Ggra9090.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9090.t1
Unique NameGgra9090.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length582
Homology
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A2V3IS08 (Transmembrane E3 ubiquitin-protein ligase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS08_9FLOR)

HSP 1 Score: 893 bits (2307), Expect = 0.000e+0
Identity = 441/545 (80.92%), Postives = 480/545 (88.07%), Query Frame = 0
Query:   38 HSFPRNLRRLYDGSWESTQLFPNASFHNRAGFALLTAENHRTAFSQATNLVRAELLVRDGAYRTQRDLSLNMLGLYDQPSGTVVLVGDVLFDEVPAVLHRLYRVYISTPHVLPLNVSEARFVAALSPSFQKQRKQYRAQRALPRASVAAQCPFQATFSVTEGQFTDNTPSD-DSHPFDPDGPGVLSGRQLDPNDEYVEMKGVFVSEQCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYRPIVLDDETEDLEAAAGECRPLVAGAPAEPLRECCICMEPVPVNSRERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPPP 581
            H FPR+L R+YDG+W++   FPNA+FH   GFALLTA+NH T  S A NLV  +LL+RDGAY T RDL+LN+LGLYDQ SGTV++VGDV   +   +LHRLY VY     V  LN +E RF+ A+SP FQK RKQYRAQRA+PR+ +AAQC F ATF VTEGQFTD TPS+ D+   DP+ PGVLSG QLDP DE+VEMKGVFVS+QC T+ISLVLSTLDT TLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELS LYSRFYGSLL+GI+LLYQLQNH+RFFLFAL+SFWVPQI+LNAVEDHRRPLLPSYIIG+TVTRLAIPLYFWGCPHNFLH+QP+P SAIALVVWL TQA ILLSQYKFGPRWFIPKELLPEKYDY+RPIV+DD++ DLEA A E   L A A  EPLRECCICMEPVPVNSRERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPPP
Sbjct:   32 HVFPRDLARIYDGTWDANSPFPNATFHKSTGFALLTAQNHLTTLSPAVNLVLGDLLLRDGAYGTPRDLTLNLLGLYDQLSGTVIVVGDVFSSDALDILHRLYTVYSRNQKVTKLNTTEERFLKAVSPRFQKHRKQYRAQRAIPRSLIAAQCAFHATFHVTEGQFTDETPSESDTQRLDPNVPGVLSGSQLDPTDEFVEMKGVFVSKQCQTRISLVLSTLDTVTLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSTLYSRFYGSLLIGILLLYQLQNHMRFFLFALFSFWVPQIVLNAVEDHRRPLLPSYIIGTTVTRLAIPLYFWGCPHNFLHVQPQPASAIALVVWLSTQATILLSQYKFGPRWFIPKELLPEKYDYFRPIVVDDDSADLEAGASEDEMLAADADPEPLRECCICMEPVPVNSRERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPPP 576          
BLAST of Ggra9090.t1 vs. uniprot
Match: R7Q198 (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q198_CHOCR)

HSP 1 Score: 672 bits (1733), Expect = 4.250e-236
Identity = 350/573 (61.08%), Postives = 418/573 (72.95%), Query Frame = 0
Query:   68 GFALLTAENHRTAFSQATNLVRAELLVRDGAYRTQRDLSLNMLGLYDQPSGTVVLVGDVLFDEVPAVLHRLYRVYIST-----PHVLPL-NVSEARFVAALSPSFQKQRKQYRAQR--ALPRASVAAQCPFQATFSVTEGQFTDNTPSDDSHPFDPDGPGVLSGRQLDPN----------------------------------------DEYVEMKGVFVSEQCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYRPIVLDDE--TEDLEAAAG---------ECRPLVAGAPAEPLRECCICMEPVPVNSRERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPPP 581
            G+ALLTA+N+++  S   N+V  ELL+RDG YR+ R++SL+++G+Y+  +G +VL+GDVLF++V + + +LY  +         H L   N+++  F+ AL+P F + RKQ+   R  A     VA+QCPF A+F++  G ++D+ P ++ +     GPG  S  Q  P+                                        DE V M G F S+ C TK+++ LSTLDT+ LFGKAINYTLLVTVVAF QVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQ LFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLL+GI LLYQ+QNH+R F+FALY+FWVPQIILN VEDHRRPLLP YII ++VTRLAIPLYFWGCP NFLHIQP+P S +ALV WL  Q IILLSQYKFGPRWFIPK  LPEKYDYYRP+ + DE   +D+EA  G         + RPLV G   EP RECCICME V V++R+RMVTPC+HFFH+ CLE+WLE+RLECALCRT VPPP
Sbjct:    2 GYALLTAKNYKSDLSPRVNVVFGELLLRDGPYRSPREVSLHLIGVYEWATGVLVLIGDVLFEDVQSAVQKLYTAFNDAHTHGPAHSLTAQNITQEAFIQALAPRFTEHRKQFAGSRPNAQRHKGVASQCPFIASFAIARGSYSDSLPQENEYTSLSTGPGAASPGQGVPDPSGASILESARGDVGADIAPGFLSNGVGPPAGAEEHVSEQDEMVRMHGTFESDACKTKMTIELSTLDTDKLFGKAINYTLLVTVVAFAQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQSLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLLGIFLLYQMQNHIRLFVFALYAFWVPQIILNVVEDHRRPLLPIYIIATSVTRLAIPLYFWGCPQNFLHIQPQPSSVMALVAWLAIQVIILLSQYKFGPRWFIPKAFLPEKYDYYRPLPMGDEGLEDDIEAQEGTREEDEEGSDKRPLVGGMSNEPKRECCICMESVGVHARDRMVTPCNHFFHAICLERWLEVRLECALCRTAVPPP 574          
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A2V3IDZ3 (Transmembrane E3 ubiquitin-protein ligase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDZ3_9FLOR)

HSP 1 Score: 488 bits (1256), Expect = 6.520e-168
Identity = 242/278 (87.05%), Postives = 258/278 (92.81%), Query Frame = 0
Query:  220 VLSGRQLDPNDEYVEMKGVFVSEQCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYD 497
            VLSG QLD  DE+VEMKGVFVS+QC T++SLVL TLDT TLFGKAINYTLLVTVVAFIQVIVLIRQME+TSTQAGARRVSLMTV LQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSI LMRWMLLIWKARRPSGFSEGWEAMRRELS LYSRF+GSL +GI+L YQLQNH+RFFLFA +SFWV QI+LNAVE+HRRPLLPSYIIG+TVT LAIPLYFWGCPH FL++QP+P SAI LVVWL TQA ILLSQYKFGP WFIPKELLPEKYD
Sbjct:   30 VLSGSQLDRTDEFVEMKGVFVSKQCQTRVSLVLFTLDTVTLFGKAINYTLLVTVVAFIQVIVLIRQMEITSTQAGARRVSLMTVNLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSICLMRWMLLIWKARRPSGFSEGWEAMRRELSTLYSRFHGSLFIGILLFYQLQNHMRFFLFASFSFWVSQIVLNAVENHRRPLLPSYIIGTTVTHLAIPLYFWGCPHKFLYVQPQPASAITLVVWLSTQATILLSQYKFGPHWFIPKELLPEKYD 307          
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A7S2ZGL4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZGL4_9RHOD)

HSP 1 Score: 498 bits (1282), Expect = 8.110e-167
Identity = 281/577 (48.70%), Postives = 364/577 (63.08%), Query Frame = 0
Query:   39 SFPRNLRRLYDGSWEST--QLFP------------NASFHNRAGFALLTAENH-RTAFSQATNLVRAELLVRDGAYRTQRDLSLNMLGLYDQPSGTVVLVGDVLFDEVPAVLHRLYRVYISTPHVLPLNVSEARFVAALSPSFQKQRKQYRAQRA-LPRASVAAQCPFQATFSVTEGQFTDNTPSDDSHPFDPDGPGVLSGRQLDPNDEYVEMKGVFVSEQCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQ---PLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYR----PIVLDDETEDLEAAAGEC-----------RPLVAGAPAEPLRECCICMEPVPVNSRERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPPP 581
            ++P NL+R YDGSW       FP            +  F N  GFA L AENH R       + V  E+++RDGAYRT RD+ + ++G+Y    G ++LVGD L+++    LHRLY +   +       +SE  F  AL+   ++QR  Y  + + L    V ++C F+A F V  G F+  +PS          P  L+  + + N EY++M G   S++C T   + L+T D ETLF KAINYTLLVT VAF QV+VLIRQMEMTST AGA RVSL++VGLQ V+DSYL L HL MG+  Q    LFNAFA AAFFKFI FSIF MR+ML+IWKARRPSGFS GW+AMRRELS+LYSRFYGSLL G+I+LY+LQ ++R F+FALYSFWVPQI L+  EDHRRPL P YI+G + TRLAIPLYF  CP NFLH++P+  +   L+ W+  QA ILL Q+++G R  IPK  LPEKYDYYR    P    +   D+EA   +            + +  G     L +C ICM  V +N   RM TPC+H FH +CL++W++ ++EC  CR P+PPP
Sbjct:   84 TYPLNLKRDYDGSWSVAVNDTFPFGDAPDPEFAKQDLLFENTDGFASLNAENHPREKLGSDMHYVDGEIILRDGAYRTFRDVLIKVIGVYKVHEGVIMLVGDFLYED--NALHRLYELV--SEQKGSWKLSEEAFTNALAADVERQRDHYLGRGSKLGSHPVQSKCDFEAVFYVAPGHFSGTSPS----------PRELASHEGN-NSEYIKMNGNITSKECGTSAEIQLATFDRETLFVKAINYTLLVTFVAFTQVLVLIRQMEMTSTPAGANRVSLLSVGLQTVSDSYLFLAHLVMGMFAQRFSTLFNAFAIAAFFKFIIFSIFEMRYMLMIWKARRPSGFSGGWDAMRRELSILYSRFYGSLLFGLIILYRLQKYMRVFVFALYSFWVPQIFLSIFEDHRRPLHPLYIVGMSATRLAIPLYFLCCPRNFLHVRPQYTTGNWLMAWVAFQASILLLQHRYGARCLIPKRFLPEKYDYYRMLTEPAARVERLGDVEAGNLDAIVPVSDTHLRGKKVSIGYAGPRLVDCVICMANVNLNGPNRMATPCEHVFHEECLQQWMDEKMECPTCRRPLPPP 645          
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A1X6PAD1 (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAD1_PORUM)

HSP 1 Score: 446 bits (1147), Expect = 1.220e-149
Identity = 235/423 (55.56%), Postives = 280/423 (66.19%), Query Frame = 0
Query:  235 MKGVFVSEQCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYRPIVL------------------------------------DDET-----------EDLEAAAGECRPLVAGA-----------------------------PAEPLRECCICMEPVPVNSRERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPPP 581
            M GV  S  C TK+ +VLSTLDTETLF KAINYTLLVT V+F+QV+ L+ QME T+TQA A RVSL+ VG+Q+VADSYLCLGHLTMGIAV  LFNAFATAAFFKFI FS+F MR++LLIW+A+RP+GF+ GWE+MRRELSMLY+RFYGSLL+GI+LLYQ++NH++ FLFALYSFW PQIIL+A  D+RRPL P YI+G + TRLAIPLYF+ CP NFLHIQPRP  A ALV W+ TQA +L SQ+ +GPRWF+PK  LPEKYDYYRP+ L                                    DD +           ED EA A      +A A                             PA    +C ICM  V VN R+R+VTPCDHFFH  CL  W+E+R EC +CR P+PPP
Sbjct:    1 MVGVLESAACGTKLEVVLSTLDTETLFSKAINYTLLVTAVSFLQVLCLLPQMESTATQAAAARVSLLVVGMQSVADSYLCLGHLTMGIAVNTLFNAFATAAFFKFIIFSVFQMRYLLLIWRAKRPAGFTHGWESMRRELSMLYTRFYGSLLLGILLLYQMKNHVQLFLFALYSFWTPQIILSATNDYRRPLHPLYILGMSTTRLAIPLYFYACPVNFLHIQPRPAVAAALVAWMATQAGVLASQHVWGPRWFVPKRFLPEKYDYYRPVTLPPTGGVPGXXXXXXXXXXXXXXXXXXXXXXXXXGVGDDASRTPSLSGGDGGEDAEAGAPLLSVAIAPAXXXXXXXXXXXXXXXXXXXXXXXXSGPPLPASGEIDCVICMVGVAVNGRDRVVTPCDHFFHEGCLLTWMEVRGECPICRRPLPPP 423          
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A5J4Z8G2 (Transmembrane E3 ubiquitin-protein ligase 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8G2_PORPP)

HSP 1 Score: 450 bits (1157), Expect = 3.760e-143
Identity = 262/640 (40.94%), Postives = 348/640 (54.37%), Query Frame = 0
Query:   45 RRLYDGSWESTQLFPNASFHNRAGFALLTAENHRTAFSQATNLVRAELLVRDGAYRTQRDLSLNMLGLYDQPSGTVVLVGDVLFDEVPAVLHRLYRVYIST--------PHVLPLNVSEARFVAALSPSFQKQRKQYRAQRA------LPRASVAAQCPFQATFSVTEGQF-------------------------------TDNTPSD------------------------------------DSHPF----DPDGPGVLSGRQL---------------DPNDEYVEMKGVFVSEQCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYRPIVLDD---ETEDLEAAAGECRPLVAGAPAEPLRECCICMEPVPVNSRERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPPP 581
            R LY    E  +      F +  GFAL T +    A +   ++   ELL+RDG YR+ RD S++++GLY+   G + +VGD+L D    + +RLY  ++S           +   N+S+A F   L       R+Q+R  R       +  A +A+ C FQA  +V   Q+                               TD    D                                    DS  F      D    LSG ++                 ND +V M G   SE C   + L ++TLD ++LF  AINYT++VT +  +Q+++L++QME  S  A A RVS++++GLQA+ADSYLCL HLT+GI VQ LFNAFATAAFFKF  FSIF MR+ML+IW+ARR + FSEGWEAMRRELS+LY+RFYGSLL+G++LLY +QNHL FFLF  YSFWVPQI++NA EDHRRPL P YI G TVTR  IP YF  C  NFLH+QP  G A+    W+  QA +L SQ+ +G RWFIPK  LPEKYDYYRP+   +   E  D+E   G    +V         +C ICM PV +N+R  M  PC H FH DCL++W++ ++EC +CR  +P P
Sbjct:  433 RSLYRDPAEEARRAQELQFTSYDGFALFTVDVREYALTSEVHVFLGELLLRDGIYRSTRDASIHVVGLYEWKLGLLTMVGDLLHDSDHEIWNRLYSTFVSDRVLGRVREQALAKRNMSKALFGRTLQYVMDDYRRQFRIARRKLADVRVEYADLASLCRFQAHLAVEPAQYDKMGSMFSSLVRATQRPNYRFSRGVDLTQPSTDRAERDNFAPPAQKSADQASSPGSGSTTLKEFRKRRGSNSQLDSPAFFLRSGSDDTDALSGIRIRRQTSSSAALSRLERPANDSFVAMSGRITSENCHINVELKVTTLDADSLFQMAINYTIMVTSLTLLQMLILMQQMETASMPATASRVSMVSLGLQALADSYLCLCHLTLGITVQSLFNAFATAAFFKFTLFSIFEMRYMLIIWRARRLAAFSEGWEAMRRELSLLYTRFYGSLLMGVVLLYYMQNHLHFFLFLFYSFWVPQIVINATEDHRRPLHPQYIFGMTVTRSIIPCYFLACRSNFLHLQPHVGLAVRFFAWMMLQACMLYSQHVWGSRWFIPKRFLPEKYDYYRPVSRAEHGAEVTDVECGGGAAFEVV---------DCVICMVPVNLNARSCMTAPCHHIFHEDCLQQWMDRKMECPVCRRALPVP 1063          
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A7I4C873 (RING-type domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4C873_PHYPA)

HSP 1 Score: 375 bits (962), Expect = 1.940e-120
Identity = 224/554 (40.43%), Postives = 327/554 (59.03%), Query Frame = 0
Query:   46 RLYDGSWESTQLFPNASFHNRAGFALLTAENHRTAFSQATNL--------VRAELLVRDGAYRTQRDLSLNMLGLYDQPSGTVVLVGDVLFDEVPAVLHRLYRVYISTP-HVLPLNVSEARFVAALSPSFQKQRKQYRAQRALPRA-SVAAQCPFQATFSVTEGQFTDNTPSDDSHPFDPDGPGVLSGRQLDPNDEYVEMKGVFVSE-------QCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYRPIVLDDETEDLEAAAGECRPLVAGAPAEPLRECCICMEPVPVNSR--ERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPP 580
            R + G+W       N +F ++  F +    +    F   ++L        V+ E+++RDG Y +  DL + M G+Y  P   + +V   L   V + ++R      S+P H+L +  S+   VA  +P     R  +R++R   R   +   C  Q    V+              P  PD     +  + +   ++ EM+G+           +C + + +  ++++ E  + KA+NYTL+VT ++F+QV+ LIRQME ++TQ+GA +VSLM +G QA+ D+YLCL HLT GI V+ LFN FATAAFFKF+ FSIF MR++L IWK+RRP    EGWE MRRELS+LYSRFYG LL GI+++Y+L + LR+ LF  YSFW+PQI+ N V D R+PL P YI+G T+TRLAIPLY + CP+NF+ I+P  G  + L  +L  QA ILL Q+  G R FIP++LLPEKY Y+R ++  +E  +      EC P+          +C ICM  V V+ R  + MVTPCDHFFH+ CL++W++I++EC  CR P+PP
Sbjct:   11 RAFAGTWSHR----NGNFSSK--FPVFQKSSGNIVFELTSSLTDIRGVHYVQGEVVLRDGVYISDGDLQMKMEGVYVWPFRQLRMV---LSSAVDSEMNRGEVFIRSSPYHLLGMFSSQ---VAQDTP-----RNYHRSKRKTSRIMEMGKMCKIQLVTQVS--------------PRVPDYKREFAKGEHER--QFCEMRGLVEGPSMHEDQGECFSPLVVNATSVNVELYYNKAVNYTLMVTFISFLQVLFLIRQMEHSNTQSGAAKVSLMMIGQQAIMDAYLCLLHLTAGILVESLFNTFATAAFFKFVVFSIFEMRYLLAIWKSRRPVSSGEGWETMRRELSVLYSRFYGFLLSGILIIYELHSMLRYILFLFYSFWIPQIVANVVRDSRKPLHPHYIVGITLTRLAIPLYAFACPNNFMRIEPNLGWCLGLTTFLGAQAAILLLQHFCGARCFIPRQLLPEKYSYFRRVIRANEHIE---RGEECTPI----------DCVICMAAVDVSQRCNDCMVTPCDHFFHTGCLQRWMDIKMECPTCRRPLPP 518          
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A059A0B0 (RING-type domain-containing protein n=2 Tax=rosids TaxID=71275 RepID=A0A059A0B0_EUCGR)

HSP 1 Score: 370 bits (949), Expect = 2.960e-120
Identity = 187/367 (50.95%), Postives = 247/367 (67.30%), Query Frame = 0
Query:  222 SGRQLDPNDEYVEMKGVFVSEQ------CDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYRPIVLDDETEDLEAAAGECRPLVAGAPAEPLRECCICMEPVPVNSRER--MVTPCDHFFHSDCLEKWLEIRLECALCRTPVPP 580
            S +Q D   ++ +M+G+  S        C   + L  ++++ E  + KA+NYTL+VT V+F+QV++LIRQME ++TQ+GA +VS++ +G QA+ D+YLCL HLT GI V+ LFNAFATAAFFKF+ FSIF MR++L IWKA RP    EGWE MRRELS+LYSRFYG LL GI+L+Y+  N++R  L  +YSFWVPQII N + D R+PL P YI+G TVTRLAIPLY +GCP+NF+ I+P     I L V+L  QA ILL Q+ FG RWFIP+++LPEKY YYR    D                          +C ICM  + +  R    MVTPCDHFFHS CL++W++I++EC  CR P+PP
Sbjct:   46 SSKQDDGEHDHYQMEGLMESPSVDDDGDCFAPLLLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSIIMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPMNNGEGWEIMRRELSVLYSRFYGILLGGILLMYEFHNYIRPILLLIYSFWVPQIITNVLRDSRKPLHPHYILGMTVTRLAIPLYIFGCPYNFMRIEPDKSWCICLGVFLGLQASILLLQHYFGSRWFIPRQILPEKYSYYRRFDQDSSHST---------------------DCVICMTSIDLTQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPP 391          
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A2R6WGM4 (RING-type domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WGM4_MARPO)

HSP 1 Score: 378 bits (970), Expect = 2.970e-120
Identity = 223/541 (41.22%), Postives = 320/541 (59.15%), Query Frame = 0
Query:   43 NLRRLYDGSWESTQLFPNAS-FHNRAGFALLTAENHRTAFSQATNLVRAELLVRDGAYRTQRDLSLNMLGLYDQPSGTVVLVGDVLFDEVPAVLHRLYRVYISTPHVLPLNVSEARFVAALSPSFQKQRKQYRAQRALPRASVAAQCPFQATFSVTEGQFTDNTPSDDSHPFDPDGPGVLSGRQLDPNDEYVEMKGVFVSEQCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYRPIVLDDETEDLEAAAGECRPLVAGAPAEPLRECCICMEPVPVNSR--ERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVPP 580
            N+   Y G+W    +    S F    G  +    +  T   +  + V+ E++++DG YR+  DL + M G+Y  P   + +V     D    V   L +   S  H+L +  S+      L  S + + +  R  R+   A +   C  Q    ++    +D    +  H    +  G++ G  +D + E            C + +++  ++++ E  + KA+NYTL+VT ++F+QV+ LIRQME ++TQ+GA +VSL+ +G QA+ D+YLCL HLT GI V+ LFNAFATAAFFKF+ FSIF MR++L IWKARRP    EGWEAMRRELS+LYSRFYG LL GI+++Y+L + LR+ L   YSFW+PQI+ N V D R+PL P YI+G TVTRLAIPLY +GCP+NF+ ++      I L+ ++F+QA +LL Q+  G R FIP++ LPEKY YYR +    +   L A  GE   LV         +C ICM  V +  R  E MVTPCDHFFHS CL++W++I++EC  CR P+PP
Sbjct:  122 NISGTYKGTWLVRNITARFSDFRMTTGNIIFELTSSPTDL-RGVHYVQGEVVLQDGTYRSDGDLQMKMEGVYVWPFRQLRMVLSNALDSDLKVADDLSQA--SPYHLLGMFSSQV-----LQDSSRDRVR--RNGRSSSMAEMGKHCKIQMVTQIS-AVVSDYKSGEREHQVC-EMQGLMEGPMIDDDGE------------CFSPLTVNATSVNVEVYYNKAVNYTLMVTFISFLQVLFLIRQMEHSNTQSGAAKVSLLMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVIFSIFEMRYLLAIWKARRPVNSGEGWEAMRRELSVLYSRFYGFLLGGILIMYELHSMLRYILILFYSFWIPQIVANVVRDSRKPLHPHYILGMTVTRLAIPLYTFGCPNNFMRVETSFSWCIGLIAFMFSQAAVLLLQHYMGARCFIPRQCLPEKYCYYRRV----DRSSL-APGGEDEILVV--------DCVICMAAVDMAGRSTECMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPP 625          
BLAST of Ggra9090.t1 vs. uniprot
Match: A0A7S3UCQ8 (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UCQ8_9CHLO)

HSP 1 Score: 372 bits (955), Expect = 4.780e-119
Identity = 221/553 (39.96%), Postives = 306/553 (55.33%), Query Frame = 0
Query:   37 PHSFPRNLRRLYDGSWE------STQLFPNASFHNRAGFALLTAENHRTAFSQATNLVRAELLVRDGAYRTQRDLSLNMLGLYDQPSGTVVLVGD--VLFDEVPAVLHRLYRVYISTPHVLPLNVSEARFVAALSPSFQKQRKQYRAQRALPRASVAAQCPFQATFSV-TEGQFTDNTPSDDSHPFDPDGPGVLSGRQLDPNDEYVEMKGVFVSEQCDTKISLVLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSLMTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWMLLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRFFLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHNFLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYRPIVLDDETEDLEAAAGECRPLVAGAPAEPLRECCICMEPVPV-NSRERMVTPCDHFFHSDCLEKWLEIRLECALCRTPVP 579
            PH +PRN    Y G+WE      S    P      R    L  A +     S+    VR EL +R   Y   +D +L + G+Y  P G ++   +  +L D     + +    Y        L ++  R+  A S +  + R    +  +    S+  +C F       T  + ++  P + S  +                      KG  VS+ C   + +  + +  E    KAINYTL+V+++ FIQV ++IRQME T+TQA A +VS++T+ LQA+ D+Y+CL HLT G+ V  LFNAFAT AFFKF+ FSIF MR+ML IWKARRP+ F E W + RREL++LYSRFY  +L GI+LLY+ Q  L       YSFW+PQI+ NA++D R+PL+P YI+G ++TRL IP YF GCP NFLH+         L  W+  Q  +LL+Q+ +GPRWF+P+  LPEKYD+YR + LD   E              G  ++   +C ICM PV V N R RMVTPCDHFFH +CLE+W+EI+LEC  CRTP+P
Sbjct:   37 PHVWPRNATGTYRGNWEREEYNRSITTLPLLDLE-RGSAVLRIAVDPGERNSKDVVFVRGELQLRQNLYFADKDENLRLRGVYIAPHGRLIAFSESKMLTDMSTEDMSKKGDEYRQA-----LRLTAKRY--ANSGAAGRTRLAMNSMDSFNPLSLKKRCSFHVDLRFKTAEEKSERQPIEGSRTY----------------------KGRLVSDNCHFSLRVNGTQVLVEKYHSKAINYTLVVSIINFIQVALIIRQMERTNTQASAAKVSILTIALQAILDAYICLSHLTGGLVVDTLFNAFATVAFFKFVMFSIFEMRFMLTIWKARRPASF-ETWNSTRRELNILYSRFYLCMLAGILLLYEWQKFLPVLSIGFYSFWMPQIVENAMQDIRKPLMPQYILGMSITRLFIPCYFLGCPQNFLHLDQHLQVCFILAGWVGLQTTMLLTQHYYGPRWFVPRRFLPEKYDFYRQVDLDMTVE-------------TGGSSDI--DCVICMTPVDVKNRRSRMVTPCDHFFHPECLERWMEIKLECPYCRTPLP 543          
The following BLAST results are available for this feature:
BLAST of Ggra9090.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IS080.000e+080.92Transmembrane E3 ubiquitin-protein ligase 1 n=1 Ta... [more]
R7Q1984.250e-23661.08RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A2V3IDZ36.520e-16887.05Transmembrane E3 ubiquitin-protein ligase 1 n=1 Ta... [more]
A0A7S2ZGL48.110e-16748.70Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6PAD11.220e-14955.56RING-type domain-containing protein n=1 Tax=Porphy... [more]
A0A5J4Z8G23.760e-14340.94Transmembrane E3 ubiquitin-protein ligase 1 n=1 Ta... [more]
A0A7I4C8731.940e-12040.43RING-type domain-containing protein n=2 Tax=Physco... [more]
A0A059A0B02.960e-12050.95RING-type domain-containing protein n=2 Tax=rosids... [more]
A0A2R6WGM42.970e-12041.22RING-type domain-containing protein n=2 Tax=Marcha... [more]
A0A7S3UCQ84.780e-11939.96Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 532..575
e-value: 0.0025
score: 12.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 533..574
e-value: 3.6E-5
score: 33.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 532..575
e-value: 1.7E-9
score: 37.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 533..575
score: 11.235273
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 521..579
e-value: 2.4E-12
score: 47.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..221
NoneNo IPR availablePANTHERPTHR22763:SF165DSC E3 UBIQUITIN LIGASE COMPLEX SUBUNIT 1coord: 211..580
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 211..580
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 425..446
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 400..418
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 419..424
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 477..581
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 395..399
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..283
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 303..324
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..302
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 375..394
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 355..374
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 325..329
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 330..354
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 447..457
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 458..476
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availableCDDcd16448RING-H2coord: 533..575
e-value: 5.24683E-12
score: 58.6175
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 532..580
NoneNo IPR availableTMHMMTMhelixcoord: 264..283
NoneNo IPR availableTMHMMTMhelixcoord: 425..447
NoneNo IPR availableTMHMMTMhelixcoord: 457..479
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 400..418
NoneNo IPR availableTMHMMTMhelixcoord: 373..395
NoneNo IPR availableTMHMMTMhelixcoord: 330..352
NoneNo IPR availableTMHMMTMhelixcoord: 303..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:166125..167870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9090.t1Ggra9090.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 166125..167870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9090.t1 ID=Ggra9090.t1|Name=Ggra9090.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=582bp
MRSQRATTPCIRQLWLPLLLAAAALHAAAAASSAAAPHSFPRNLRRLYDG
SWESTQLFPNASFHNRAGFALLTAENHRTAFSQATNLVRAELLVRDGAYR
TQRDLSLNMLGLYDQPSGTVVLVGDVLFDEVPAVLHRLYRVYISTPHVLP
LNVSEARFVAALSPSFQKQRKQYRAQRALPRASVAAQCPFQATFSVTEGQ
FTDNTPSDDSHPFDPDGPGVLSGRQLDPNDEYVEMKGVFVSEQCDTKISL
VLSTLDTETLFGKAINYTLLVTVVAFIQVIVLIRQMEMTSTQAGARRVSL
MTVGLQAVADSYLCLGHLTMGIAVQPLFNAFATAAFFKFICFSIFLMRWM
LLIWKARRPSGFSEGWEAMRRELSMLYSRFYGSLLVGIILLYQLQNHLRF
FLFALYSFWVPQIILNAVEDHRRPLLPSYIIGSTVTRLAIPLYFWGCPHN
FLHIQPRPGSAIALVVWLFTQAIILLSQYKFGPRWFIPKELLPEKYDYYR
PIVLDDETEDLEAAAGECRPLVAGAPAEPLRECCICMEPVPVNSRERMVT
PCDHFFHSDCLEKWLEIRLECALCRTPVPPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD