Ggra758.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra758.t1
Unique NameGgra758.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
BLAST of Ggra758.t1 vs. uniprot
Match: A0A2V3ISR2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR2_9FLOR)

HSP 1 Score: 459 bits (1181), Expect = 3.040e-155
Identity = 230/344 (66.86%), Postives = 272/344 (79.07%), Query Frame = 0
Query:    3 PSADEHQFYHYSQASQFVLRAQIDCRNPDTGEVFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQKDEQDPFGDAEFQRRERDSSQPPQVEEGVITNLQAVGQWHVDPDYHDNACPGVSILGAYKGFKQFGASWVPGKEKPSTETKRNVANSDVFNYTKFDLSSLTADKLRVWELKVVPLVNDEVHPRKNISLDEGDTFRLKYHFAEVTDLKGEHYSKFISGLARIYLR 346
            PS+ E QFYHYSQASQF+LRAQIDCRN  TGEVFDVKTRAVAKIRYDL NYLQY SHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRM+GALVAYHNTTELL LEYISLKEIESY+FGS+RWADVAFGTA+ LL+ +L TIT ++PLD+ D++LKVMLYTEWSKL+M+VFVQ L+K E D FG+ EF+RR+++  +     EG+ T LQA GQWH+D + H     GV+I+GA+   +  G  W+ G        +R  AN DVFN+ KFDLS + +  L+VWELKV PL+N+E  PR+NISL +GD FRL+Y   EV  L  EH  KF+SGLAR+YLR
Sbjct:  308 PSSHEQQFYHYSQASQFLLRAQIDCRNAATGEVFDVKTRAVAKIRYDLANYLQYTSHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMAGALVAYHNTTELLGLEYISLKEIESYIFGSERWADVAFGTAVHLLQEVLGTITKSMPLDDCDEKLKVMLYTEWSKLKMFVFVQRLKKGEVDAFGNKEFERRDQEG-EVTTPSEGLKTKLQACGQWHLDSELHKKGS-GVAIVGAHGRIRALGGEWIAGTGTGGQRKRRVAANRDVFNHLKFDLSGMRSGGLKVWELKVAPLMNEEEVPRRNISLGDGDQFRLRYQLREVEKLSSEHECKFVSGLARVYLR 649          
BLAST of Ggra758.t1 vs. uniprot
Match: R7QNH1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNH1_CHOCR)

HSP 1 Score: 371 bits (953), Expect = 9.460e-121
Identity = 191/342 (55.85%), Postives = 248/342 (72.51%), Query Frame = 0
Query:    4 SADEHQFYHYSQASQFVLRAQIDCRNPDTGEVFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQKDEQDPFGDAEFQRRERDSSQPPQVEEGVITNLQAVGQWHVDPDYHDNACPGVSILGAYKGFKQFGASWV-PGKEKPSTETKRNVANSDVFNYTKFDLSSLTADKLRVWELKVVPLVNDEVHPRKNISLDEGDTFRLKYHFAEVTDLKGEHYSKFISGLARIY 344
            S DE QFY+YS+ S+F+LRAQIDCRN +TGEVFDVKTRAVA IRYDL NY  +++H+LRFL+GK DSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNT+E+L LEY+ LKEI SYVFGS++W D+AFGT + LL+ +L+ IT  V   + ++ LKV++ TEWS+L MY+FVQ +   EQDPFG + F     + + P +       NL  +GQWH+D   H N   G+S+LG++    + G   + P KE  +    +    S+ ++Y+ +DL+SLT D+ RVWEL+V PLVND++ PR  I L E D FRLKY+  EV+D+K EH +KFI+ L RIY
Sbjct:  322 SPDE-QFYNYSKISKFLLRAQIDCRNENTGEVFDVKTRAVAPIRYDLQNYEAFSTHRLRFLRGKRDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTSEILGLEYLPLKEINSYVFGSEKWGDIAFGTTMHLLQDVLEKITAEVCQGDPNENLKVVMSTEWSRLHMYIFVQRVVDGEQDPFGPSVFLEMGENDTSPAENVTSKQKNLSGIGQWHMDSFLHAN-WRGLSMLGSHPSISKLGGHMLEPVKEDAALRLAKR-PRSETYDYSNYDLTSLTRDRFRVWELRVAPLVNDKMAPRNLICLGEEDRFRLKYNLKEVSDVKTEHVAKFITSLGRIY 660          
BLAST of Ggra758.t1 vs. uniprot
Match: A0A7S0ZFZ6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFZ6_9RHOD)

HSP 1 Score: 163 bits (413), Expect = 1.680e-41
Identity = 79/186 (42.47%), Postives = 123/186 (66.13%), Query Frame = 0
Query:    4 SAD-EHQFYHYSQASQFVLRAQIDCRNPDTGEVFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQKDEQDP 188
            SAD E Q Y+Y++   F LRAQ+D  +  TG +FD+KTRA  KIRY++ NY Q  S+ +  LKG+  S+EREFYD++RT F+KYA Q++IGRM+GA VA+HNT E+   EY+ ++EI++YVFG + W  +AF  A+ L    ++   +  P    +D +++++    +   ++ FVQ +  +E+DP
Sbjct:  389 SADAEPQSYNYTRMGDFFLRAQLDAMDKKTGLIFDLKTRATLKIRYNIENYKQGVSYLINQLKGENHSFEREFYDLIRTAFIKYAYQIKIGRMNGAFVAFHNTDEIFGFEYVPIEEIDTYVFGGEYWGSIAFDRAVQLYNIFMNHAMSLFPNRKPEDSVRIVICPLKASGSLHFFVQLIPANEEDP 574          
BLAST of Ggra758.t1 vs. uniprot
Match: A0A5J4YQN5 (mRNA degradation protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQN5_PORPP)

HSP 1 Score: 157 bits (397), Expect = 4.820e-39
Identity = 110/336 (32.74%), Postives = 166/336 (49.40%), Query Frame = 0
Query:    7 EHQFYHYSQASQFVLRAQIDCRNPDTGEVFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLR-----MYVFVQHLQKDEQDPFGDAEFQRRERDSSQPPQVEEGVITNLQAVGQWHVDPDY---HDNACPGVSILGAYKGFKQFGASWVPGKEKPS-----TETKRNVANSDVFNYTKFDLSSLTADKLRVWELKVVPLVNDEVHPRKNISLDEGDTFRLKYHFAEVTDLK 329
            E Q Y+Y+Q   F+ RAQIDC +   G+ FDVK+RAVA I++D+ +Y  ++ + +    G  +S++REF+D++R  F+KYA Q+R+GRM GA + YHNT   L  EY+ L E+E YVFG   W +VAF  ++ L  RILD   + VP     D ++VML     +       M V+V H    E D F                   E V+        W   P +    D   P    +   K       S +PGK+  S      + +++++  ++F + +  +++ T        +K   +VN  V   K  S+DEGDTF L Y F E  D+K
Sbjct:  471 EDQMYNYTQMGNFLFRAQIDCVDARNGKFFDVKSRAVAPIQWDVQDYEMHSHYMIDRATGDMNSFQREFFDLIRNGFMKYAFQIRLGRMDGAFIIYHNTKTCLGFEYVGLPEMEQYVFGGHWWGEVAFRYSMQLYNRILDHSLSLVPEAQLGDSVRVMLKPTRKQGASNENCMTVYVSHNVAGEPDLFST-----------------ENVLAWF-----WQYGPFFGLEQDTRSPTGEAMAPDK-------SMLPGKKPKSIPNHPVKLRKDMSAHELFAFPEGTIAAFT--------VKTRAIVNGRVRD-KAYSVDEGDTFNLYYSF-EPLDVK 767          
BLAST of Ggra758.t1 vs. uniprot
Match: A0A7S3EAR2 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EAR2_9RHOD)

HSP 1 Score: 152 bits (384), Expect = 1.010e-37
Identity = 73/140 (52.14%), Postives = 104/140 (74.29%), Query Frame = 0
Query:   10 FYHYSQASQFVLRAQIDCRNPDTG--EVFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDT 147
            F++YS+  + ++R+Q+D +   +   E+FD+K+RAVA  RY L  Y Q+A++K+++ +G T SYE EFYDMVR+VF+KYA QLR+G MSGA V +HNT E+L  EYI L+EIE YVFGS  WA+ AFG  +SL + I++T
Sbjct:  343 FHNYSRFEKLLIRSQVDGQRQGSRGIELFDIKSRAVAPTRYHLTRYKQFANYKIQYPRGVTRSYELEFYDMVRSVFMKYAFQLRLGGMSGAFVCFHNTREMLGFEYIRLQEIEQYVFGSSHWAEKAFGFTLSLYQVIMET 482          
BLAST of Ggra758.t1 vs. uniprot
Match: uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D)

HSP 1 Score: 149 bits (376), Expect = 3.270e-36
Identity = 81/184 (44.02%), Postives = 119/184 (64.67%), Query Frame = 0
Query:    4 SADEHQFYHYSQASQFVLRAQIDCRNPDTGEVFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITT---TVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQKD 184
            S +E + Y Y +   F++R+Q+DC +P  G VFD+KTRA+ +IR ++ +Y ++ + K++ +KG  +SYEREFYDMVR+VF+KY++Q RIG M G  +AYHNT EL   EY+ L EI+SYVFG+   A+  F   + LL  +LD IT     +PL  T   LKV  Y       + +FV+ +Q+D
Sbjct:  566 SMNEAEVYRYLRHGSFIVRSQLDCYHPKHG-VFDIKTRAINRIRINMEHYEKFVNSKIKLVKGINNSYEREFYDMVRSVFVKYSMQARIGDMDGMFLAYHNTRELFGFEYLKLSEIDSYVFGNSYMAERFFTLLLDLLRDVLDRITDRFPNIPLKITFRPLKVEPYF------IDIFVEPVQED 742          
BLAST of Ggra758.t1 vs. uniprot
Match: A0A6A5AV95 (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5AV95_NAEFO)

HSP 1 Score: 146 bits (369), Expect = 2.500e-35
Identity = 70/152 (46.05%), Postives = 102/152 (67.11%), Query Frame = 0
Query:    2 NPSADEHQFYHYSQASQFVLRAQIDCRNPDTGEVFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITTTVP 153
            N S D+   Y Y +   F++R+Q+DC +P  G VFD+KTRA+++IR ++ NY ++ + K++ +KG  +SYEREFYDMVR+VF+KY+ Q RIG M G  VAYHNT+EL   EY+ L EI+ +VFGS    +  F   + ++  +LD IT   P
Sbjct:  587 NISMDDADVYRYLRHGSFIIRSQLDCYDPQHG-VFDIKTRAISRIRTNMENYERFVNSKIKHVKGILNSYEREFYDMVRSVFVKYSFQARIGDMDGMFVAYHNTSELFGFEYMKLAEIDKFVFGSTYMGERFFNLLLDVMRDVLDRITDRFP 737          
BLAST of Ggra758.t1 vs. uniprot
Match: A0A3G2S593 (mRNA degradation protein pet127, mitochondrial n=2 Tax=Malassezia restricta TaxID=76775 RepID=A0A3G2S593_9BASI)

HSP 1 Score: 145 bits (365), Expect = 6.270e-35
Identity = 75/175 (42.86%), Postives = 109/175 (62.29%), Query Frame = 0
Query:    6 DEHQFYHYSQASQFVLRAQIDCRNPDTGE-VFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQ 179
            ++ + YHY+Q+ +F+LR+Q+DC +    +  FD+KTRAV  IR D  NY +   +++RF +G  +S+ERE++DMVR  FLKY  Q RIG M G  VAYHNT+E+   +YI L+E+   +FGS    D A+  +I LLERILD  T   P    ++ L + + T      MYV V+
Sbjct:  327 EQQEAYHYAQSPKFLLRSQLDCYDERLPKRTFDLKTRAVVSIRNDRANYAEGCGYQIRFARGLWESFEREYWDMVRAAFLKYNFQARIGHMDGIFVAYHNTSEIFGFQYIDLEEMNLRLFGSNEMGDKAYHMSIGLLERILDVATENFP----NETLSITMETRPGTGNMYVIVE 497          
BLAST of Ggra758.t1 vs. uniprot
Match: A0A6B2KZ11 (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KZ11_9EUKA)

HSP 1 Score: 144 bits (364), Expect = 8.730e-35
Identity = 75/181 (41.44%), Postives = 117/181 (64.64%), Query Frame = 0
Query:    2 NPSADEHQFYHYSQASQFVLRAQIDCRNPDTGE-VFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITTTVPLDNTDDRLKVMLYTEWSKLRMYVFVQHL 181
            NP A E   Y+YS+    ++RAQ+DC NP+  +  FD+KTRA+  IR ++ +Y +Y S  L  L G   S+ERE+YDM+R+ FLKY +Q+++GRM G  VAYHNT +L   EYI LKE+E  +F +++ ADV+F    +LL ++LD +T+       ++ LK+++ T     +M +FV+ +
Sbjct:  187 NPPAKE--AYNYSKFGPILIRAQLDCENPELKKRYFDIKTRALHSIRINMSDYQKYLSTTLENLTGLHGSFEREYYDMIRSAFLKYIIQVKVGRMDGIFVAYHNTLQLFGFEYIPLKEMEKAIFQTEQMADVSFKVMTTLLGKLLDYLTSRFK----NEVLKMVMQTSMDSQKMKIFVERI 361          
BLAST of Ggra758.t1 vs. uniprot
Match: A0A0M9VQI1 (Uncharacterized protein n=1 Tax=Malassezia pachydermatis TaxID=77020 RepID=A0A0M9VQI1_9BASI)

HSP 1 Score: 144 bits (364), Expect = 9.970e-35
Identity = 67/144 (46.53%), Postives = 100/144 (69.44%), Query Frame = 0
Query:   11 YHYSQASQFVLRAQIDCRNPDT-GEVFDVKTRAVAKIRYDLPNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITTTVP 153
            YHY++  +F+LR+Q+DC++P    + FD+KTRAV  IR D  NY + + ++++  +G  +S+ERE++DMVR  FLKY  Q+RIG M G  VAYHNT ++   +YISL+E+   +FGS    D+A+  ++ LLERILDT T  +P
Sbjct:  351 YHYAKTDRFLLRSQLDCQDPRLPNKTFDLKTRAVVSIRNDRANYAEGSGYQIQHARGLWESFEREYWDMVRAAFLKYNFQVRIGHMDGIFVAYHNTAQIFGFQYISLEEMNMRLFGSNEMGDMAYHMSLGLLERILDTATECIP 494          
The following BLAST results are available for this feature:
BLAST of Ggra758.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISR23.040e-15566.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QNH19.460e-12155.85Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZFZ61.680e-4142.47Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YQN54.820e-3932.74mRNA degradation protein n=1 Tax=Porphyridium purp... [more]
A0A7S3EAR21.010e-3752.14Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D3.270e-3644.02uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A6A5AV952.500e-3546.05Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
A0A3G2S5936.270e-3542.86mRNA degradation protein pet127, mitochondrial n=2... [more]
A0A6B2KZ118.730e-3541.44Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A0M9VQI19.970e-3546.53Uncharacterized protein n=1 Tax=Malassezia pachyde... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013943Mitochondrial protein Pet127PFAMPF08634Pet127coord: 6..146
e-value: 6.9E-49
score: 166.7
IPR013943Mitochondrial protein Pet127PANTHERPTHR31014UNCHARACTERIZEDcoord: 6..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:280021..281061 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra758.t1Ggra758.t1Gracilaria gracilis GNS1m malemRNAtig00000164_pilon 280021..281061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra758.t1 ID=Ggra758.t1|Name=Ggra758.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MNPSADEHQFYHYSQASQFVLRAQIDCRNPDTGEVFDVKTRAVAKIRYDL
PNYLQYASHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMSGALV
AYHNTTELLALEYISLKEIESYVFGSQRWADVAFGTAISLLERILDTITT
TVPLDNTDDRLKVMLYTEWSKLRMYVFVQHLQKDEQDPFGDAEFQRRERD
SSQPPQVEEGVITNLQAVGQWHVDPDYHDNACPGVSILGAYKGFKQFGAS
WVPGKEKPSTETKRNVANSDVFNYTKFDLSSLTADKLRVWELKVVPLVND
EVHPRKNISLDEGDTFRLKYHFAEVTDLKGEHYSKFISGLARIYLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013943Pet127