Ggra9076.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9076.t1
Unique NameGgra9076.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
BLAST of Ggra9076.t1 vs. uniprot
Match: R7QGG9 (40S ribosomal protein S8 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGG9_CHOCR)

HSP 1 Score: 353 bits (907), Expect = 1.580e-122
Identity = 177/204 (86.76%), Postives = 191/204 (93.63%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAGENEGEAISAKKAEKQTKRAADRLDLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKKAGK 204
            MGISRDSRHKRRLTGGKHPYFRKKRK+ELGRQP++TKLGTKLVRPVRVRGGNLKMR LRLETGNF+WGSEG + KSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFR+YY  +YGIDIGKKKAGE  GE ISAK+AEKQ KRA  RL+LD+GV +LFQSGRLLA+LSSRPGQCGRADGY+LEGKELEFY+R MQKKKKAGK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYFRKKRKFELGRQPSMTKLGTKLVRPVRVRGGNLKMRALRLETGNFSWGSEGFSGKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRQYYHRHYGIDIGKKKAGEGAGEVISAKRAEKQKKRAEGRLELDQGVADLFQSGRLLASLSSRPGQCGRADGYLLEGKELEFYTRMMQKKKKAGK 204          
BLAST of Ggra9076.t1 vs. uniprot
Match: A0A2V3IRX7 (40S ribosomal protein S8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX7_9FLOR)

HSP 1 Score: 350 bits (897), Expect = 5.280e-121
Identity = 175/204 (85.78%), Postives = 188/204 (92.16%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAGENEGEAISAKKAEKQTKRAADRLDLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKKAGK 204
            MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPA TKLG+KLVRPVRVRGGN+KMR LRLETGNFAWGSEGIAHK+RILNVVYNASNNELVRTNTLVKGC+VQIDATPFR+YY N+YGID+GKKKAG+NEG+ I           AADRL LDEGV+ELFQSGRLLA+LSSRPGQCGRADGYVLEGKELEFYS++MQKKKKAGK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAHTKLGSKLVRPVRVRGGNIKMRALRLETGNFAWGSEGIAHKTRILNVVYNASNNELVRTNTLVKGCVVQIDATPFRQYYHNFYGIDMGKKKAGDNEGDKIXXXXXXXXXXXAADRLPLDEGVRELFQSGRLLASLSSRPGQCGRADGYVLEGKELEFYSKAMQKKKKAGK 204          
BLAST of Ggra9076.t1 vs. uniprot
Match: RS8 (40S ribosomal protein S8 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=RS8_GRIJA)

HSP 1 Score: 317 bits (811), Expect = 6.690e-108
Identity = 161/204 (78.92%), Postives = 178/204 (87.25%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAGENEGEAISAKKAEKQTKRAADRLDLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKKAGK 204
            MGISRDSRHKRRLTGGKHPY  KKRKYELGRQPA+TK+G KLVR VRVRGGNLK R LRLE+GNFAWGSE    KSRILNVVYNASNNELVRTNT VKGCI+QIDATPFR+YY N+YGIDIGKKKAG+ E +  S + A KQ KR   RL LDEG+KELFQSGRL A+++SRPGQ GRADGY+LEGKELEFY+++MQKKKKAGK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGGKLVRTVRVRGGNLKSRALRLESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGKKKAGDEESK-FSKRHAGKQEKRCQTRLPLDEGIKELFQSGRLYASIASRPGQSGRADGYLLEGKELEFYAKAMQKKKKAGK 203          
BLAST of Ggra9076.t1 vs. uniprot
Match: 40S ribosomal protein S8-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5824 (40S ribosomal protein S8-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5824)

HSP 1 Score: 284 bits (727), Expect = 4.410e-95
Identity = 149/201 (74.13%), Postives = 168/201 (83.58%), Query Frame = 0
Query:    3 ISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAGENEGEAISAKKAEKQTKRAA--DRLDLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKK 201
            ISRDS HKRRLTGG  P   KKRK+ LGRQPA+TKLGTKLVR VRVRGG++K R LRLETG++AWGSE  A K+RILNVVYNASNNELVRTNTLVKG IVQIDATPFR+Y+   YG DIGK+K G+ E EA+S + AEK+ KRA   DR+ LD GV ELFQSGRLLA ++SRPGQCGR DGY+LEGKELEFYS+ MQKKKK
Sbjct:    1 ISRDSLHKRRLTGGTKPKTHKKRKFNLGRQPAMTKLGTKLVREVRVRGGSVKNRALRLETGSYAWGSEAHAAKTRILNVVYNASNNELVRTNTLVKGAIVQIDATPFRQYFLRMYGEDIGKRKTGDAEAEAVSNRVAEKRAKRAEANDRVKLDPGVAELFQSGRLLARIASRPGQCGRCDGYILEGKELEFYSKMMQKKKK 201          
BLAST of Ggra9076.t1 vs. uniprot
Match: A0A5J4YIL6 (40S ribosomal protein S8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIL6_PORPP)

HSP 1 Score: 273 bits (697), Expect = 1.570e-90
Identity = 140/207 (67.63%), Postives = 167/207 (80.68%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAGENEGEAISAKKAEKQTKRAADRLD---LDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKKAGK 204
            MGISRDS+HKRRLTGGK  Y+RKKRK+ L RQPA+TKLGTKLVRPVRVRGGN+K+RGLRLETGNF+W SE ++HK+R+L VVYNASNNELVRTNTLVKG IVQIDATPF+ +Y N+YG ++GKKK  E  GE    KK++   K+ A R +   +D  + E F SGRL A +SSRPGQ GR DGY+LEGKELEFY + + KKKK+GK
Sbjct:    1 MGISRDSKHKRRLTGGKQAYYRKKRKFCLARQPAMTKLGTKLVRPVRVRGGNIKLRGLRLETGNFSWPSEAVSHKTRVLGVVYNASNNELVRTNTLVKGAIVQIDATPFKTWYLNHYGQELGKKKTPEEVGEV--EKKSDAVLKKIAARAEGHVMDRTLAEEFMSGRLYACVSSRPGQSGRCDGYILEGKELEFYKKQLMKKKKSGK 205          
BLAST of Ggra9076.t1 vs. uniprot
Match: A0A7S1EQ05 (40S ribosomal protein S8 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ05_9RHOD)

HSP 1 Score: 270 bits (691), Expect = 1.330e-89
Identity = 138/207 (66.67%), Postives = 165/207 (79.71%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAGENEGEAISAKKAEKQTKRAADRLD---LDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKKAGK 204
            MGISRDS+HKRRLTGGK P FRKKRK+ELGRQ ++TKLGTKLVRPVRVRGGN+K+R LRLE GNF+WGSE I  K+RIL VVYNASNNELVRTNTLVKGC+VQIDA PF+ ++  +YG+++GKKK G         KK++   K+ A R +   +D  +++ F SGRL A +SSRPGQ GR DGYVLEGKELEFY R +QKKKK+GK
Sbjct:    1 MGISRDSKHKRRLTGGKQPLFRKKRKFELGRQASMTKLGTKLVRPVRVRGGNVKLRALRLENGNFSWGSEAITRKTRILGVVYNASNNELVRTNTLVKGCVVQIDAAPFKAWHLQHYGVEVGKKK-GPGSDATEEVKKSKSVLKKLAARAEGHSVDRALEDEFVSGRLFAVVSSRPGQSGRCDGYVLEGKELEFYKRQLQKKKKSGK 206          
BLAST of Ggra9076.t1 vs. uniprot
Match: A0A1X6P2M7 (40S ribosomal protein S8 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2M7_PORUM)

HSP 1 Score: 264 bits (675), Expect = 3.600e-87
Identity = 137/206 (66.50%), Postives = 158/206 (76.70%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAGENE--GEAISAKKAEKQTKRAADRLDLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKKAGK 204
            MGISRDS+HKRRLTGGK P++RKKRK+ELGRQPA+TKLG ++VRPVRVRGGNLK R LRLE GNFAW SE  A K+R+L VVYNASNNELVRTNTLVKG I+QIDATPFR++Y  +YG++IGKKKA E E                             +LFQSGRLLA +SSRPGQ GR DGY+LEGKELEFY +++QKKKKAGK
Sbjct:    1 MGISRDSKHKRRLTGGKQPFYRKKRKFELGRQPAMTKLGPQIVRPVRVRGGNLKQRALRLENGNFAWASEATARKTRVLTVVYNASNNELVRTNTLVKGAIIQIDATPFRQWYLQHYGVEIGKKKASEVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLFQSGRLLARISSRPGQSGRCDGYLLEGKELEFYQKALQKKKKAGK 206          
BLAST of Ggra9076.t1 vs. uniprot
Match: A0A1Y1I5M7 (40S ribosomal protein S8 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I5M7_KLENI)

HSP 1 Score: 262 bits (669), Expect = 3.860e-86
Identity = 138/211 (65.40%), Postives = 165/211 (78.20%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGT-KLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAG----ENEGEAISAKKA---EKQTKRAADRLDLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKKAG 203
            MGISRDS HKRRLTGGK   +RKKRKYELGRQPA+TKL + K VRPVRVRGG+LK R LRL+TGNF+WGSE +A K+R+L+VVYNASNNELVRT TLVK  IVQ+DATPFR++Y  +YG +IGKKK      E E E ++ KK+   E++  + A+   LD  + E F  GRLLAA+SSRPGQCGR DGY+LEG+ELEFYSR +QKKK  G
Sbjct:    1 MGISRDSTHKRRLTGGKKKSWRKKRKYELGRQPAMTKLSSHKTVRPVRVRGGHLKFRALRLDTGNFSWGSEAVARKTRVLDVVYNASNNELVRTQTLVKNAIVQVDATPFRQWYAQHYGAEIGKKKGKTVKKEGEEEEVAEKKSAHVERKLAKRAEGQKLDPNLDEQFAGGRLLAAISSRPGQCGRCDGYILEGRELEFYSRKLQKKKSKG 211          
BLAST of Ggra9076.t1 vs. uniprot
Match: A0A7S3A8B0 (40S ribosomal protein S8 n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8B0_9RHOD)

HSP 1 Score: 258 bits (659), Expect = 9.450e-85
Identity = 131/206 (63.59%), Postives = 160/206 (77.67%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKK--AGENEGEAISAKKAEKQTKRAADRLDLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKKKAGK 204
            MGISRD  HKRRLTGGK PY+RKKRK+ +GRQP LTKLG+K+VRPVRVRGGN+K R LRLETGNF+WGSE IA K+R++ V YNASNNELVRTNTLVKG IV IDA PF+ +Y  +YGI++GKKK   GE EG   SA   +K   R + R  L+  +++ F +GRLLA ++SRPGQCGR DGY+LEG+EL+FY + +  KKK  K
Sbjct:    1 MGISRDKTHKRRLTGGKRPYYRKKRKFCMGRQPTLTKLGSKIVRPVRVRGGNIKQRALRLETGNFSWGSEAIARKTRLIAVTYNASNNELVRTNTLVKGAIVYIDANPFKAWYNQHYGIELGKKKHKEGEEEGTKRSASVLKKIEARESSR-SLERQIEDQFMTGRLLARIASRPGQCGRCDGYILEGRELDFYVKQLSHKKKKTK 205          
BLAST of Ggra9076.t1 vs. uniprot
Match: A0A6G0XHQ6 (40S ribosomal protein S8 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHQ6_9STRA)

HSP 1 Score: 253 bits (647), Expect = 6.310e-83
Identity = 132/202 (65.35%), Postives = 155/202 (76.73%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRGGNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRRYYRNYYGIDIGKKKAGENEGEAISAKKAEKQTKRAADRL--DLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKK 200
            MGISRDSRHKRR TGGK  +FRKKRK+E+GRQPA TKLG K V PVRVRGGN+K R LRL+TGNF+WG+E ++HK+R+L V YNASNNELVRTNTLVK  IVQIDATPFR++Y  +YG+ IG KK  E+  E  +   +  Q K AA +   DLD  ++E F SGRL A +SSRPGQ GR DGY+LEGKELEFY R M  KK
Sbjct:    1 MGISRDSRHKRRETGGKRKFFRKKRKFEMGRQPANTKLGAKRVNPVRVRGGNMKFRALRLDTGNFSWGTEAVSHKTRVLIVTYNASNNELVRTNTLVKNAIVQIDATPFRQWYEAHYGVKIGVKKNQEDAKEEAAKGSSHVQRKFAARQRTRDLDTRLEEQFTSGRLYACISSRPGQSGRCDGYILEGKELEFYQRKMATKK 202          
The following BLAST results are available for this feature:
BLAST of Ggra9076.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QGG91.580e-12286.7640S ribosomal protein S8 n=1 Tax=Chondrus crispus ... [more]
A0A2V3IRX75.280e-12185.7840S ribosomal protein S8 n=1 Tax=Gracilariopsis ch... [more]
RS86.690e-10878.9240S ribosomal protein S8 n=1 Tax=Griffithsia japon... [more]
40S ribosomal protein S8-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D58244.410e-9574.1340S ribosomal protein S8-like n=1 Tax=Mercenaria m... [more]
A0A5J4YIL61.570e-9067.6340S ribosomal protein S8 n=1 Tax=Porphyridium purp... [more]
A0A7S1EQ051.330e-8966.6740S ribosomal protein S8 n=1 Tax=Timspurckia oligo... [more]
A0A1X6P2M73.600e-8766.5040S ribosomal protein S8 n=1 Tax=Porphyra umbilica... [more]
A0A1Y1I5M73.860e-8665.4040S ribosomal protein S8 n=1 Tax=Klebsormidium nit... [more]
A0A7S3A8B09.450e-8563.5940S ribosomal protein S8 n=4 Tax=Rhodosorus marinu... [more]
A0A6G0XHQ66.310e-8365.3540S ribosomal protein S8 n=1 Tax=Aphanomyces eutei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001047Ribosomal protein S8eTIGRFAMTIGR00307TIGR00307coord: 1..186
e-value: 1.4E-47
score: 159.0
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..201
IPR042563Ribosomal protein S8e subdomain, eukaryotesGENE3D1.10.168.20Ribosomal protein S8e, subdomaincoord: 108..163
e-value: 1.2E-11
score: 47.0
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 5..184
e-value: 2.8E-53
score: 179.7
NoneNo IPR availableGENE3D3.10.290.70coord: 26..201
e-value: 1.6E-50
score: 172.3
NoneNo IPR availablePANTHERPTHR10394:SF340S RIBOSOMAL PROTEIN S8coord: 1..201
NoneNo IPR availableCDDcd11380Ribosomal_S8e_likecoord: 5..184
e-value: 9.07537E-58
score: 176.556
IPR018283Ribosomal protein S8e, conserved sitePROSITEPS01193RIBOSOMAL_S8Ecoord: 11..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:122009..122733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9076.t1Ggra9076.t1Gracilaria gracilis GNS1m malemRNAtig00000176_pilon 122009..122733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9076.t1 ID=Ggra9076.t1|Name=Ggra9076.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPALTKLGTKLVRPVRVRG
GNLKMRGLRLETGNFAWGSEGIAHKSRILNVVYNASNNELVRTNTLVKGC
IVQIDATPFRRYYRNYYGIDIGKKKAGENEGEAISAKKAEKQTKRAADRL
DLDEGVKELFQSGRLLAALSSRPGQCGRADGYVLEGKELEFYSRSMQKKK
KAGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001047Ribosomal_S8e
IPR042563Ribosomal_protein_S8e_euk
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR018283Ribosomal_S8e_CS