Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9879.t1.stop1 | Ggra9879.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000170_pilon 195793..195795 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9879.t1.start1 | Ggra9879.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000170_pilon 197818..197820 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9879.t1 ID=Ggra9879.t1|Name=Ggra9879.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=676bp
MTHKNAAVHASRPGADLDRYAPNSSLPLLVRMPNGEDHQVDMPSNALVKD
LKTSIANLPWQPSGNDPQQQSLELEFGGETLNENEPLSSYNIPEAYDHAD
GFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMQRLISAVFDDVN
DDTPASPSAQPSLSAMKRSRISRIPSLNLGALGSFGADGKSTTKLFSPSA
PPTPRQLMRTLSSLRPDLYDTEAADKATSSLSLGNLANLANNVPTRVSEP
PIHGSGELKRGNTWFHDIMTSINTSLRDPRKGGAIDHDDRDEVEGDSEGE
DDVAADEGNTSNDLNASRSTAPRGALGLGDMMKQGNSSLADNNRNNSSAT
AMKDEKPIAGSSSMTEGNTMTATRTALDDRSISKPSFEASSEAATPQKID
SKATESQETGRSTSEASNANLQTPQKQTTPSSASKTVVPTHPIANQDKQV
IGLTPERQAPGEEVKQPKKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSR
IRRKHMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRS
IPQVHPSMIPQSTAALGQGPQSRLNTAINPHVPMAAQPGISSQAGLVSRA
LNAQALLSSQNVMARAGAASHAGMMHAQNQLNTQRPLNTNDALVGRTQAL
SGSRPLGPNAPSQSNPLTNFRYKNF* back to topspliced messenger RNA >Ggra9879.t1 ID=Ggra9879.t1|Name=Ggra9879.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2028bp|location=Sequence derived from alignment at tig00000170_pilon:195793..197820- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGACTCACAAGAACGCCGCGGTTCATGCGTCGCGTCCCGGCGCAGACCT
CGATCGCTATGCGCCCAACTCCTCTCTTCCTCTCCTTGTGCGTATGCCCA
ACGGCGAGGACCATCAAGTCGATATGCCCTCAAATGCCCTAGTCAAAGAT
CTCAAGACTTCCATTGCTAATTTGCCATGGCAACCCTCCGGCAATGACCC
CCAACAACAGTCGCTCGAGCTCGAATTTGGTGGCGAGACGCTCAATGAAA
ACGAACCCCTCAGCAGCTACAACATCCCGGAAGCGTATGACCATGCCGAT
GGTTTCTTGAAAACCATCTCGGATAGCGGTTACCTCGATCCCGATAAGAA
AGTGGAAGCGCTTGATAAGGCGTGCGCTGTTGTTCGCGGTATCTCGCGCG
GAGAGAAAGACATGCAGCGTCTCATAAGCGCCGTGTTCGACGACGTTAAC
GACGACACGCCAGCCTCCCCGTCCGCGCAACCTTCACTAAGCGCCATGAA
ACGTTCCCGTATCAGCCGCATACCATCGCTGAACCTTGGAGCCCTCGGTT
CATTTGGCGCTGATGGAAAGTCAACCACTAAGCTATTTTCTCCTTCAGCG
CCACCTACGCCTCGACAGCTCATGCGAACGCTCAGCTCGCTCCGTCCCGA
CTTATACGACACGGAGGCTGCTGACAAGGCCACCAGCTCCTTATCTTTGG
GTAATCTCGCAAACTTGGCGAACAATGTACCCACGCGTGTTAGTGAGCCC
CCAATTCACGGAAGTGGGGAACTGAAGAGGGGGAACACGTGGTTTCATGA
CATTATGACTTCAATCAATACCTCTCTGCGTGATCCTAGAAAAGGAGGTG
CCATTGATCATGACGACCGCGATGAAGTAGAAGGTGATAGTGAGGGCGAG
GATGACGTTGCAGCAGATGAAGGAAATACCTCGAATGACCTCAATGCATC
TCGTTCCACTGCTCCTCGAGGAGCCCTTGGCCTTGGGGATATGATGAAAC
AGGGCAATTCGTCATTAGCGGATAATAATAGAAACAATTCGTCAGCCACT
GCTATGAAGGACGAGAAGCCCATCGCAGGCTCGTCTTCGATGACAGAAGG
GAACACAATGACTGCTACCAGGACCGCCTTAGACGACCGGTCGATCTCAA
AGCCAAGCTTTGAGGCAAGTTCAGAAGCAGCAACTCCACAAAAAATCGAC
TCCAAGGCCACGGAATCACAGGAGACAGGGCGAAGTACAAGTGAAGCATC
GAACGCGAACCTTCAAACGCCTCAGAAACAAACGACCCCGTCTAGCGCGT
CGAAAACTGTCGTGCCCACTCACCCAATTGCGAACCAAGACAAGCAGGTC
ATTGGCCTCACCCCAGAGCGTCAAGCCCCAGGGGAGGAGGTGAAGCAGCC
AAAGAAACGGGGCAGGAAACGGAAGAACCCTCATCTGACGGAGGAGCAAA
GAAGATTACAAAGGCAAGCGCAGAACCGAGAAAGCGCCAAACTGTCTCGA
ATTCGTCGAAAGCACATGACAATGGAATACGAAAAGAGAGTGAACACTCT
CGAAGGAGAGAATGAAAACCTCCGCGACACTATTAGCGGACTGGAAGATC
GTCTACAAATGCTGCAGAACTTGCTCACGATAACAGTGCAAAGGAGAAGC
ATCCCGCAAGTTCACCCGTCAATGATTCCGCAGTCCACCGCCGCTCTTGG
CCAAGGGCCGCAGAGCCGACTCAACACGGCAATTAATCCTCACGTGCCGA
TGGCCGCCCAACCGGGCATTAGCTCACAAGCAGGACTGGTTTCGCGGGCC
CTCAACGCACAGGCTCTATTAAGCAGTCAGAATGTAATGGCTCGTGCCGG
GGCAGCGTCACATGCTGGTATGATGCACGCACAGAACCAGCTCAACACAC
AACGTCCCCTCAACACAAACGACGCTTTGGTAGGTCGCACGCAAGCCCTT
TCAGGTTCAAGGCCTTTAGGACCAAATGCGCCGTCGCAATCAAACCCCTT
GACAAACTTTCGGTACAAAAACTTCTGA back to topprotein sequence of Ggra9879.t1 >Ggra9879.t1 ID=Ggra9879.t1|Name=Ggra9879.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=676bp
MTHKNAAVHASRPGADLDRYAPNSSLPLLVRMPNGEDHQVDMPSNALVKD
LKTSIANLPWQPSGNDPQQQSLELEFGGETLNENEPLSSYNIPEAYDHAD
GFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMQRLISAVFDDVN
DDTPASPSAQPSLSAMKRSRISRIPSLNLGALGSFGADGKSTTKLFSPSA
PPTPRQLMRTLSSLRPDLYDTEAADKATSSLSLGNLANLANNVPTRVSEP
PIHGSGELKRGNTWFHDIMTSINTSLRDPRKGGAIDHDDRDEVEGDSEGE
DDVAADEGNTSNDLNASRSTAPRGALGLGDMMKQGNSSLADNNRNNSSAT
AMKDEKPIAGSSSMTEGNTMTATRTALDDRSISKPSFEASSEAATPQKID
SKATESQETGRSTSEASNANLQTPQKQTTPSSASKTVVPTHPIANQDKQV
IGLTPERQAPGEEVKQPKKRGRKRKNPHLTEEQRRLQRQAQNRESAKLSR
IRRKHMTMEYEKRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRS
IPQVHPSMIPQSTAALGQGPQSRLNTAINPHVPMAAQPGISSQAGLVSRA
LNAQALLSSQNVMARAGAASHAGMMHAQNQLNTQRPLNTNDALVGRTQAL
SGSRPLGPNAPSQSNPLTNFRYKNF* back to topmRNA from alignment at tig00000170_pilon:195793..197820- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9879.t1 ID=Ggra9879.t1|Name=Ggra9879.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2028bp|location=Sequence derived from alignment at tig00000170_pilon:195793..197820- (Gracilaria gracilis GNS1m male)
ATGACTCACAAGAACGCCGCGGTTCATGCGTCGCGTCCCGGCGCAGACCT
CGATCGCTATGCGCCCAACTCCTCTCTTCCTCTCCTTGTGCGTATGCCCA
ACGGCGAGGACCATCAAGTCGATATGCCCTCAAATGCCCTAGTCAAAGAT
CTCAAGACTTCCATTGCTAATTTGCCATGGCAACCCTCCGGCAATGACCC
CCAACAACAGTCGCTCGAGCTCGAATTTGGTGGCGAGACGCTCAATGAAA
ACGAACCCCTCAGCAGCTACAACATCCCGGAAGCGTATGACCATGCCGAT
GGTTTCTTGAAAACCATCTCGGATAGCGGTTACCTCGATCCCGATAAGAA
AGTGGAAGCGCTTGATAAGGCGTGCGCTGTTGTTCGCGGTATCTCGCGCG
GAGAGAAAGACATGCAGCGTCTCATAAGCGCCGTGTTCGACGACGTTAAC
GACGACACGCCAGCCTCCCCGTCCGCGCAACCTTCACTAAGCGCCATGAA
ACGTTCCCGTATCAGCCGCATACCATCGCTGAACCTTGGAGCCCTCGGTT
CATTTGGCGCTGATGGAAAGTCAACCACTAAGCTATTTTCTCCTTCAGCG
CCACCTACGCCTCGACAGCTCATGCGAACGCTCAGCTCGCTCCGTCCCGA
CTTATACGACACGGAGGCTGCTGACAAGGCCACCAGCTCCTTATCTTTGG
GTAATCTCGCAAACTTGGCGAACAATGTACCCACGCGTGTTAGTGAGCCC
CCAATTCACGGAAGTGGGGAACTGAAGAGGGGGAACACGTGGTTTCATGA
CATTATGACTTCAATCAATACCTCTCTGCGTGATCCTAGAAAAGGAGGTG
CCATTGATCATGACGACCGCGATGAAGTAGAAGGTGATAGTGAGGGCGAG
GATGACGTTGCAGCAGATGAAGGAAATACCTCGAATGACCTCAATGCATC
TCGTTCCACTGCTCCTCGAGGAGCCCTTGGCCTTGGGGATATGATGAAAC
AGGGCAATTCGTCATTAGCGGATAATAATAGAAACAATTCGTCAGCCACT
GCTATGAAGGACGAGAAGCCCATCGCAGGCTCGTCTTCGATGACAGAAGG
GAACACAATGACTGCTACCAGGACCGCCTTAGACGACCGGTCGATCTCAA
AGCCAAGCTTTGAGGCAAGTTCAGAAGCAGCAACTCCACAAAAAATCGAC
TCCAAGGCCACGGAATCACAGGAGACAGGGCGAAGTACAAGTGAAGCATC
GAACGCGAACCTTCAAACGCCTCAGAAACAAACGACCCCGTCTAGCGCGT
CGAAAACTGTCGTGCCCACTCACCCAATTGCGAACCAAGACAAGCAGGTC
ATTGGCCTCACCCCAGAGCGTCAAGCCCCAGGGGAGGAGGTGAAGCAGCC
AAAGAAACGGGGCAGGAAACGGAAGAACCCTCATCTGACGGAGGAGCAAA
GAAGATTACAAAGGCAAGCGCAGAACCGAGAAAGCGCCAAACTGTCTCGA
ATTCGTCGAAAGCACATGACAATGGAATACGAAAAGAGAGTGAACACTCT
CGAAGGAGAGAATGAAAACCTCCGCGACACTATTAGCGGACTGGAAGATC
GTCTACAAATGCTGCAGAACTTGCTCACGATAACAGTGCAAAGGAGAAGC
ATCCCGCAAGTTCACCCGTCAATGATTCCGCAGTCCACCGCCGCTCTTGG
CCAAGGGCCGCAGAGCCGACTCAACACGGCAATTAATCCTCACGTGCCGA
TGGCCGCCCAACCGGGCATTAGCTCACAAGCAGGACTGGTTTCGCGGGCC
CTCAACGCACAGGCTCTATTAAGCAGTCAGAATGTAATGGCTCGTGCCGG
GGCAGCGTCACATGCTGGTATGATGCACGCACAGAACCAGCTCAACACAC
AACGTCCCCTCAACACAAACGACGCTTTGGTAGGTCGCACGCAAGCCCTT
TCAGGTTCAAGGCCTTTAGGACCAAATGCGCCGTCGCAATCAAACCCCTT
GACAAACTTTCGGTACAAAAACTTCTGA back to topCoding sequence (CDS) from alignment at tig00000170_pilon:195793..197820- >Ggra9879.t1 ID=Ggra9879.t1|Name=Ggra9879.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2028bp|location=Sequence derived from alignment at tig00000170_pilon:195793..197820- (Gracilaria gracilis GNS1m male)
ATGACTCACAAGAACGCCGCGGTTCATGCGTCGCGTCCCGGCGCAGACCT
CGATCGCTATGCGCCCAACTCCTCTCTTCCTCTCCTTGTGCGTATGCCCA
ACGGCGAGGACCATCAAGTCGATATGCCCTCAAATGCCCTAGTCAAAGAT
CTCAAGACTTCCATTGCTAATTTGCCATGGCAACCCTCCGGCAATGACCC
CCAACAACAGTCGCTCGAGCTCGAATTTGGTGGCGAGACGCTCAATGAAA
ACGAACCCCTCAGCAGCTACAACATCCCGGAAGCGTATGACCATGCCGAT
GGTTTCTTGAAAACCATCTCGGATAGCGGTTACCTCGATCCCGATAAGAA
AGTGGAAGCGCTTGATAAGGCGTGCGCTGTTGTTCGCGGTATCTCGCGCG
GAGAGAAAGACATGCAGCGTCTCATAAGCGCCGTGTTCGACGACGTTAAC
GACGACACGCCAGCCTCCCCGTCCGCGCAACCTTCACTAAGCGCCATGAA
ACGTTCCCGTATCAGCCGCATACCATCGCTGAACCTTGGAGCCCTCGGTT
CATTTGGCGCTGATGGAAAGTCAACCACTAAGCTATTTTCTCCTTCAGCG
CCACCTACGCCTCGACAGCTCATGCGAACGCTCAGCTCGCTCCGTCCCGA
CTTATACGACACGGAGGCTGCTGACAAGGCCACCAGCTCCTTATCTTTGG
GTAATCTCGCAAACTTGGCGAACAATGTACCCACGCGTGTTAGTGAGCCC
CCAATTCACGGAAGTGGGGAACTGAAGAGGGGGAACACGTGGTTTCATGA
CATTATGACTTCAATCAATACCTCTCTGCGTGATCCTAGAAAAGGAGGTG
CCATTGATCATGACGACCGCGATGAAGTAGAAGGTGATAGTGAGGGCGAG
GATGACGTTGCAGCAGATGAAGGAAATACCTCGAATGACCTCAATGCATC
TCGTTCCACTGCTCCTCGAGGAGCCCTTGGCCTTGGGGATATGATGAAAC
AGGGCAATTCGTCATTAGCGGATAATAATAGAAACAATTCGTCAGCCACT
GCTATGAAGGACGAGAAGCCCATCGCAGGCTCGTCTTCGATGACAGAAGG
GAACACAATGACTGCTACCAGGACCGCCTTAGACGACCGGTCGATCTCAA
AGCCAAGCTTTGAGGCAAGTTCAGAAGCAGCAACTCCACAAAAAATCGAC
TCCAAGGCCACGGAATCACAGGAGACAGGGCGAAGTACAAGTGAAGCATC
GAACGCGAACCTTCAAACGCCTCAGAAACAAACGACCCCGTCTAGCGCGT
CGAAAACTGTCGTGCCCACTCACCCAATTGCGAACCAAGACAAGCAGGTC
ATTGGCCTCACCCCAGAGCGTCAAGCCCCAGGGGAGGAGGTGAAGCAGCC
AAAGAAACGGGGCAGGAAACGGAAGAACCCTCATCTGACGGAGGAGCAAA
GAAGATTACAAAGGCAAGCGCAGAACCGAGAAAGCGCCAAACTGTCTCGA
ATTCGTCGAAAGCACATGACAATGGAATACGAAAAGAGAGTGAACACTCT
CGAAGGAGAGAATGAAAACCTCCGCGACACTATTAGCGGACTGGAAGATC
GTCTACAAATGCTGCAGAACTTGCTCACGATAACAGTGCAAAGGAGAAGC
ATCCCGCAAGTTCACCCGTCAATGATTCCGCAGTCCACCGCCGCTCTTGG
CCAAGGGCCGCAGAGCCGACTCAACACGGCAATTAATCCTCACGTGCCGA
TGGCCGCCCAACCGGGCATTAGCTCACAAGCAGGACTGGTTTCGCGGGCC
CTCAACGCACAGGCTCTATTAAGCAGTCAGAATGTAATGGCTCGTGCCGG
GGCAGCGTCACATGCTGGTATGATGCACGCACAGAACCAGCTCAACACAC
AACGTCCCCTCAACACAAACGACGCTTTGGTAGGTCGCACGCAAGCCCTT
TCAGGTTCAAGGCCTTTAGGACCAAATGCGCCGTCGCAATCAAACCCCTT
GACAAACTTTCGGTACAAAAACTTCTGA back to top
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