTAATGTGGAT
GCTAATAATCAACTTGATGTTGGGGTTATTTGGAATGCTGATTTTGCTGG
AACTTTAGCTTTAGTGAGTAATGAAGCTTTATCGCCAATGCCGGATAACA
TTAGGAATATGAGACGTGCGTACTTAACTCTGCGACTGGCAGGATTTGCC
GATTGGGATGATCATGCTGTGCAGATGGATTTCTTGAACATTGGTCTTGG
GGTTTCTAACGGTTATAATTTAACTGTGTTGGCGCAAGACATTTCCCCTG
TTGGTGCTTACTACCAAAGCAGGTTTGGTAATGTGATGAGTAAGTTATGG
AAGTGCAAAAGTTTTAAACCCAGCAAATCTGGAGCGTCATCTCAACTTGT
TAATGGTGATTCAGGTACTGATATCGACAATAAATATGGATAA
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