Ggra9065.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9065.t1
Unique NameGgra9065.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length195
Homology
BLAST of Ggra9065.t1 vs. uniprot
Match: A0A2V3IRW2 (40S ribosomal protein S5 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3IRW2_9FLOR)

HSP 1 Score: 370 bits (950), Expect = 2.060e-129
Identity = 188/194 (96.91%), Postives = 190/194 (97.94%), Query Frame = 0
Query:    1 MAVVSEVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            MA VSEVKLFNRWSFE V VEDICL+DYIAV QRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLV+AVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR
Sbjct:    1 MAAVSEVKLFNRWSFEGVEVEDICLSDYIAVKQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVQAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194          
BLAST of Ggra9065.t1 vs. uniprot
Match: R7Q4U9 (Ribosomal_S7 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4U9_CHOCR)

HSP 1 Score: 369 bits (946), Expect = 7.280e-128
Identity = 185/194 (95.36%), Postives = 190/194 (97.94%), Query Frame = 0
Query:    1 MAVVSEVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            M  V+E+KLFNRWSFEDVRVED+CL DYIAVNQ+ AVYLPHTAGRYN+KRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR
Sbjct:   62 MTTVNEIKLFNRWSFEDVRVEDMCLADYIAVNQKHAVYLPHTAGRYNSKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 255          
BLAST of Ggra9065.t1 vs. uniprot
Match: A0A5J4Z3W9 (40S ribosomal protein S5 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W9_PORPP)

HSP 1 Score: 327 bits (838), Expect = 2.440e-112
Identity = 164/194 (84.54%), Postives = 176/194 (90.72%), Query Frame = 0
Query:    1 MAVVSEVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            MA  +EVKLFN+WSFEDV V DI L DYIAV Q  AVYLPHTAGRYN KRF KA CPIVERLVC++MMHGRNNGKK+MA RIVKH FEIIHLLTD+NP+QVLV+AVVNSGPREDSTRIGSAGTVRRQAVDVSP+RR+NVA+ LL TGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDE+ERVAK  R
Sbjct:    1 MAAATEVKLFNKWSFEDVDVSDIALADYIAVKQNKAVYLPHTAGRYNKKRFHKAGCPIVERLVCAMMMHGRNNGKKVMATRIVKHTFEIIHLLTDENPVQVLVQAVVNSGPREDSTRIGSAGTVRRQAVDVSPLRRVNVAVALLTTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKGCR 194          
BLAST of Ggra9065.t1 vs. uniprot
Match: M2VXU3 (40S ribosomal protein S5e n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXU3_GALSU)

HSP 1 Score: 322 bits (825), Expect = 2.100e-110
Identity = 160/191 (83.77%), Postives = 178/191 (93.19%), Query Frame = 0
Query:    4 VSEVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            ++EVKLFNRWSFEDV V D+ L+DYIAV Q+ AVYLPHTAGRY  KRFRKAQCPIVERLV SLMMHGRNNGKK+MAVRIVK  FEIIHLLTD NP+QV V+AV+N+GPREDSTRIGSAGTVRRQAVDVSP+RR+NVALYL+ TGAREA+FRS+KTI+ECLADE+INA+KGSSNSYAIKKKDEVERVAKANR
Sbjct:    1 MTEVKLFNRWSFEDVEVNDMSLHDYIAVKQKYAVYLPHTAGRYAVKRFRKAQCPIVERLVNSLMMHGRNNGKKLMAVRIVKQAFEIIHLLTDANPVQVFVQAVMNAGPREDSTRIGSAGTVRRQAVDVSPLRRVNVALYLITTGAREASFRSMKTISECLADEIINASKGSSNSYAIKKKDEVERVAKANR 191          
BLAST of Ggra9065.t1 vs. uniprot
Match: A0A1X6P5K0 (Ribosomal_S7 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5K0_PORUM)

HSP 1 Score: 321 bits (822), Expect = 6.460e-110
Identity = 161/188 (85.64%), Postives = 176/188 (93.62%), Query Frame = 0
Query:    7 VKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            V LFNRW FE+V V+DI L DYIAV Q+ AV+LPHTAGRYNAKRFRK+QCPIVERLVCSLMM GRNNGKK+MA RIVKH FEIIHLLTD+NP+QVLV+AV+N+GPREDSTRIGSAGTVRRQAVDVSPMRR+N+AL LL TGARE+AFRSIKTIAECLADELINA+KGSSNSYAIKKKDEVERVAKANR
Sbjct:    6 VALFNRWDFENVDVKDIALIDYIAVKQKYAVFLPHTAGRYNAKRFRKSQCPIVERLVCSLMMKGRNNGKKLMATRIVKHTFEIIHLLTDENPVQVLVDAVINAGPREDSTRIGSAGTVRRQAVDVSPMRRVNMALCLLTTGARESAFRSIKTIAECLADELINASKGSSNSYAIKKKDEVERVAKANR 193          
BLAST of Ggra9065.t1 vs. uniprot
Match: A0A7J7IKQ8 (Ribosomal protein S5 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IKQ8_9RHOD)

HSP 1 Score: 319 bits (817), Expect = 4.290e-109
Identity = 156/189 (82.54%), Postives = 176/189 (93.12%), Query Frame = 0
Query:    6 EVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            E+KLFN+WS EDV V DI L DYIAV Q+ AVYLPHTAGRY  +RF+KAQCPIVERLV +LM HGRNNGKK+MA+RIVKH FEIIH+LTDQNP+QVLV+AV+NSGPREDSTRIGSAGTVRRQAVDVSP+RR+NVAL+LL TGARE+AFR++KTIAECLADELINAAKGSSNS+AIKKKDE+ERVAKANR
Sbjct:    9 EIKLFNKWSLEDVEVSDIALADYIAVKQKYAVYLPHTAGRYQTRRFKKAQCPIVERLVNALMKHGRNNGKKLMAIRIVKHSFEIIHVLTDQNPVQVLVDAVINSGPREDSTRIGSAGTVRRQAVDVSPLRRVNVALWLLTTGARESAFRNVKTIAECLADELINAAKGSSNSFAIKKKDEIERVAKANR 197          
BLAST of Ggra9065.t1 vs. uniprot
Match: A0A250WR81 (Ribosomal_S7 domain-containing protein n=6 Tax=Eukaryota TaxID=2759 RepID=A0A250WR81_9CHLO)

HSP 1 Score: 318 bits (816), Expect = 5.490e-109
Identity = 156/194 (80.41%), Postives = 174/194 (89.69%), Query Frame = 0
Query:    1 MAVVSEVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            MA   ++KLF +WSFEDV+V DI L DYIAV    AVY PHTAGRY  KRFRKAQCPIVERLV SLMMHGRNNGKK++AVRIVKH FEIIHLLTDQNPIQV V+A++NSGPRED+TRIGSAG VRRQAVD+SP+RR+N A+YLL TGAREAAFR+IKT+AECLADEL+NAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct:    1 MAAQPDIKLFGKWSFEDVQVNDISLEDYIAVKANFAVYAPHTAGRYQKKRFRKAQCPIVERLVASLMMHGRNNGKKLLAVRIVKHAFEIIHLLTDQNPIQVTVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTVAECLADELVNAAKGSSNSYAIKKKDELERVAKANR 194          
BLAST of Ggra9065.t1 vs. uniprot
Match: G3MHT8 (Ribosomal_S7 domain-containing protein (Fragment) n=1 Tax=Amblyomma maculatum TaxID=34609 RepID=G3MHT8_AMBMU)

HSP 1 Score: 319 bits (817), Expect = 8.310e-109
Identity = 158/190 (83.16%), Postives = 175/190 (92.11%), Query Frame = 0
Query:    5 SEVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            S+VKLFNRWSFEDV V DI L+DYI V  + A YLPHTAGRY+AKRFRKAQCPIVERL  SLMMHGRNNGKK+MAVRIVKH  E+IHLLTDQNPIQV+V+AV+NSGPRED+TRIGSAG VRRQAVD+SP+RR+N ALYLL TGARE++FR+IKTIAECLADELINAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct:   27 SDVKLFNRWSFEDVSVTDISLSDYIGVAGKHATYLPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMELIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGARESSFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 216          
BLAST of Ggra9065.t1 vs. uniprot
Match: A0A7S2ZL40 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZL40_9RHOD)

HSP 1 Score: 318 bits (814), Expect = 1.030e-108
Identity = 163/192 (84.90%), Postives = 174/192 (90.62%), Query Frame = 0
Query:    4 VSEVKLFNRWSFEDVRVEDICLNDYIAVNQR-SAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            ++EV LFNRWSF+DV V D  L  YIAV Q  + V++PHT+GRY  KRFRKA CPIVERLVCSLMMHGRNNGKK+MA RIVKH FEIIHLLTD+NPIQVLV AVVNSGPREDSTRIGSAGTVRRQAVDVSP+RR+NVALYLL TGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR
Sbjct:    1 MTEVMLFNRWSFDDVEVGDFGLAQYIAVKQYGNKVFIPHTSGRYQKKRFRKASCPIVERLVCSLMMHGRNNGKKLMATRIVKHTFEIIHLLTDENPIQVLVNAVVNSGPREDSTRIGSAGTVRRQAVDVSPLRRVNVALYLLTTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 192          
BLAST of Ggra9065.t1 vs. uniprot
Match: A0A090M8V6 (Ribosomal protein S5/S7, eukaryotic/archaeal n=5 Tax=Ostreococcus TaxID=70447 RepID=A0A090M8V6_OSTTA)

HSP 1 Score: 318 bits (814), Expect = 1.110e-108
Identity = 155/194 (79.90%), Postives = 177/194 (91.24%), Query Frame = 0
Query:    1 MAVVSEVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKRFRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQVLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGAREAAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR 194
            MA V EVKLF +W+F+DV + DI L DYIAV  + AVY+PHTAGR+ AKRFRKAQCPIVERLV SLMMHGRNNGKK+MAVRIVKH  EIIHLLTDQNP+QV+V+A++NSGPRED+TRIGSAG VRRQAVD+SP+RR+N A+YLL TGAREAAFR++KTI+ECLADELINAAKGSSNSYAIKKKDE+ERVAKANR
Sbjct:    1 MATVQEVKLFGKWTFDDVEINDISLEDYIAVKPKYAVYVPHTAGRFAAKRFRKAQCPIVERLVNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPVQVIVDAIINSGPREDATRIGSAGVVRRQAVDLSPLRRVNQAIYLLTTGAREAAFRNVKTISECLADELINAAKGSSNSYAIKKKDELERVAKANR 194          
The following BLAST results are available for this feature:
BLAST of Ggra9065.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRW22.060e-12996.9140S ribosomal protein S5 n=2 Tax=Rhodymeniophycida... [more]
R7Q4U97.280e-12895.36Ribosomal_S7 domain-containing protein n=1 Tax=Cho... [more]
A0A5J4Z3W92.440e-11284.5440S ribosomal protein S5 n=1 Tax=Porphyridium purp... [more]
M2VXU32.100e-11083.7740S ribosomal protein S5e n=1 Tax=Galdieria sulphu... [more]
A0A1X6P5K06.460e-11085.64Ribosomal_S7 domain-containing protein n=1 Tax=Por... [more]
A0A7J7IKQ84.290e-10982.54Ribosomal protein S5 n=2 Tax=Cyanidiaceae TaxID=26... [more]
A0A250WR815.490e-10980.41Ribosomal_S7 domain-containing protein n=6 Tax=Euk... [more]
G3MHT88.310e-10983.16Ribosomal_S7 domain-containing protein (Fragment) ... [more]
A0A7S2ZL401.030e-10884.90Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A090M8V61.110e-10879.90Ribosomal protein S5/S7, eukaryotic/archaeal n=5 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 1..194
e-value: 7.3E-94
score: 314.9
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 8..194
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMTIGR01028TIGR01028coord: 6..194
e-value: 4.0E-91
score: 301.7
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealCDDcd14867uS7_Eukaryotecoord: 8..194
e-value: 1.11488E-135
score: 374.968
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 2..194
e-value: 2.7E-41
score: 138.4
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 5..194
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 51..194
e-value: 4.8E-38
score: 130.1
NoneNo IPR availablePANTHERPTHR11205:SF3640S RIBOSOMAL PROTEIN S5coord: 5..194
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 60..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:76396..76980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9065.t1Ggra9065.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 76396..76980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9065.t1 ID=Ggra9065.t1|Name=Ggra9065.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=195bp
MAVVSEVKLFNRWSFEDVRVEDICLNDYIAVNQRSAVYLPHTAGRYNAKR
FRKAQCPIVERLVCSLMMHGRNNGKKIMAVRIVKHCFEIIHLLTDQNPIQ
VLVEAVVNSGPREDSTRIGSAGTVRRQAVDVSPMRRINVALYLLCTGARE
AAFRSIKTIAECLADELINAAKGSSNSYAIKKKDEVERVAKANR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036823Ribosomal_S7_dom_sf
IPR005716Ribosomal_S5/S7_euk/arc
IPR000235Ribosomal_S5/S7
IPR023798Ribosomal_S7_dom
IPR020606Ribosomal_S7_CS