Ggra9098.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9098.t1
Unique Name	Ggra9098.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	363

Homology

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BLAST of Ggra9098.t1 vs. uniprot
Match: A0A2V3IIE9 (Muscle M-line assembly protein unc-89 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIE9_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 8.010e-20
Identity = 181/532 (34.02%), Postives = 208/532 (39.10%), Query Frame = 0

Query:    1 MASVALSNLPWWTSDADVEALCARAHAPARRAIGAVRFAVDAHSGKSLGRVAVALSSRQVAEPLRAALAA-----------------------------------------------------------------------DPPP---------------------------------------PASPSAPPDARA---------------------------------------------------RRGKGRETLIINKYGDRVLVYRPDQDKEDPRRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RSAERSESPRRFSPERXXXXXXXXXRDGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDRHRERRXXXTRERSPFNGSSRRRSRSHSPDWSEEHRSSKRRRHGHYESSQWYRG--------SDSAKHDDTPVKSRAEDXXXXXXXXXXXXXXXXXRAHANANQQASSSVGDKADMPSDRRNSRRQRSGRR 362
            MA+VALSNL WWT+DA+V+AL  RAHA A RA+  VRFA  A SGKSLGRVA+ALS+  +AEPLRAALAA                                                                        PPP                                       P +PS  P +R                                                    RR  GRETL+INKYG+RVLV+RPD D E+ RR+ +                          XXXXXXXXXXX   + RS +RS SP RFSPER   XXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXX                                                P+WS++ R+SKRR                     S S KHDD P KSR  +                 RAH+NANQQ  +S  DK+D+ SDRRNSRRQRSGRR
Sbjct:    1 MAAVALSNLGWWTTDAEVDALVQRAHAAAHRALTDVRFATHAASGKSLGRVAIALSAADLAEPLRAALAALHPXXXXXXADLPVVAAVLPPDHVDAFLXXXXXXSPVAAXXXXAAPRFPHHAAMPPFPPRIFPHTLPMPRGIPPPAFMPPFMWLPPNPSQQQAPRPAAPEQQRAHAPPQRQLPSPRAPSKSPSSRXXXXXXXXXSDASPPRPAPHNRRRSPRRXXXXXXXXXXXXXXXXXXXXXXXXRRAAGRETLLINKYGERVLVFRPDNDNEEVRRKSTSRRTTRESSDEYDDSTAKLNIPEEVKXXXXXXXXXXXHSRHARSPDRSVSPPRFSPERDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------PEWSDDRRASKRRXXXXXXXXXXXXXXXXXXXATSVSPKHDDMPSKSRPGEDDEPPRRARKRGGRSRRRAHSNANQQNCASAADKSDIQSDRRNSRRQRSGRR 484

The following BLAST results are available for this feature:

BLAST of Ggra9098.t1 vs. uniprot

BLAST of Ggra9098.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IIE9	8.010e-20	34.02	Muscle M-line assembly protein unc-89 n=1 Tax=Grac...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..276

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000176_pilon	contig	tig00000176_pilon:182629..184410 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9098.t1	Ggra9098.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000176_pilon 182629..184410 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9098.t1 ID=Ggra9098.t1|Name=Ggra9098.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=363bp
MASVALSNLPWWTSDADVEALCARAHAPARRAIGAVRFAVDAHSGKSLGR
VAVALSSRQVAEPLRAALAADPPPPASPSAPPDARARRGKGRETLIINKY
GDRVLVYRPDQDKEDPRRRPSSRRSARESSDEFETTAKLNIPEEVKERLR
ERMQNERHSQHNRSAERSESPRRFSPERERQRERDRSRDGRGRDDRGRDD
RGRDDRERDDRERDDRGRDDRGRDDRGRDDRGRDDRGRDRHRERRRDRTR
ERSPFNGSSRRRSRSHSPDWSEEHRSSKRRRHGHYESSQWYRGSDSAKHD
DTPVKSRAEDEEPPPRRTRRRGGRSRRRAHANANQQASSSVGDKADMPSD
RRNSRRQRSGRR*