Ggra9879.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9879.t1
Unique NameGgra9879.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length676
Homology
BLAST of Ggra9879.t1 vs. uniprot
Match: A0A2V3J5H1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5H1_9FLOR)

HSP 1 Score: 606 bits (1563), Expect = 1.880e-207
Identity = 375/697 (53.80%), Postives = 446/697 (63.99%), Query Frame = 0
Query:    5 NAAVHASRPGADLDRYAPNSSLPLLVRMPNGEDHQVDMPSNALVKDLKTSIANLPWQPSGNDPQQQSLELEFGGETLNENEPLSSYNIPEAYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMQRLISAVFDDVNDDTPASPSAQPSLSAMKRSRISRIPSLNLGAXXXXXXDGKSTTKLFSPSAPPTPRQLMRTLSSLRPDLYDTEAADKATSSLSLGNLANLANNVPTRVSEPPIHGSGELKRGNTWFHDIMTSINTSLRDPRKGGAIDHDDRD---EVEGDSEGEDDVAADEGNTSNDLNASRSTAPRGA-----LGLGDMMKQGNS---SLADNNRNNSSATAMKDEKPIAGS---------SSMTEGNTMTATR--TALDDRSISKPSFEASSEAATPQKIDSKATESQETGRSTSEASNANLQTPQKQTTPSSASKTVVPTHPIANQDKQVIGLTPERQAPG---EEVKQPKKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSRIRRKHMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRSIPQVHPSMIP-QSTAALGQGPQSRLNTAINPHVPMAAQPGISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDALVGRTQALSGSRPLGPNAPSQSNPLTNFRYKNF 675
            N   ++S   A LDRY   +SLPLLVRMP+GE+HQVD+P NA VKDLKTSIANLPWQ S +DPQQQSLELEFGGETLN+N+ LS YNIPE YDHADGFLKTISDSGYLD +KKVEALDKACAVVRGISRGEKDM+RL+ AVFDD++DDTP SPSAQPSL +M+RSR SRIPSLN GA       G+S ++LFSPSAPPTPRQLMR LS LRPDLYDT AA+KATSSLSL    N+ N    R +E    G+GELKRGNTWF DIMT+IN+S RDPRK G ++ DD+D   +VEG+SEGE          S DL A       GA     + LGD++KQ  S   S+  +   +   T++   KP             SS+ +  +  A    +AL  ++   P      E A P   D K T +Q +                 Q  PSS S  V+P  PI NQDKQVIGLTPERQ P    +E + P++RGRKRKNPHL+EE+R+ Q  AQNRESAKLSRIRRKHMT+EYE+RVN+LEGENENLR TIS LEDRLQMLQNLLTI+VQRR+IPQVHPSM+P QS A +  G Q+RL+ A+  +V +A Q G+                                                 N  ++G  Q L GS P+  +  SQSNPL N RYK F
Sbjct:    3 NTNENSSSGAAALDRYGAGASLPLLVRMPDGENHQVDVPPNASVKDLKTSIANLPWQLSDSDPQQQSLELEFGGETLNDNQTLSHYNIPEVYDHADGFLKTISDSGYLDHEKKVEALDKACAVVRGISRGEKDMERLLGAVFDDLHDDTPGSPSAQPSLRSMRRSRPSRIPSLNFGALNPIGVGGRSNSRLFSPSAPPTPRQLMRKLSLLRPDLYDTAAAEKATSSLSLAIPTNIGNKSAVRANESQSQGNGELKRGNTWFQDIMTTINSSHRDPRKRGDLNDDDQDHGDDVEGNSEGE---------NSEDLEALTDPNASGAKSSTLVELGDILKQSTSPTNSIKTDGTASQPGTSLV-SKPTQNDQLKFNEQQQSSVDDAKSSAAPAGDSALTTKAQGGPEKSLKVEGALPTSTDGKGTTNQGSA---------------SQPPPSSNSTKVIPGRPIPNQDKQVIGLTPERQTPATASQEPRLPRRRGRKRKNPHLSEEERKAQXXAQNRESAKLSRIRRKHMTLEYERRVNSLEGENENLRGTISALEDRLQMLQNLLTISVQRRAIPQVHPSMMPPQSNAPMLPGGQNRLSAALGTNVSIAGQQGL-----VPGALNAQAMLANQSVMGRAGISLHGGMMQTQVPGSSQRPPINTNGTMMGAPQTLPGSAPMRQSGSSQSNPLANLRYKTF 669          
BLAST of Ggra9879.t1 vs. uniprot
Match: A0A1X6P6M8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6M8_PORUM)

HSP 1 Score: 81.6 bits (200), Expect = 2.750e-12
Identity = 53/139 (38.13%), Postives = 79/139 (56.83%), Query Frame = 0
Query:   10 ASRPGADLDRYAPNSS---LPLLVRMPNGEDHQVDMPSNALVKDLKTSIANL-PWQPSGNDPQQQSLELEFGGETLNENEP-LSSYNIPEAYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMQRLIS 143
            A  P  D++R    SS   +PLLVR+P+GE  Q+D+P++A V D++  IA   P  P+      + + L++ G  LN+    L  Y+IP+ YD A G L+ I   G   P     A+D A AVV   SRGE++M+RL++
Sbjct:  103 APTPPPDVERRGSASSSLSIPLLVRLPSGEKTQLDVPADATVGDVRRRIAAASPEMPAA----MEGVRLQWAGTELNDPAAALDDYHIPDTYDQAFGLLRAIDSRGA--PGVTAAAMDTAVAVVSSASRGERNMERLVA 235          
BLAST of Ggra9879.t1 vs. uniprot
Match: A0A7S1T822 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T822_9RHOD)

HSP 1 Score: 77.8 bits (190), Expect = 2.230e-11
Identity = 40/84 (47.62%), Postives = 62/84 (73.81%), Query Frame = 0
Query:  467 PKKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSRIRRKHMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRS 550
            P+KRGRKRK PHLTEE+RR  R+ +NRESA+ SR R++++  +YE ++  +  EN++L   +S L +RL+ L+ +LT+ V+ RS
Sbjct:  388 PRKRGRKRKFPHLTEEERRTMRRDRNRESARRSRDRKRNIQKQYESKITAVRKENDSLEGQVSALSNRLEFLKQILTVHVRSRS 471          
BLAST of Ggra9879.t1 vs. uniprot
Match: A0A2V3ITI3 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI3_9FLOR)

HSP 1 Score: 71.6 bits (174), Expect = 2.240e-11
Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 0
Query:  468 KKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSRIRRKHMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQ 547
            KKRGRK KNP LT+E+R L R+ QN E AKLSR+RRK    EYE  +N L  EN  L+  +   E+RL  +Q+LLT++VQ
Sbjct:   30 KKRGRKCKNPELTDEERVLWRKQQNTEGAKLSRVRRKVNGAEYESNLNVLINENTMLKKQVDEHENRLACMQSLLTVSVQ 109          
BLAST of Ggra9879.t1 vs. uniprot
Match: A0A7S0T7X4 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7X4_9RHOD)

HSP 1 Score: 70.1 bits (170), Expect = 2.370e-9
Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 0
Query:  463 EVKQPKKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSRIRRKHMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITV 546
            ++K PKKRGRKRKNP LT+ QR  +R+ QNR SAK SR ++K  T+E+ +R+ T+  EN++L+  +  L  RL ++Q LL + V
Sbjct:  222 DLKVPKKRGRKRKNPQLTDAQRMEERKMQNRASAKKSREKKKVQTVEHVQRIETILHENQSLKAELEHLGKRLDLMQQLLAVQV 305          
BLAST of Ggra9879.t1 vs. uniprot
Match: M2XXC4 (BZIP transcription factor isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXC4_GALSU)

HSP 1 Score: 68.9 bits (167), Expect = 1.440e-8
Identity = 124/528 (23.48%), Postives = 209/528 (39.58%), Query Frame = 0
Query:   23 NSSLPLLVRMPNGEDHQVDMPSNALVKDLKTSIANLPWQPSGNDPQQQSLELEFGGETLNENEPLSSYNIPEAYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMQRLISAVFDD--VNDDTPASPSA----QPSLSAMKRSRISRIPSLNLGAXXXXXXDGKSTTKLFSPSAPPTPRQLMRTLSSLRPDLYDTEAADKATSSLSLGN--LANLANNVPTRVSEPPIHG--SGELKRG-----NTWFHDIMTSINTSLRDPRKGGAIDHDDRDEVEGDSEGEDDVAADEGNTSNDLNASRSTAPRGALGLGDMMKQGNSSLADNNRNNSSATAMKDEKPIAGSSSMTEGNTMT--ATRTALDDRSISKPSFEASSEAATPQKIDSKATESQETGRSTSEASNANLQTPQKQTTPSSASKTVVPTHPIANQDKQVIGLTPERQAPGEEVKQPKKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSRIRRKHMTMEYEKRVNTLEGENENLRDTISGLED 533
            + + PLL+ +P+G+  Q+ +     + D+K  +                L   FG   L +N+ L  Y IPE Y+  +  L+ I + G LDP KK EAL++ C VV  +  G  D + L+S V  D  + +    + +A    Q S S   +S + + P+ +  +       G S T      +  +   +    S + P L   E  D+  + +   +   A L +  P   +   +    SG   R      +T FH   +S+ +S  D   G                          N ++ L  S++        + +     N    D N           EK     S  TE N+    + + + D+      S ++SS+     +  S    + ++  S S + N N          S+ +   +    I+N +K              E +  K+RGRKRK+P +TEE+R+  R  QNR SA+ SR R+K     Y+KR+  L  EN+ LR T+  L++
Sbjct:    5 DETFPLLLDLPDGQRRQLQVSVYDTIGDVKKKLCE-------EFHFIDMLHFHFGNIELQDNKTLYDYGIPEIYEQTESLLRMI-ELGGLDPQKKPEALERMCIVVESMKNGVTDPKELVSVVKRDSKITETNARTGNANRHEQSSCSKQAQSNVVQPPT-SPRSFTSVTKQGNSQTSAVGFHSAVSSSNVDTKPSIISPKL-PLERLDEPNTLVDNNDDLFARLTDYFPDLFTPKGLSSLRSGATPRAWTTPRDTGFHMEESSLVSSPVDWVTGT-------------------------NDNHSLLGSQAIKDNAPNWIREFTSNWNVLPQDRN-----------EKSPKRRSRQTEANSSVYDSFQNSGDEHENLSVSNDSSSDREELLECKSGEYSTNQSTYSGSHSDNTN----------SNHNNPTLDDDHISNMEKH-------------ETRTVKRRGRKRKHPEMTEEERKAYRAMQNRRSAERSRQRKKIQQEAYQKRMEELCTENDELRSTVQALQE 463          
BLAST of Ggra9879.t1 vs. uniprot
Match: A0A2V3IMV7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMV7_9FLOR)

HSP 1 Score: 55.5 bits (132), Expect = 5.400e-6
Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:  468 KKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSRIRRKHMTMEYEKRVNTL 517
            K+RGRKRKNP LT+E+R L R+ QNRESAKLS +RRK +  EYE ++N L
Sbjct:   40 KRRGRKRKNPELTDEERILWRKHQNRESAKLSLVRRKVIAAEYEGKLNAL 89          
The following BLAST results are available for this feature:
BLAST of Ggra9879.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J5H11.880e-20753.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P6M82.750e-1238.13Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1T8222.230e-1147.62Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3ITI32.240e-1153.75BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A7S0T7X42.370e-947.62Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
M2XXC41.440e-823.48BZIP transcription factor isoform 1 n=2 Tax=Galdie... [more]
A0A2V3IMV75.400e-664.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 479..499
NoneNo IPR availableCOILSCoilCoilcoord: 507..541
NoneNo IPR availableGENE3D1.20.5.170coord: 468..544
e-value: 4.4E-9
score: 38.2
NoneNo IPR availableGENE3D3.10.20.90coord: 21..103
e-value: 5.3E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 291..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 645..675
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..443
NoneNo IPR availableCDDcd14686bZIPcoord: 485..536
e-value: 7.27311E-9
score: 50.2365
NoneNo IPR availableCDDcd17039Ubl_ubiquitin_likecoord: 28..92
e-value: 1.07051E-5
score: 41.813
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 484..542
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 480..544
e-value: 1.5E-9
score: 47.7
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 481..539
e-value: 7.5E-10
score: 38.8
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 482..545
score: 10.989942
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 26..94
score: 11.224428
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 18..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:195793..197820 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9879.t1Ggra9879.t1Gracilaria gracilis GNS1m malemRNAtig00000170_pilon 195793..197820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9879.t1 ID=Ggra9879.t1|Name=Ggra9879.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=676bp
MTHKNAAVHASRPGADLDRYAPNSSLPLLVRMPNGEDHQVDMPSNALVKD
LKTSIANLPWQPSGNDPQQQSLELEFGGETLNENEPLSSYNIPEAYDHAD
GFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMQRLISAVFDDVN
DDTPASPSAQPSLSAMKRSRISRIPSLNLGALGSFGADGKSTTKLFSPSA
PPTPRQLMRTLSSLRPDLYDTEAADKATSSLSLGNLANLANNVPTRVSEP
PIHGSGELKRGNTWFHDIMTSINTSLRDPRKGGAIDHDDRDEVEGDSEGE
DDVAADEGNTSNDLNASRSTAPRGALGLGDMMKQGNSSLADNNRNNSSAT
AMKDEKPIAGSSSMTEGNTMTATRTALDDRSISKPSFEASSEAATPQKID
SKATESQETGRSTSEASNANLQTPQKQTTPSSASKTVVPTHPIANQDKQV
IGLTPERQAPGEEVKQPKKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSR
IRRKHMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRS
IPQVHPSMIPQSTAALGQGPQSRLNTAINPHVPMAAQPGISSQAGLVSRA
LNAQALLSSQNVMARAGAASHAGMMHAQNQLNTQRPLNTNDALVGRTQAL
SGSRPLGPNAPSQSNPLTNFRYKNF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf