Ggra744.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra744.t1
Unique NameGgra744.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length637
Homology
BLAST of Ggra744.t1 vs. uniprot
Match: A0A2V3IIQ4 (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ4_9FLOR)

HSP 1 Score: 823 bits (2126), Expect = 1.170e-293
Identity = 472/655 (72.06%), Postives = 516/655 (78.78%), Query Frame = 0
Query:    1 MSPVPSDHSALPKQWAHEMALASSTLSSSQS-----PPRSPPHTLGGPAFDSQLDAFLHRFQHQILAARALKDDLDRLESHQHPH--YVAKKVAFKRHMEHIRSLFSTEGEQFVDSLERRNPNLTMAACGQNTIELAQGIERLESAVKEXXXXXXXXXXXXXXXXXXXXXXXXXXN---SLQP--HLAAITPLSSPDR------TAPPVSAVGHPLNNLSSEETLQLMQSDIQALKLELMRLHRVKVSAASASLPPPYAPGSVSPHADTPAFTSSTVSPDAKSVNAPPIPASILANNNVSVVRVTGRSIAPNYVSHLEQMKTRLQALEKKPLSRRAKSAARLGRTQTMSSMYEARAGDENQNPNVSAMVTPPRGVRR-QHRSVSTTSPVAASKTLLTPPPLQQLRSECSPRTTPSPVRLARERASGSPARLYFDAPEDLLSRPQSHAAARDIQRYSLKVSRRFGPNEMEMPAEPRAKSAVTVSPNRRRGAMQEGGKSVGNALTEVAAPLGAPSTIDTTGSGGRVVEEIEGDMWVRKGVVWKRWRRRYASIVSHPFFGKAICLFSYDSGGGVISTRSQIVVLANSLCKALREKLEIGGQERFMFVLRTQSKEYFFAAETDEIRRNWIKELKDAARKDAGRMLHTTKGRSMAFRRRT 636
            M+ +P    ALP+QWA EMALA+S  S   S     P  +P  TLGGP FD+QLD FL RFQ +I+ ARALKDDLD+L +       Y +KK  FK  M HIRSLFSTEGEQFV SLERRNP LTMAACG+NTIELAQGIERLE+AVKE               XXXXXXX        S Q    +  ITPLSSPDR      T  P SAVGH LNNL+S+ETLQLMQSDIQALKLELMRL R K  A SA LPPPY P S++  +D  +FT STVS + KS  APPIPASILANNNVSVVRVTGRS APNYVSHLEQMK+RL+ALEKKPLSRR KSAARLGRTQTM SMYE  + DEN NPNVSAMVTPPR  RR +HRSVS+ SP+A +K ++TPPP +  R E S  +TPSPVR   +++S SPARLYFDAPEDLL+RPQSHAAARDIQRYSLKVSRR GP E  + AEPRAKSAVTVSPNRRRG MQEGG SVGNA+++    LG PSTIDTTGSGGRVVEEIEGDMWVRKGVVWKRWRRRYASIVSH FFGK +CLFSYDSGGGVISTRSQIVVL NSLCKAL+EKLEIGGQERFMFVLRTQSKEYFFAAETDEIRRNWIKELKDAARKD GR+LH+ KGRSMAFRRRT
Sbjct:    1 MATLPRHKPALPQQWADEMALATSATSPLPSNLPPPPATTPAETLGGPLFDTQLDGFLDRFQQEIVVARALKDDLDQLTNRDDTDAVYHSKKQLFKLKMHHIRSLFSTEGEQFVKSLERRNPKLTMAACGENTIELAQGIERLETAVKEEETKRTASKPTATNAXXXXXXXPSAPRAPLSFQKASDITVITPLSSPDRETSTVVTPHPPSAVGHTLNNLNSDETLQLMQSDIQALKLELMRLQRTKAHATSA-LPPPYVPKSMTSPSDNQSFTLSTVSAEVKST-APPIPASILANNNVSVVRVTGRSTAPNYVSHLEQMKSRLEALEKKPLSRRTKSAARLGRTQTMGSMYEPVSADENHNPNVSAMVTPPRASRRMKHRSVSSASPLA-NKAVVTPPPTEHFRIERSSHSTPSPVRPGADKSSTSPARLYFDAPEDLLTRPQSHAAARDIQRYSLKVSRRLGPAEPVLIAEPRAKSAVTVSPNRRRGVMQEGGMSVGNAVSDAGGALGPPSTIDTTGSGGRVVEEIEGDMWVRKGVVWKRWRRRYASIVSHQFFGKVMCLFSYDSGGGVISTRSQIVVLHNSLCKALKEKLEIGGQERFMFVLRTQSKEYFFAAETDEIRRNWIKELKDAARKDTGRLLHSNKGRSMAFRRRT 652          
BLAST of Ggra744.t1 vs. uniprot
Match: A0A5J4YVX2 (PH domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVX2_PORPP)

HSP 1 Score: 65.9 bits (159), Expect = 2.020e-8
Identity = 32/104 (30.77%), Postives = 55/104 (52.88%), Query Frame = 0
Query:  511 GDMWVRKGVVWKRWRRRYASIVSHPFFGKAICLFSYDSGGGVISTRSQIVVLANSLCKALREKLEIGGQERFMFVLRTQSKEYFFAAETDEIRRNWIKELKDAA 614
            GD+++R+      W++R+A++V H +FG  + LF YD    +++  SQ++VL  S  K   +     G  R  F L+T  ++Y F+      R  WI+ L+  A
Sbjct:  125 GDLFIRQKFFTTMWKKRFATVVDHAYFGPVLFLFKYDKKNHIVAKTSQMIVLQESDSKLADDVRGSDGVYRCQFTLKTGKRKYVFSTSDALGREYWIELLRSYA 228          
The following BLAST results are available for this feature:
BLAST of Ggra744.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIQ41.170e-29372.06PH domain-containing protein n=1 Tax=Gracilariopsi... [more]
A0A5J4YVX22.020e-830.77PH domain-containing protein n=1 Tax=Porphyridium ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..35
NoneNo IPR availableCDDcd00821PHcoord: 509..610
e-value: 5.57815E-10
score: 54.4709
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 508..616
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 507..617
e-value: 5.6E-7
score: 39.2
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 508..614
e-value: 1.3E-6
score: 28.9
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 506..615
score: 10.9407
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 507..623
e-value: 1.1E-10
score: 43.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:51008..52918 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra744.t1Ggra744.t1Gracilaria gracilis GNS1m malemRNAtig00000164_pilon 51008..52918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra744.t1 ID=Ggra744.t1|Name=Ggra744.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=637bp
MSPVPSDHSALPKQWAHEMALASSTLSSSQSPPRSPPHTLGGPAFDSQLD
AFLHRFQHQILAARALKDDLDRLESHQHPHYVAKKVAFKRHMEHIRSLFS
TEGEQFVDSLERRNPNLTMAACGQNTIELAQGIERLESAVKEEETKRAAA
ASHPPSSSTLPPPPPPPPNSLQPHLAAITPLSSPDRTAPPVSAVGHPLNN
LSSEETLQLMQSDIQALKLELMRLHRVKVSAASASLPPPYAPGSVSPHAD
TPAFTSSTVSPDAKSVNAPPIPASILANNNVSVVRVTGRSIAPNYVSHLE
QMKTRLQALEKKPLSRRAKSAARLGRTQTMSSMYEARAGDENQNPNVSAM
VTPPRGVRRQHRSVSTTSPVAASKTLLTPPPLQQLRSECSPRTTPSPVRL
ARERASGSPARLYFDAPEDLLSRPQSHAAARDIQRYSLKVSRRFGPNEME
MPAEPRAKSAVTVSPNRRRGAMQEGGKSVGNALTEVAAPLGAPSTIDTTG
SGGRVVEEIEGDMWVRKGVVWKRWRRRYASIVSHPFFGKAICLFSYDSGG
GVISTRSQIVVLANSLCKALREKLEIGGQERFMFVLRTQSKEYFFAAETD
EIRRNWIKELKDAARKDAGRMLHTTKGRSMAFRRRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf