Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9858.t1.start1 | Ggra9858.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000170_pilon 145103..145105 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9858.t1.intron1 | Ggra9858.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000170_pilon 145367..145777 + |
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9858.t1.stop1 | Ggra9858.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000170_pilon 146345..146347 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9858.t1 ID=Ggra9858.t1|Name=Ggra9858.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=278bp
MDGATTDAFADWGLMPICPIMPEADVAPIDADLDWSQYPSLSDAMHVSLD
GELANPLETVARRTPELNLPHSPSHLAPATPIDQHHSPVVMSPPPRDERG
VALTPASSSSGLGVVKTIVKTEPSMKRAVSKPRTPLAKATLSLKAKRERE
AALFPKEMLVDLEGTTSAQVRKMNQNQRELVLFKRKLRNRESARRSRQKR
QAVMGELQTEVDELRKIAMGTADAALNLNRENRELRRLLHQREQRIVMLE
EENDRLKRRVTKEDLHSSVSIERKLGA* back to topspliced messenger RNA >Ggra9858.t1 ID=Ggra9858.t1|Name=Ggra9858.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=834bp|location=Sequence derived from alignment at tig00000170_pilon:145103..146347+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACGGTGCTACCACCGACGCGTTCGCCGATTGGGGGCTCATGCCCAT
TTGCCCCATCATGCCCGAGGCCGATGTCGCTCCCATCGATGCCGACCTCG
ACTGGTCGCAGTACCCTTCCCTCTCCGATGCTATGCACGTCAGTCTGGAC
GGCGAATTGGCAAACCCTCTGGAAACCGTCGCCCGACGAACCCCAGAGCT
CAACTTGCCACATTCCCCGTCGCACCTCGCGCCCGCCACCCCCATCGACC
AACATCACTCCCCCgttgtaatgtcgccgccgcctCGCGACGAGAGGGGC
GTTGCCTTGACGCCCGCCAGTTCTTCGTCGGGCTTGGGCGTGGTTAAAAC
CATCGTCAAGACCGAGCCTTCTATGAAGCGCGCTGTGTCCAAGCCGCGAA
CCCCGCTTGCGAAGGCAACCCTATCGCTCAAGGCGAAGAGGGAACGGGAG
GCTGCCTTGTTCCCAAAGGAGATGCTTGTCGATTTGGAGGGGACCACGTC
TGCTCAGGTCAGGAAGATGAACCAGAACCAGAGGGAGTTGGTTCTCTTCA
AGAGAAAGCTGCGAAACAGAGAGTCTGCAAGACGGTCGAGGCAGAAGAGG
CAGGCCGTCATGGGTGAGCTCCAGACTGAGGTCGACGAGCTTCGCAAGAT
TGCCATGGGCACGGCTGACGCTGCCCTTAACTTGAATCGGGAGAACCGGG
AACTCAGGAGACTCTTGCATCAGCGTGAACAACGCATCGTGATGCTTGAG
GAAGAGAACGATCGGTTGAAGAGACGTGTGACAAAAGAAGACCTACATTC
GTCAGTTTCCATTGAACGCAAGCTTGGTGCGTGA back to topprotein sequence of Ggra9858.t1 >Ggra9858.t1 ID=Ggra9858.t1|Name=Ggra9858.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=278bp
MDGATTDAFADWGLMPICPIMPEADVAPIDADLDWSQYPSLSDAMHVSLD
GELANPLETVARRTPELNLPHSPSHLAPATPIDQHHSPVVMSPPPRDERG
VALTPASSSSGLGVVKTIVKTEPSMKRAVSKPRTPLAKATLSLKAKRERE
AALFPKEMLVDLEGTTSAQVRKMNQNQRELVLFKRKLRNRESARRSRQKR
QAVMGELQTEVDELRKIAMGTADAALNLNRENRELRRLLHQREQRIVMLE
EENDRLKRRVTKEDLHSSVSIERKLGA* back to topmRNA from alignment at tig00000170_pilon:145103..146347+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9858.t1 ID=Ggra9858.t1|Name=Ggra9858.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1245bp|location=Sequence derived from alignment at tig00000170_pilon:145103..146347+ (Gracilaria gracilis GNS1m male)
ATGGACGGTGCTACCACCGACGCGTTCGCCGATTGGGGGCTCATGCCCAT
TTGCCCCATCATGCCCGAGGCCGATGTCGCTCCCATCGATGCCGACCTCG
ACTGGTCGCAGTACCCTTCCCTCTCCGATGCTATGCACGTCAGTCTGGAC
GGCGAATTGGCAAACCCTCTGGAAACCGTCGCCCGACGAACCCCAGAGCT
CAACTTGCCACATTCCCCGTCGCACCTCGCGCCCGCCACCCCCATCGACC
AACATCACTCCCCCGTGTGCCCGCCCCCCACTCCCACTGTAGCTGCATCC
GTGCTTcacaccccctctcatacctcaccgcgtccgcagcagcagctgcc
gccgcaatcgcaactaccaccgcaggcgcgcccgcaaccgcagccgcaac
cacggccacaaccgcagtcacagccgcagccgcagtcgcagtcgcagccg
caaccgcagccgcagtcgcagtcgcagccgcagccgcaaccgcagccgca
gccgcagcagacaccgcagcaacggagggacagcgggagccagaaagcgc
ttgacgctcaggtgcgctcgttgatcagtcagtcgcccccggtaggcgaa
gcccgcagagtgtcttccccggttgtggagcgcgtgccatctccgcccgt
gtccgtctcggtgtgtcggacggaggttgtaatgtcgccgccgcctCGCG
ACGAGAGGGGCGTTGCCTTGACGCCCGCCAGTTCTTCGTCGGGCTTGGGC
GTGGTTAAAACCATCGTCAAGACCGAGCCTTCTATGAAGCGCGCTGTGTC
CAAGCCGCGAACCCCGCTTGCGAAGGCAACCCTATCGCTCAAGGCGAAGA
GGGAACGGGAGGCTGCCTTGTTCCCAAAGGAGATGCTTGTCGATTTGGAG
GGGACCACGTCTGCTCAGGTCAGGAAGATGAACCAGAACCAGAGGGAGTT
GGTTCTCTTCAAGAGAAAGCTGCGAAACAGAGAGTCTGCAAGACGGTCGA
GGCAGAAGAGGCAGGCCGTCATGGGTGAGCTCCAGACTGAGGTCGACGAG
CTTCGCAAGATTGCCATGGGCACGGCTGACGCTGCCCTTAACTTGAATCG
GGAGAACCGGGAACTCAGGAGACTCTTGCATCAGCGTGAACAACGCATCG
TGATGCTTGAGGAAGAGAACGATCGGTTGAAGAGACGTGTGACAAAAGAA
GACCTACATTCGTCAGTTTCCATTGAACGCAAGCTTGGTGCGTGA back to topCoding sequence (CDS) from alignment at tig00000170_pilon:145103..146347+ >Ggra9858.t1 ID=Ggra9858.t1|Name=Ggra9858.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=834bp|location=Sequence derived from alignment at tig00000170_pilon:145103..146347+ (Gracilaria gracilis GNS1m male)
ATGGACGGTGCTACCACCGACGCGTTCGCCGATTGGGGGCTCATGCCCAT
TTGCCCCATCATGCCCGAGGCCGATGTCGCTCCCATCGATGCCGACCTCG
ACTGGTCGCAGTACCCTTCCCTCTCCGATGCTATGCACGTCAGTCTGGAC
GGCGAATTGGCAAACCCTCTGGAAACCGTCGCCCGACGAACCCCAGAGCT
CAACTTGCCACATTCCCCGTCGCACCTCGCGCCCGCCACCCCCATCGACC
AACATCACTCCCCCgttgtaatgtcgccgccgcctCGCGACGAGAGGGGC
GTTGCCTTGACGCCCGCCAGTTCTTCGTCGGGCTTGGGCGTGGTTAAAAC
CATCGTCAAGACCGAGCCTTCTATGAAGCGCGCTGTGTCCAAGCCGCGAA
CCCCGCTTGCGAAGGCAACCCTATCGCTCAAGGCGAAGAGGGAACGGGAG
GCTGCCTTGTTCCCAAAGGAGATGCTTGTCGATTTGGAGGGGACCACGTC
TGCTCAGGTCAGGAAGATGAACCAGAACCAGAGGGAGTTGGTTCTCTTCA
AGAGAAAGCTGCGAAACAGAGAGTCTGCAAGACGGTCGAGGCAGAAGAGG
CAGGCCGTCATGGGTGAGCTCCAGACTGAGGTCGACGAGCTTCGCAAGAT
TGCCATGGGCACGGCTGACGCTGCCCTTAACTTGAATCGGGAGAACCGGG
AACTCAGGAGACTCTTGCATCAGCGTGAACAACGCATCGTGATGCTTGAG
GAAGAGAACGATCGGTTGAAGAGACGTGTGACAAAAGAAGACCTACATTC
GTCAGTTTCCATTGAACGCAAGCTTGGTGCGTGA back to top
|