Ggra9110.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9110.t1
Unique NameGgra9110.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length268
Homology
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A2V3IH64 (Single-strand selective monofunctional uracil DNA glycosylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH64_9FLOR)

HSP 1 Score: 386 bits (991), Expect = 1.060e-133
Identity = 173/230 (75.22%), Postives = 202/230 (87.83%), Query Frame = 0
Query:   29 MSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEMLQVL 258
            MSD+LS LSF+ PVTHVYNPLEYAWDAH+WYVR++  SKKKVLLVGMNPGPWGMAQTGVPFGEVTAVR+FL+MP D+ I+RP+ ENAKRPV+G +CTRSEVSGKRLWREWAQ+EYGD  TFF TFFVHNYCPLMFMESGGRNRTPVQL+A ER +++  CD ALRKV + L+V+AVCG+G FAE+RCK AL+G  + VHC+LHPSPASP ANRGW  QAKKQI E+++ +
Sbjct:    1 MSDDLSTLSFSSPVTHVYNPLEYAWDAHKWYVRQYATSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVRDFLRMPLDMKIDRPKPENAKRPVTGLACTRSEVSGKRLWREWAQVEYGDTATFFNTFFVHNYCPLMFMESGGRNRTPVQLRAAERNSLLGICDDALRKVVKALDVRAVCGVGAFAEQRCKTALQGENVVVHCLLHPSPASPIANRGWVQQAKKQIEELMEKI 230          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A8J7C7P3 (Single-stranded DNA-binding protein n=2 Tax=unclassified Candidatus Sulfomarinibacter TaxID=2886016 RepID=A0A8J7C7P3_9BACT)

HSP 1 Score: 275 bits (703), Expect = 6.140e-90
Identity = 132/233 (56.65%), Postives = 170/233 (72.96%), Query Frame = 0
Query:   22 ILEAEKDMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEM 254
            ++E  +++++E+ +L FA PVTHVYNPL+YAWDAH  Y+ ++G++ KKVL +GMNPGPWGMAQTGVPFGEV AVR++L++  D +I RP  E+ KRPV G +CTRSEVSG RLW  WA+  +     FFE FF+ NYCPL FMES GRNRTP +L   ERK + EACD ALRK  E L    V G+G FAE R   AL   G+ +  +LHPSPASPAANRGW+ +A +++ E+
Sbjct:    3 LVEIAQELAEEVDRLEFAPPVTHVYNPLDYAWDAHTRYLERYGDAPKKVLFLGMNPGPWGMAQTGVPFGEVGAVRDWLRI--DAAIGRPDPEHPKRPVHGLACTRSEVSGARLWG-WARDLFATPERFFERFFIANYCPLAFMESTGRNRTPDKLPVSERKPLFEACDRALRKTVEYLRSDLVVGVGTFAEGRAWSALGEAGVRIGRILHPSPASPAANRGWSERATRELREL 232          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A2D7H2U5 (Single-stranded DNA-binding protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D7H2U5_9BACT)

HSP 1 Score: 269 bits (687), Expect = 2.080e-87
Identity = 127/241 (52.70%), Postives = 167/241 (69.29%), Query Frame = 0
Query:   18 IASRILEAEKDMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEMLQVL 258
            ++ R++   +++S  +  LSF++PV  VYNPL+YAW +H  +++K+G  K +VLL+GMNPGPWGMAQTGVPFGEV  V  FL +   +   +P+L + KRP+ GF C RSEVSG+R+W EWA+  YG A  FFE FF+ NYCPL FME GG+NRTP +LK  ER  + + CD+ALRK  + LE   + GIGGFA+KR    LE     +  +LHPSPASP ANRGWAPQ +KQ   M  +L
Sbjct:    1 MSKRLITITRELSKGVDTLSFSEPVAFVYNPLKYAWKSHRSFLQKYGGGKGRVLLIGMNPGPWGMAQTGVPFGEVANVHAFLGIEEPVK--QPELVHPKRPIQGFDCPRSEVSGRRVW-EWARKRYGSAERFFENFFILNYCPLCFMEEGGKNRTPDKLKPEERDAVFQVCDVALRKFVKALEPSKIVGIGGFAKKRAMKTLERDD--IETILHPSPASPIANRGWAPQIEKQFEAMGVLL 236          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A7Z9P3G3 (Single-stranded DNA-binding protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9P3G3_9BACT)

HSP 1 Score: 268 bits (686), Expect = 2.580e-87
Identity = 127/241 (52.70%), Postives = 167/241 (69.29%), Query Frame = 0
Query:   18 IASRILEAEKDMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEMLQVL 258
            ++ R++   K++S     L+F++PV  VYNPL+YAW +H+ Y+ K+G+   +VLL+GMNPGPWGMAQTGVPFGEV AVR+FL +     + +P   + KRPV GF C RSEVSG+R+W EWA+  YGDA +FF  FFV NYCPL FME GG+NRTP +L   ER  + + CD+ALRK  + LE   + GIGGFA+KR    L+     +  +LHPSPASP ANRGWAPQ ++Q   M  +L
Sbjct:    1 MSKRLISLTKELSKGCDALTFSEPVAFVYNPLDYAWKSHKSYLEKYGDGTGRVLLIGMNPGPWGMAQTGVPFGEVNAVRDFLGIEE--KVKQPAQVHPKRPVQGFDCQRSEVSGRRVW-EWAKERYGDADSFFSEFFVLNYCPLCFMEEGGKNRTPDKLNPEERDAVFDVCDVALRKFVDALEPSKIVGIGGFAKKRAMKTLDRDD--IETILHPSPASPMANRGWAPQIEQQFQSMGVLL 236          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A7Z9IJ06 (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9IJ06_9BACT)

HSP 1 Score: 266 bits (681), Expect = 1.870e-86
Identity = 126/237 (53.16%), Postives = 167/237 (70.46%), Query Frame = 0
Query:   18 IASRILEAEKDMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEM 254
            ++ R+++  +++S  +  LSF+ PV  VYNPLEYAW++H+ Y+ K+G+ K ++LL+GMNPGPWGMAQTGVPFGEV AVR+FL + N +  N+P  E+ KRPV GF C RSEVSG+R+W EWA+  +     FF  F++ NYCPL FME GG+NRTP +LK  ER  + E CD+ALRK  +VL    + G+GGFA+KR    L      +  +LHPSPASP ANRGWAPQ +KQ   M
Sbjct:    1 MSKRLIKITRELSKGVDALSFSAPVHAVYNPLEYAWESHKSYLEKYGDGKGRILLLGMNPGPWGMAQTGVPFGEVNAVRDFLGICNPV--NKPIQEHPKRPVQGFDCPRSEVSGRRVW-EWAKDRFETPEQFFSRFYIINYCPLCFMEEGGKNRTPDKLKPEERDAVFEVCDVALRKFVDVLAPSKIIGVGGFAKKRAMKTLGRED--IETILHPSPASPMANRGWAPQIEKQFEAM 232          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A2E5UFJ2 (Single-stranded DNA-binding protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E5UFJ2_9BACT)

HSP 1 Score: 266 bits (679), Expect = 2.980e-86
Identity = 124/234 (52.99%), Postives = 170/234 (72.65%), Query Frame = 0
Query:   21 RILEAEKDMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEM 254
            +++E  K ++  +++LSFA PVT VYNPL+YAW  HE +++K+G+ + +VLL+GMNPGPWGMAQTG+PFGEV  VR+FL +   +   +P +E+ KRP+ GF CTRSEVSG+R+W EWA+  YG    FF+ +F+ NYCPL FME GGRNRTP +L + ERK + E CD+ALR   +VL+   + GIG FA+K+    L  +   V  +LHPSPASP ANRGWAPQ + Q+++M
Sbjct:    4 KLIEITKQLAANVNQLSFADPVTCVYNPLDYAWKPHEAFLKKYGDGEGRVLLIGMNPGPWGMAQTGIPFGEVAGVRDFLGIEKPVQ--KPSIEHPKRPILGFDCTRSEVSGRRVW-EWARERYGTPEHFFKQYFLLNYCPLCFMEEGGRNRTPDKLPSDERKNVFEVCDVALRSFVDVLKPSKIVGIGLFAKKQAMKCLNRSD--VGTILHPSPASPIANRGWAPQIEAQLTKM 232          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A7Z1TTA0 (Single-stranded DNA-binding protein n=1 Tax=Holophagae bacterium TaxID=2073116 RepID=A0A7Z1TTA0_9BACT)

HSP 1 Score: 265 bits (677), Expect = 5.410e-86
Identity = 125/231 (54.11%), Postives = 166/231 (71.86%), Query Frame = 0
Query:   28 DMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEMLQVL 258
            ++ + +  L+F+ PV HVYNPL+YAW AH  Y+ +FG   K+++L+GMNPGPWGMAQTGVPFGEV AVR++L +    ++ RPQ E+  RPV+GF+CTRSEVSG+R+W  WA   +G A  FF  FF+ NYCPL+F+ES GRN TP +L A ER+ +  ACD+AL +  E+LE   V G+G FA +    AL GTG+ V  VLHPSPASPAANRGW+ Q   +++E+  VL
Sbjct:    9 ELREAVRPLAFSPPVRHVYNPLDYAWPAHRAYLERFGTRPKEIMLLGMNPGPWGMAQTGVPFGEVAAVRDWLGI--SAAVGRPQREHPARPVAGFACTRSEVSGRRVWG-WASERFGTAERFFARFFIANYCPLLFLESSGRNLTPDRLPASERQPLEAACDVALARSVELLEPLMVVGVGAFAARSAARALAGTGVRVEQVLHPSPASPAANRGWSEQLTSRLTELGVVL 236          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A2D5AWE6 (Single-stranded DNA-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AWE6_9BACT)

HSP 1 Score: 263 bits (671), Expect = 4.550e-85
Identity = 128/237 (54.01%), Postives = 168/237 (70.89%), Query Frame = 0
Query:   22 ILEAEKDMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEMLQVL 258
            I+   + +S  + +LSF  PVTHVYNPL YA   HE +++++       LL+GMNPGP+GMAQTGVPFGEVTAVRE+LK+     + +P++E+ +RP+ GF CTRSEVSG+R W  WA+  +G    FF+ FFV NYCPL+F+E GGRNRTP +LKA ER+ +   CD AL++V   +E Q V GIG FA+ R + AL G  L +  +LHPSPASPAANRGWAPQ +KQ+S M  +L
Sbjct:    6 IVAISRKLSRNVDRLSFGSPVTHVYNPLRYARTTHETFLKRYAQRGVGALLLGMNPGPFGMAQTGVPFGEVTAVREWLKIEG--RVGKPRIEHERRPIDGFQCTRSEVSGRRFW-SWARERFGTPKRFFKHFFVWNYCPLVFLEEGGRNRTPDKLKAHEREALFALCDEALQQVCNTIEPQRVIGIGRFAQARARSAL-GEDLDIATILHPSPASPAANRGWAPQVEKQLSAMGVLL 238          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A522YHM5 (Single-stranded DNA-binding protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A522YHM5_9BACT)

HSP 1 Score: 262 bits (670), Expect = 6.240e-85
Identity = 125/232 (53.88%), Postives = 166/232 (71.55%), Query Frame = 0
Query:   23 LEAEKDMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEM 254
            LEA + ++     L F  P  +VYNPLEYAW+AH  YV ++G   ++VLL+GMNPGP+GMAQTGVPFGEV+ VR++L +     + +P  E+ KRP+ GF+C RSEVSG RLW  WA+  +     FF+TFFV NYCPL+FM+ GGRN TP +L A ER  +  ACD ALR++    + + V G+G FAE R ++ALEGTG++  C+LHPSPASPAANRGWAPQA++Q+  +
Sbjct:    5 LEAARALARAAGALRFRPPTAYVYNPLEYAWEAHRAYVERWGAGPREVLLLGMNPGPFGMAQTGVPFGEVSLVRDWLGV--SAPVGKPPREHPKRPIEGFACRRSEVSGARLWG-WARERFKTPERFFKTFFVLNYCPLVFMDEGGRNLTPDKLPAGERAPLEAACDAALRRLTAFYKPRLVVGVGQFAEARARLALEGTGVSFGCILHPSPASPAANRGWAPQAERQLEAL 233          
BLAST of Ggra9110.t1 vs. uniprot
Match: A0A8J6Y912 (Single-stranded DNA-binding protein n=1 Tax=Candidatus Sulfomarinibacter kjeldsenii TaxID=2885994 RepID=A0A8J6Y912_9BACT)

HSP 1 Score: 260 bits (664), Expect = 5.790e-84
Identity = 125/235 (53.19%), Postives = 166/235 (70.64%), Query Frame = 0
Query:   20 SRILEAEKDMSDELSKLSFAKPVTHVYNPLEYAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLKMPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFFETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLEVQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQISEM 254
            S ++E  + +++E+ +L F  PV+HVYNPL+YAW AH  Y+  +G++ K+VL +GMNPGPWGMAQTGVPFGEV+AVR++L +  +I   RP+ E+ KR + G +CTRSEVSG RLW  WA+  +G    FF  FFV NYCPL F+E GGRNRTP +L A ER  ++E CD AL    E L  + V G+G FAE R + ALE   + +  +LHPSPASPAANRGWA QA +++ E+
Sbjct:    5 SLLVEIARRLAEEVDRLRFTAPVSHVYNPLDYAWQAHSQYLDLYGDAPKEVLFLGMNPGPWGMAQTGVPFGEVSAVRDWLGISAEI--RRPEHEHPKRQIMGLACTRSEVSGARLWG-WAREVFGTPSRFFSRFFVANYCPLAFLEEGGRNRTPDKLPAGERGPLLEICDRALIHTVEFLRPEIVVGVGAFAEGRAQAALEDVDVAIGRILHPSPASPAANRGWAEQATRELREL 236          
The following BLAST results are available for this feature:
BLAST of Ggra9110.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH641.060e-13375.22Single-strand selective monofunctional uracil DNA ... [more]
A0A8J7C7P36.140e-9056.65Single-stranded DNA-binding protein n=2 Tax=unclas... [more]
A0A2D7H2U52.080e-8752.70Single-stranded DNA-binding protein n=1 Tax=Phycis... [more]
A0A7Z9P3G32.580e-8752.70Single-stranded DNA-binding protein n=1 Tax=Phycis... [more]
A0A7Z9IJ061.870e-8653.16Single-strand selective monofunctional uracil-DNA ... [more]
A0A2E5UFJ22.980e-8652.99Single-stranded DNA-binding protein n=1 Tax=Phycis... [more]
A0A7Z1TTA05.410e-8654.11Single-stranded DNA-binding protein n=1 Tax=Holoph... [more]
A0A2D5AWE64.550e-8554.01Single-stranded DNA-binding protein n=1 Tax=Planct... [more]
A0A522YHM56.240e-8553.88Single-stranded DNA-binding protein n=1 Tax=bacter... [more]
A0A8J6Y9125.790e-8453.19Single-stranded DNA-binding protein n=1 Tax=Candid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 16..260
e-value: 1.3E-94
score: 318.2
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 18..252
IPR039134Single-strand selective monofunctional uracil DNA glycosylasePANTHERPTHR13235SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASEcoord: 10..254
IPR039134Single-strand selective monofunctional uracil DNA glycosylaseCDDcd19374UDG-F3_SMUG1-likecoord: 20..253
e-value: 2.52059E-141
score: 394.555

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:227520..228402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9110.t1Ggra9110.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 227520..228402 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9110.t1 ID=Ggra9110.t1|Name=Ggra9110.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=268bp
MAMPEKPRSAKRKRGADIASRILEAEKDMSDELSKLSFAKPVTHVYNPLE
YAWDAHEWYVRKFGNSKKKVLLVGMNPGPWGMAQTGVPFGEVTAVREFLK
MPNDISINRPQLENAKRPVSGFSCTRSEVSGKRLWREWAQIEYGDAPTFF
ETFFVHNYCPLMFMESGGRNRTPVQLKAVERKTIMEACDIALRKVAEVLE
VQAVCGIGGFAEKRCKIALEGTGLTVHCVLHPSPASPAANRGWAPQAKKQ
ISEMLQVLESGTSQREN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf
IPR039134SMUG1