Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9867.t1.stop1 | Ggra9867.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000170_pilon 162997..162999 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9867.t1.intron1 | Ggra9867.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000170_pilon 163450..163565 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9867.t1.start1 | Ggra9867.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000170_pilon 165387..165389 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9867.t1 ID=Ggra9867.t1|Name=Ggra9867.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp
MTNFLENDTAAEYERLRHAIGQPDFDSLPTSPHQPITEEELQQVPQPLRL
GDEHQGEANYNAIADKRCTGQEGNDAEKGNREEENKMATGEEEAEGNTEA
GSSRPSLQEAVEEGECPSDSGNGSGADAEEGEGVEASPQPSPPNNKEVLN
AQNHTSGSFDEFDRLTKGGEAMKREEMEESQRAITAHRSCEEDEKGMPIP
SHESEHHRHPQRVFKCEGEEGVAVQVDLDGNLTAATRRALKVQQANKAEL
GAVQVVDQPVALPRLSGDDEMAVDNVGVSQYPTQCHPSNAAEDILEAPPS
SPWERRAKFEVDDFFISSPPKPAKTPSRPTSRPFATHLTSSQQRAELFPS
PSPKSLGPPQADSVLPQAPLPHVPRNPAAITKPSTPELLHSQQQSAPNHK
GAPKPISGKDLAVQKPMMKGRASKERARKTFDTVAHGITQATGEKPVLVQ
NGRRVRVVKLPRPASTVCPPRPPRYPTPLPSTVKPTPEPLSVSQGLENIQ
REKVVKRSHPGSAEGHAELLKLLDTLGNLPPRPANGDEKLRAVASATDGY
RADAAVSSAIPTSGDANTTIGGNECPGRDPESQELGAETVAANSMASSPT
ARKSVKRKLELTAEERQEKKRIRAMRNRQSAEKSRRRRKEYAVSLESNVQ
KMRGESQEWRGNYYAGLKRLSEMQRDIREMYGDNHQIATPAMQDVVDDVG
HMVGRCPYTFRREEPEIELRSIGEDGRRGARGRGSRGGRARRAGRGSRVN
RGGRGEHP* back to topspliced messenger RNA >Ggra9867.t1 ID=Ggra9867.t1|Name=Ggra9867.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2277bp|location=Sequence derived from alignment at tig00000170_pilon:162997..165389- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGACAAACTTTCTTGAGAATGATACTGCCGCGGAGTACGAGCGCTTGCG
ACACGCAATTGGGCAACCGGATTTCGACTCATTGCCTACCAGTCCGCACC
AACCTATAACAGAGGAGGAGCTGCAGCAGGTGCCTCAACCTCTTCGTCTT
GGGGATGAACACCAGGGCGAAGCAAACTACAACGCCATCGCCGATAAGCG
CTGTACGGGTCAAGAGGGCAATGATGCAGAAAAAGGGAACAGGGAAGAAG
AAAACAAAATGGCAACGGGCGAAGAAGAAGCTGAAGGTAATACCGAAGCT
GGTTCGAGTCGTCCGAGTTTGCAGGAAGCGGTCGAGGAAGGCGAATGCCC
TTCTGACAGTGGCAACGGCAGCGGGGCTGACGCAGAAGAAGGCGAGGGCG
TGGAAGCTTCGCCTCAACCCTCCCCTCCCAACAACAAAGAAGTTCTAAAT
GCCCAAAATCACACATCGGGTAGCTTCGATGAGTTTGATCGTCTTACTAA
GGGAGGGGAGGCGATGAAGAGAGAGGAGATGGAAGAGAGCCAACGTGCAA
TCACTGCTCATAGAAGCTGCGAGGAGGATGAGAAAGGTATGCCCATTCCC
TCACACGAAAGTGAGCATCATCGACACCCACAACGCGTCTTCAAGTGTGA
GGGTGAAGAGGGTGTGGCTGTACAGGTGGATCTGGACGGCAACTTAACTG
CAGCTACCAGGAGGGCACTGAAAGTCCAACAGGCCAACAAAGCTGAGCTT
GGTGCAGTTCAGGTGGTTGACCAACCTGTAGCGCTGCCCAGGTTGTCAGG
CGACGATGAGATGGCAGTGGATAATGTGGGCGTATCCCAGTACCCAACGC
AATGCCACCCAAGTAACGCCGCCGAGGATATACTGGAAGCACCGCCATCA
AGTCCTTGGGAAAGAAGGGCAAAGTTCGAGGTTGATGACTTCTTCATCTC
ATCACCTCCGAAGCCCGCCAAGACTCCTTCACGCCCCACAAGCCGGCCGT
TTGCAACGCACTTAACTTCTTCGCAGCAACGCGCTGAGCTCTTCCCCTCT
CCTTCCCCAAAGAGCCTGGGACCTCCACAAGCAGACTCGGTGCTTCCCCA
GGCCCCGCTTCCACATGTCCCGCGGAATCCTGCCGCCATCACAAAGCCGA
GCACACCCGAGCTCCTCCACAGTCAGCAGCAGTCTGCTCCGAACCACAAA
GGAGCCCCAAAGCCCATCAGCGGGAAGGATCTCGCAGTTCAAAAACCGAT
GATGAAGGGCAGAGCTTCAAAGGAAAGGGCACGAAAGACATTCGACACTG
TCGCCCATGGGATCACACAAGCCACTGGTGAAAAGCCAGTGCTCGTGCAG
AATGGTCGCCGGGTGCGAGTCGTCAAGCTTCCGCGACCGGCTTCGACCGT
TTGTCCACCTCGACCCCCGCGCTACCCTACACCTCTCCCCTCCACCGTAA
AGCCGACTCCAGAACCCCTATCGGTATCTCAGGGTCTGGAAAATATTCAA
AGAGAGAAGGTCGTGAAGAGGAGCCACCCGGGCTCTGCTGAAGGCCACGC
AGAGCTTCTTAAGCTTTTGGACACCCTCGGCAATCTGCCGCCCCGACCTG
CGAACGGCGATGAGAAGCTTCGGGCGGTGGCATCTGCCACGGACGGATAT
CGAGCCGACGCAGCTGTCAGCTCGGCCATCCCCACAAGTGGAGATGCAAA
CACAACGATAGGTGGGAATGAATGCCCGGGGCGTGACCCAGAGTCACAAG
AATTGGGTGCGGAGACTGTGGCTGCTAACTCAATGGCGTCATCACCTACG
GCGCGTAAGTCCGTTAAGAGAAAGCTTGAACTAACGGCCGAGGAAAGACA
GGAAAAGAAGCGCATCCGAGCAATGCGAAACAGACAATCGGCCGAGAAGA
GTCGCCGTCGTCGCAAGGAGTACGCGGTGTCCCTGGAGTCAAACGTGCAG
AAAATGCGTGGAGAAAGCCAGGAATGGAGGGGGAACTACTACGCAGGTCT
CAAACGGCTTTCGGAAATGCAGCGGGATATACGGGAGATGTACGGGGACA
ACCATCAGATTGCAACGCCAGCCATGCAAGATGTGGTTGATGATGTAGGG
CACATGGTTGGAAGGTGTCCATATACCTTTAGAAGGGAGGAGCCGGAGAT
AGAGCTCCGCAGTATCGGCGAGGATGGACGGCGGGGAGCTCGTGGGCGAG
GAAGCCGAGGTGGACGTGCGAGAAGAGCTGGTCGAGGTAGCCGTGTCAAT
CGAGGCGGTCGCGGTGAGCATCCGTGA back to topprotein sequence of Ggra9867.t1 >Ggra9867.t1 ID=Ggra9867.t1|Name=Ggra9867.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=759bp
MTNFLENDTAAEYERLRHAIGQPDFDSLPTSPHQPITEEELQQVPQPLRL
GDEHQGEANYNAIADKRCTGQEGNDAEKGNREEENKMATGEEEAEGNTEA
GSSRPSLQEAVEEGECPSDSGNGSGADAEEGEGVEASPQPSPPNNKEVLN
AQNHTSGSFDEFDRLTKGGEAMKREEMEESQRAITAHRSCEEDEKGMPIP
SHESEHHRHPQRVFKCEGEEGVAVQVDLDGNLTAATRRALKVQQANKAEL
GAVQVVDQPVALPRLSGDDEMAVDNVGVSQYPTQCHPSNAAEDILEAPPS
SPWERRAKFEVDDFFISSPPKPAKTPSRPTSRPFATHLTSSQQRAELFPS
PSPKSLGPPQADSVLPQAPLPHVPRNPAAITKPSTPELLHSQQQSAPNHK
GAPKPISGKDLAVQKPMMKGRASKERARKTFDTVAHGITQATGEKPVLVQ
NGRRVRVVKLPRPASTVCPPRPPRYPTPLPSTVKPTPEPLSVSQGLENIQ
REKVVKRSHPGSAEGHAELLKLLDTLGNLPPRPANGDEKLRAVASATDGY
RADAAVSSAIPTSGDANTTIGGNECPGRDPESQELGAETVAANSMASSPT
ARKSVKRKLELTAEERQEKKRIRAMRNRQSAEKSRRRRKEYAVSLESNVQ
KMRGESQEWRGNYYAGLKRLSEMQRDIREMYGDNHQIATPAMQDVVDDVG
HMVGRCPYTFRREEPEIELRSIGEDGRRGARGRGSRGGRARRAGRGSRVN
RGGRGEHP* back to topmRNA from alignment at tig00000170_pilon:162997..165389- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9867.t1 ID=Ggra9867.t1|Name=Ggra9867.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2393bp|location=Sequence derived from alignment at tig00000170_pilon:162997..165389- (Gracilaria gracilis GNS1m male)
ATGACAAACTTTCTTGAGAATGATACTGCCGCGGAGTACGAGCGCTTGCG
ACACGCAATTGGGCAACCGGATTTCGACTCATTGCCTACCAGTCCGCACC
AACCTATAACAGAGGAGGAGCTGCAGCAGGTGCCTCAACCTCTTCGTCTT
GGGGATGAACACCAGGGCGAAGCAAACTACAACGCCATCGCCGATAAGCG
CTGTACGGGTCAAGAGGGCAATGATGCAGAAAAAGGGAACAGGGAAGAAG
AAAACAAAATGGCAACGGGCGAAGAAGAAGCTGAAGGTAATACCGAAGCT
GGTTCGAGTCGTCCGAGTTTGCAGGAAGCGGTCGAGGAAGGCGAATGCCC
TTCTGACAGTGGCAACGGCAGCGGGGCTGACGCAGAAGAAGGCGAGGGCG
TGGAAGCTTCGCCTCAACCCTCCCCTCCCAACAACAAAGAAGTTCTAAAT
GCCCAAAATCACACATCGGGTAGCTTCGATGAGTTTGATCGTCTTACTAA
GGGAGGGGAGGCGATGAAGAGAGAGGAGATGGAAGAGAGCCAACGTGCAA
TCACTGCTCATAGAAGCTGCGAGGAGGATGAGAAAGGTATGCCCATTCCC
TCACACGAAAGTGAGCATCATCGACACCCACAACGCGTCTTCAAGTGTGA
GGGTGAAGAGGGTGTGGCTGTACAGGTGGATCTGGACGGCAACTTAACTG
CAGCTACCAGGAGGGCACTGAAAGTCCAACAGGCCAACAAAGCTGAGCTT
GGTGCAGTTCAGGTGGTTGACCAACCTGTAGCGCTGCCCAGGTTGTCAGG
CGACGATGAGATGGCAGTGGATAATGTGGGCGTATCCCAGTACCCAACGC
AATGCCACCCAAGTAACGCCGCCGAGGATATACTGGAAGCACCGCCATCA
AGTCCTTGGGAAAGAAGGGCAAAGTTCGAGGTTGATGACTTCTTCATCTC
ATCACCTCCGAAGCCCGCCAAGACTCCTTCACGCCCCACAAGCCGGCCGT
TTGCAACGCACTTAACTTCTTCGCAGCAACGCGCTGAGCTCTTCCCCTCT
CCTTCCCCAAAGAGCCTGGGACCTCCACAAGCAGACTCGGTGCTTCCCCA
GGCCCCGCTTCCACATGTCCCGCGGAATCCTGCCGCCATCACAAAGCCGA
GCACACCCGAGCTCCTCCACAGTCAGCAGCAGTCTGCTCCGAACCACAAA
GGAGCCCCAAAGCCCATCAGCGGGAAGGATCTCGCAGTTCAAAAACCGAT
GATGAAGGGCAGAGCTTCAAAGGAAAGGGCACGAAAGACATTCGACACTG
TCGCCCATGGGATCACACAAGCCACTGGTGAAAAGCCAGTGCTCGTGCAG
AATGGTCGCCGGGTGCGAGTCGTCAAGCTTCCGCGACCGGCTTCGACCGT
TTGTCCACCTCGACCCCCGCGCTACCCTACACCTCTCCCCTCCACCGTAA
AGCCGACTCCAGAACCCCTATCGGTATCTCAGGGTCTGGAAAATATTCAA
AGAGAGAAGGTCGTGAAGAGGAGCCACCCGGGCTCTGCTGAAGGCCACGC
AGAGCTTCTTAAGCTTTTGGACACCCTCGGCAATCTGCCGCCCCGACCTG
CGAACGGCGATGAGAAGCTTCGGGCGGTGGCATCTGCCACGGACGGATAT
CGAGCCGACGCAGCTGTCAGCTCGGCCATCCCCACAAGTGGAGATGCAAA
CACAACGATAGGTGGGAATGAATGCCCGGGGCGTGACCCAGAGTCACAAG
AATTGGGTGCGGAGACTGTGGCTGCTAACTCAATGGCGTCATCACCTACG
GCGCGTAAGTCCGTTAAGAGAAAGGTATGTGTTGGAAGCCTTTGTTGTCG
CTTGCTATGATACCTCTGTGATGTGATTAGAAGTCTGACTCTTGTTTTCC
ATTCCCTTCTTTGTGTTGATTGACATTTGTTGAAACGTAGCTTGAACTAA
CGGCCGAGGAAAGACAGGAAAAGAAGCGCATCCGAGCAATGCGAAACAGA
CAATCGGCCGAGAAGAGTCGCCGTCGTCGCAAGGAGTACGCGGTGTCCCT
GGAGTCAAACGTGCAGAAAATGCGTGGAGAAAGCCAGGAATGGAGGGGGA
ACTACTACGCAGGTCTCAAACGGCTTTCGGAAATGCAGCGGGATATACGG
GAGATGTACGGGGACAACCATCAGATTGCAACGCCAGCCATGCAAGATGT
GGTTGATGATGTAGGGCACATGGTTGGAAGGTGTCCATATACCTTTAGAA
GGGAGGAGCCGGAGATAGAGCTCCGCAGTATCGGCGAGGATGGACGGCGG
GGAGCTCGTGGGCGAGGAAGCCGAGGTGGACGTGCGAGAAGAGCTGGTCG
AGGTAGCCGTGTCAATCGAGGCGGTCGCGGTGAGCATCCGTGA back to topCoding sequence (CDS) from alignment at tig00000170_pilon:162997..165389- >Ggra9867.t1 ID=Ggra9867.t1|Name=Ggra9867.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2277bp|location=Sequence derived from alignment at tig00000170_pilon:162997..165389- (Gracilaria gracilis GNS1m male)
ATGACAAACTTTCTTGAGAATGATACTGCCGCGGAGTACGAGCGCTTGCG
ACACGCAATTGGGCAACCGGATTTCGACTCATTGCCTACCAGTCCGCACC
AACCTATAACAGAGGAGGAGCTGCAGCAGGTGCCTCAACCTCTTCGTCTT
GGGGATGAACACCAGGGCGAAGCAAACTACAACGCCATCGCCGATAAGCG
CTGTACGGGTCAAGAGGGCAATGATGCAGAAAAAGGGAACAGGGAAGAAG
AAAACAAAATGGCAACGGGCGAAGAAGAAGCTGAAGGTAATACCGAAGCT
GGTTCGAGTCGTCCGAGTTTGCAGGAAGCGGTCGAGGAAGGCGAATGCCC
TTCTGACAGTGGCAACGGCAGCGGGGCTGACGCAGAAGAAGGCGAGGGCG
TGGAAGCTTCGCCTCAACCCTCCCCTCCCAACAACAAAGAAGTTCTAAAT
GCCCAAAATCACACATCGGGTAGCTTCGATGAGTTTGATCGTCTTACTAA
GGGAGGGGAGGCGATGAAGAGAGAGGAGATGGAAGAGAGCCAACGTGCAA
TCACTGCTCATAGAAGCTGCGAGGAGGATGAGAAAGGTATGCCCATTCCC
TCACACGAAAGTGAGCATCATCGACACCCACAACGCGTCTTCAAGTGTGA
GGGTGAAGAGGGTGTGGCTGTACAGGTGGATCTGGACGGCAACTTAACTG
CAGCTACCAGGAGGGCACTGAAAGTCCAACAGGCCAACAAAGCTGAGCTT
GGTGCAGTTCAGGTGGTTGACCAACCTGTAGCGCTGCCCAGGTTGTCAGG
CGACGATGAGATGGCAGTGGATAATGTGGGCGTATCCCAGTACCCAACGC
AATGCCACCCAAGTAACGCCGCCGAGGATATACTGGAAGCACCGCCATCA
AGTCCTTGGGAAAGAAGGGCAAAGTTCGAGGTTGATGACTTCTTCATCTC
ATCACCTCCGAAGCCCGCCAAGACTCCTTCACGCCCCACAAGCCGGCCGT
TTGCAACGCACTTAACTTCTTCGCAGCAACGCGCTGAGCTCTTCCCCTCT
CCTTCCCCAAAGAGCCTGGGACCTCCACAAGCAGACTCGGTGCTTCCCCA
GGCCCCGCTTCCACATGTCCCGCGGAATCCTGCCGCCATCACAAAGCCGA
GCACACCCGAGCTCCTCCACAGTCAGCAGCAGTCTGCTCCGAACCACAAA
GGAGCCCCAAAGCCCATCAGCGGGAAGGATCTCGCAGTTCAAAAACCGAT
GATGAAGGGCAGAGCTTCAAAGGAAAGGGCACGAAAGACATTCGACACTG
TCGCCCATGGGATCACACAAGCCACTGGTGAAAAGCCAGTGCTCGTGCAG
AATGGTCGCCGGGTGCGAGTCGTCAAGCTTCCGCGACCGGCTTCGACCGT
TTGTCCACCTCGACCCCCGCGCTACCCTACACCTCTCCCCTCCACCGTAA
AGCCGACTCCAGAACCCCTATCGGTATCTCAGGGTCTGGAAAATATTCAA
AGAGAGAAGGTCGTGAAGAGGAGCCACCCGGGCTCTGCTGAAGGCCACGC
AGAGCTTCTTAAGCTTTTGGACACCCTCGGCAATCTGCCGCCCCGACCTG
CGAACGGCGATGAGAAGCTTCGGGCGGTGGCATCTGCCACGGACGGATAT
CGAGCCGACGCAGCTGTCAGCTCGGCCATCCCCACAAGTGGAGATGCAAA
CACAACGATAGGTGGGAATGAATGCCCGGGGCGTGACCCAGAGTCACAAG
AATTGGGTGCGGAGACTGTGGCTGCTAACTCAATGGCGTCATCACCTACG
GCGCGTAAGTCCGTTAAGAGAAAGCTTGAACTAACGGCCGAGGAAAGACA
GGAAAAGAAGCGCATCCGAGCAATGCGAAACAGACAATCGGCCGAGAAGA
GTCGCCGTCGTCGCAAGGAGTACGCGGTGTCCCTGGAGTCAAACGTGCAG
AAAATGCGTGGAGAAAGCCAGGAATGGAGGGGGAACTACTACGCAGGTCT
CAAACGGCTTTCGGAAATGCAGCGGGATATACGGGAGATGTACGGGGACA
ACCATCAGATTGCAACGCCAGCCATGCAAGATGTGGTTGATGATGTAGGG
CACATGGTTGGAAGGTGTCCATATACCTTTAGAAGGGAGGAGCCGGAGAT
AGAGCTCCGCAGTATCGGCGAGGATGGACGGCGGGGAGCTCGTGGGCGAG
GAAGCCGAGGTGGACGTGCGAGAAGAGCTGGTCGAGGTAGCCGTGTCAAT
CGAGGCGGTCGCGGTGAGCATCCGTGA back to top
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