Ggra9061.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9061.t1
Unique NameGgra9061.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length314
Homology
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BLAST of Ggra9061.t1 vs. uniprot
Match: A0A2V3IRZ4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ4_9FLOR)

HSP 1 Score: 394 bits (1011), Expect = 1.890e-121
Identity = 188/299 (62.88%), Postives = 238/299 (79.60%), Query Frame = 0 
Query:   15 LVSIVFFTACDCYTEVFSIAKDVEGTSYYVGNIDSNFFVAKRGADCSFVWTSSAGSATGDDDNDQNREIFYDVLIGSDGLIYAVGTTKGNFSSPEDEVPTLDAAVVVYDPADGTLVRQAQFDLDNGLDDVARAIVQKSDGTLLVAVYGSPPNAQNTAVHATKFLEISPESLELVDRHNVQVQTTGTFASITGGPTILDIIYVESQEAVVAVGQILGRGMLFMFSLSTGAVVSQTEWGSIIGNMQIGGLATDHNGTFFVTGSSSENVLQNGDLQSVTTSEFHAYVLRYDNLLLAAPELTW 313
            LV +  F  CD YTEVFSIAK+ + ++YYVGN DSNFF+AKR + CS  WTS+ GSATGDDDND+NREIFYDV+IGSDGL+YA GTTKGNFS P +EVPTLDAA+VVY+  DG+LVRQAQ+D+++GLD+VARAI +K+DG LLVAVYGS PN QNTA+  T+ +E+S ++LE+++  +V+V T+ +  SIT GP I D +YVES   + AVGQILGRGMLF + L++G V+SQ+EWG+ +GNMQ+GGL  D NG F+VTGSSS NVL N DL+  T SE+H YV+R+DNLL   P  TW
Sbjct:   22 LVLVALFATCDSYTEVFSIAKESDDSTYYVGNRDSNFFIAKRNSQCSPQWTSTEGSATGDDDNDENREIFYDVIIGSDGLLYAAGTTKGNFSFPANEVPTLDAAIVVYNNTDGSLVRQAQYDIESGLDNVARAIAEKADGNLLVAVYGSTPNVQNTAIFETRIIEVSHDTLEVMNISSVEVTTSDSIFSITAGPRIWDFVYVESLGVIAAVGQILGRGMLFTYDLTSGTVISQSEWGNTLGNMQVGGLVVDDNGVFYVTGSSSSNVLSNVDLEQATNSEYHTYVIRFDNLLSGQPVPTW 320
The following BLAST results are available for this feature:
BLAST of Ggra9061.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRZ41.890e-12162.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 21..308
e-value: 3.2E-6
score: 28.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..313
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..24
score: 5.0
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 40..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:66405..67425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9061.t1Ggra9061.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 66405..67425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9061.t1 ID=Ggra9061.t1|Name=Ggra9061.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=314bp
MWSPRVGAKSLWMVLVSIVFFTACDCYTEVFSIAKDVEGTSYYVGNIDSN
FFVAKRGADCSFVWTSSAGSATGDDDNDQNREIFYDVLIGSDGLIYAVGT
TKGNFSSPEDEVPTLDAAVVVYDPADGTLVRQAQFDLDNGLDDVARAIVQ
KSDGTLLVAVYGSPPNAQNTAVHATKFLEISPESLELVDRHNVQVQTTGT
FASITGGPTILDIIYVESQEAVVAVGQILGRGMLFMFSLSTGAVVSQTEW
GSIIGNMQIGGLATDHNGTFFVTGSSSENVLQNGDLQSVTTSEFHAYVLR
YDNLLLAAPELTW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam