Ggra761.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra761.t1
Unique NameGgra761.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length479
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:299410..300846 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra761Ggra761Gracilaria gracilis GNS1m malegenetig00000164_pilon 299410..300846 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra761.t1.stop1Ggra761.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000164_pilon 299410..299412 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra761.t1.CDS1Ggra761.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000164_pilon 299410..300846 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra761.t1.exon1Ggra761.t1.exon1Gracilaria gracilis GNS1m maleexontig00000164_pilon 299410..300846 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra761.t1.start1Ggra761.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000164_pilon 300844..300846 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra761.t1Ggra761.t1Gracilaria gracilis GNS1m malepolypeptidetig00000164_pilon 299410..300846 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra761.t1 ID=Ggra761.t1|Name=Ggra761.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=479bp
MPVLPALQSSLPCAVTRESFQTFDEPGLSWESILAFTTILFAGMQATLMM
ESAAPCRASYDKIRIYLLLEVLEFMVALIAEAFAFFDLRSAFQVRLQWLS
WLPYCLLVYGIVEVFSEVFYAIYLAYRSRVQWIPFSSVDQDVSIPTSIST
IIGLLIPAGLSLVLVGWRQGWWMRTNSPLPTEEGIAFAKGEISLRVGVMI
FCIGFALFCTVFSVILCYFFRKELSDLAHWCNIIRRTDGRQIGRLDEMLM
DFAGNQDHNDTNGGQEIDTQSTEGTTKSCTSIIGRILWPSNTSFPENTTE
EETEVKDQWELLLLLQEKAGVDEQKGLKTKGMLSRLRAIGSRAYSCVRDC
GQPRQKTEGAGEANNETHGNLDSYFKKIPLNVRNAILGKHKARVTENEEA
AVLQQFLLVARHLSILPLLICTVVAIGRLWNRADLETLRTLKKLADVVIV
ISVVEIATNMKHMIWGIEGDTEPDTLNI*
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spliced messenger RNA

>Ggra761.t1 ID=Ggra761.t1|Name=Ggra761.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1437bp|location=Sequence derived from alignment at tig00000164_pilon:299410..300846- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCGTTCTCCCCGCACTGCAGTCCAGTTTGCCATGTGCTGTAACTCG
GGAATCGTTCCAAACGTTCGACGAGCCTGGTTTGAGTTGGGAGTCCATTC
TTGCCTTCACAACCATTCTCTTTGCCGGCATGCAAGCCACGCTCATGATG
GAATCTGCTGCACCCTGTCGGGCGTCTTATGACAAGATAAGAATATACCT
TCTTCTTGAAGTCTTGGAGTTTATGGTTGCACTTATCGCAGAGGCCTTCG
CTTTCTTTGATTTACGATCTGCTTTTCAAGTCCGTCTTCAATGGCTTTCT
TGGTTGCCCTATTGTTTGCTCGTTTATGGTATTGTTGAGGTTTTTTCCGA
AGTGTTCTATGCGATATATTTGGCATATCGCTCACGTGTGCAATGGATCC
CATTTTCTAGTGTTGACCAAGATGTGAGCATTCCTACTTCGATAAGCACG
ATAATTGGTCTCTTAATTCCAGCGGGACTTTCACTCGTACTTGTTGGATG
GAGACAAGGATGGTGGATGAGAACTAATTCCCCTTTACCAACGGAAGAAG
GCATTGCTTTTGCAAAGGGTGAAATATCCCTTAGAGTCGGAGTGATGATC
TTCTGTATTGGTTTTGCTCTTTTCTGTACAGTTTTCTCGGTGATACTTTG
CTATTTTTTCAGAAAGGAACTTTCTGATCTTGCTCATTGGTGTAATATTA
TCAGGAGAACCGACGGGAGACAAATTGGACGGCTTGACGAGATGCTGATG
GATTTTGCCGGAAATCAGGACCACAATGACACTAATGGAGGCCAAGAGAT
TGACACGCAGAGTACTGAGGGAACAACTAAAAGCTGTACATCTATCATAG
GACGCATTCTCTGGCCAAGCAATACAAGTTTTCCTGAGAACACTACTGAA
GAAGAAACGGAGGTTAAAGATCAGTGGGAACTTCTTCTTCTCCTTCAGGA
GAAAGCTGGTGTCGATGAACAGAAAGGTTTGAAAACTAAGGGTATGTTGA
GCAGATTGAGAGCCATTGGGTCGCGCGCATACAGCTGTGTAAGGGACTGC
GGTCAACCACGCCAGAAGACTGAAGGCGCAGGCGAGGCGAACAACGAGAC
CCATGGTAATTTGGATTCGTACTTCAAAAAAATTCCGCTTAATGTACGTA
ATGCTATTTTGGGTAAACACAAGGCAAGAGTCACTGAAAATGAGGAGGCG
GCAGTATTACAGCAATTTTTGCTCGTCGCCAGGCATTTGTCAATTCTACC
ACTCTTGATATGTACAGTTGTGGCTATTGGACGGTTGTGGAATAGAGCGG
ATCTTGAGACTCTTCGTACACTCAAGAAATTGGCAGATGTTGTCATCGTC
ATATCAGTGGTCGAAATTGCCACGAACATGAAACATATGATCTGGGGCAT
AGAAGGTGATACAGAGCCCGATACTTTGAACATTTGA
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protein sequence of Ggra761.t1

>Ggra761.t1 ID=Ggra761.t1|Name=Ggra761.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=479bp
MPVLPALQSSLPCAVTRESFQTFDEPGLSWESILAFTTILFAGMQATLMM
ESAAPCRASYDKIRIYLLLEVLEFMVALIAEAFAFFDLRSAFQVRLQWLS
WLPYCLLVYGIVEVFSEVFYAIYLAYRSRVQWIPFSSVDQDVSIPTSIST
IIGLLIPAGLSLVLVGWRQGWWMRTNSPLPTEEGIAFAKGEISLRVGVMI
FCIGFALFCTVFSVILCYFFRKELSDLAHWCNIIRRTDGRQIGRLDEMLM
DFAGNQDHNDTNGGQEIDTQSTEGTTKSCTSIIGRILWPSNTSFPENTTE
EETEVKDQWELLLLLQEKAGVDEQKGLKTKGMLSRLRAIGSRAYSCVRDC
GQPRQKTEGAGEANNETHGNLDSYFKKIPLNVRNAILGKHKARVTENEEA
AVLQQFLLVARHLSILPLLICTVVAIGRLWNRADLETLRTLKKLADVVIV
ISVVEIATNMKHMIWGIEGDTEPDTLNI*
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mRNA from alignment at tig00000164_pilon:299410..300846-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra761.t1 ID=Ggra761.t1|Name=Ggra761.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1437bp|location=Sequence derived from alignment at tig00000164_pilon:299410..300846- (Gracilaria gracilis GNS1m male)
ATGCCCGTTCTCCCCGCACTGCAGTCCAGTTTGCCATGTGCTGTAACTCG
GGAATCGTTCCAAACGTTCGACGAGCCTGGTTTGAGTTGGGAGTCCATTC
TTGCCTTCACAACCATTCTCTTTGCCGGCATGCAAGCCACGCTCATGATG
GAATCTGCTGCACCCTGTCGGGCGTCTTATGACAAGATAAGAATATACCT
TCTTCTTGAAGTCTTGGAGTTTATGGTTGCACTTATCGCAGAGGCCTTCG
CTTTCTTTGATTTACGATCTGCTTTTCAAGTCCGTCTTCAATGGCTTTCT
TGGTTGCCCTATTGTTTGCTCGTTTATGGTATTGTTGAGGTTTTTTCCGA
AGTGTTCTATGCGATATATTTGGCATATCGCTCACGTGTGCAATGGATCC
CATTTTCTAGTGTTGACCAAGATGTGAGCATTCCTACTTCGATAAGCACG
ATAATTGGTCTCTTAATTCCAGCGGGACTTTCACTCGTACTTGTTGGATG
GAGACAAGGATGGTGGATGAGAACTAATTCCCCTTTACCAACGGAAGAAG
GCATTGCTTTTGCAAAGGGTGAAATATCCCTTAGAGTCGGAGTGATGATC
TTCTGTATTGGTTTTGCTCTTTTCTGTACAGTTTTCTCGGTGATACTTTG
CTATTTTTTCAGAAAGGAACTTTCTGATCTTGCTCATTGGTGTAATATTA
TCAGGAGAACCGACGGGAGACAAATTGGACGGCTTGACGAGATGCTGATG
GATTTTGCCGGAAATCAGGACCACAATGACACTAATGGAGGCCAAGAGAT
TGACACGCAGAGTACTGAGGGAACAACTAAAAGCTGTACATCTATCATAG
GACGCATTCTCTGGCCAAGCAATACAAGTTTTCCTGAGAACACTACTGAA
GAAGAAACGGAGGTTAAAGATCAGTGGGAACTTCTTCTTCTCCTTCAGGA
GAAAGCTGGTGTCGATGAACAGAAAGGTTTGAAAACTAAGGGTATGTTGA
GCAGATTGAGAGCCATTGGGTCGCGCGCATACAGCTGTGTAAGGGACTGC
GGTCAACCACGCCAGAAGACTGAAGGCGCAGGCGAGGCGAACAACGAGAC
CCATGGTAATTTGGATTCGTACTTCAAAAAAATTCCGCTTAATGTACGTA
ATGCTATTTTGGGTAAACACAAGGCAAGAGTCACTGAAAATGAGGAGGCG
GCAGTATTACAGCAATTTTTGCTCGTCGCCAGGCATTTGTCAATTCTACC
ACTCTTGATATGTACAGTTGTGGCTATTGGACGGTTGTGGAATAGAGCGG
ATCTTGAGACTCTTCGTACACTCAAGAAATTGGCAGATGTTGTCATCGTC
ATATCAGTGGTCGAAATTGCCACGAACATGAAACATATGATCTGGGGCAT
AGAAGGTGATACAGAGCCCGATACTTTGAACATTTGA
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Coding sequence (CDS) from alignment at tig00000164_pilon:299410..300846-

>Ggra761.t1 ID=Ggra761.t1|Name=Ggra761.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1437bp|location=Sequence derived from alignment at tig00000164_pilon:299410..300846- (Gracilaria gracilis GNS1m male)
ATGCCCGTTCTCCCCGCACTGCAGTCCAGTTTGCCATGTGCTGTAACTCG
GGAATCGTTCCAAACGTTCGACGAGCCTGGTTTGAGTTGGGAGTCCATTC
TTGCCTTCACAACCATTCTCTTTGCCGGCATGCAAGCCACGCTCATGATG
GAATCTGCTGCACCCTGTCGGGCGTCTTATGACAAGATAAGAATATACCT
TCTTCTTGAAGTCTTGGAGTTTATGGTTGCACTTATCGCAGAGGCCTTCG
CTTTCTTTGATTTACGATCTGCTTTTCAAGTCCGTCTTCAATGGCTTTCT
TGGTTGCCCTATTGTTTGCTCGTTTATGGTATTGTTGAGGTTTTTTCCGA
AGTGTTCTATGCGATATATTTGGCATATCGCTCACGTGTGCAATGGATCC
CATTTTCTAGTGTTGACCAAGATGTGAGCATTCCTACTTCGATAAGCACG
ATAATTGGTCTCTTAATTCCAGCGGGACTTTCACTCGTACTTGTTGGATG
GAGACAAGGATGGTGGATGAGAACTAATTCCCCTTTACCAACGGAAGAAG
GCATTGCTTTTGCAAAGGGTGAAATATCCCTTAGAGTCGGAGTGATGATC
TTCTGTATTGGTTTTGCTCTTTTCTGTACAGTTTTCTCGGTGATACTTTG
CTATTTTTTCAGAAAGGAACTTTCTGATCTTGCTCATTGGTGTAATATTA
TCAGGAGAACCGACGGGAGACAAATTGGACGGCTTGACGAGATGCTGATG
GATTTTGCCGGAAATCAGGACCACAATGACACTAATGGAGGCCAAGAGAT
TGACACGCAGAGTACTGAGGGAACAACTAAAAGCTGTACATCTATCATAG
GACGCATTCTCTGGCCAAGCAATACAAGTTTTCCTGAGAACACTACTGAA
GAAGAAACGGAGGTTAAAGATCAGTGGGAACTTCTTCTTCTCCTTCAGGA
GAAAGCTGGTGTCGATGAACAGAAAGGTTTGAAAACTAAGGGTATGTTGA
GCAGATTGAGAGCCATTGGGTCGCGCGCATACAGCTGTGTAAGGGACTGC
GGTCAACCACGCCAGAAGACTGAAGGCGCAGGCGAGGCGAACAACGAGAC
CCATGGTAATTTGGATTCGTACTTCAAAAAAATTCCGCTTAATGTACGTA
ATGCTATTTTGGGTAAACACAAGGCAAGAGTCACTGAAAATGAGGAGGCG
GCAGTATTACAGCAATTTTTGCTCGTCGCCAGGCATTTGTCAATTCTACC
ACTCTTGATATGTACAGTTGTGGCTATTGGACGGTTGTGGAATAGAGCGG
ATCTTGAGACTCTTCGTACACTCAAGAAATTGGCAGATGTTGTCATCGTC
ATATCAGTGGTCGAAATTGCCACGAACATGAAACATATGATCTGGGGCAT
AGAAGGTGATACAGAGCCCGATACTTTGAACATTTGA
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