Ggra761.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra761.t1
Unique NameGgra761.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length479
Homology
BLAST of Ggra761.t1 vs. uniprot
Match: A0A2V3IM96 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM96_9FLOR)

HSP 1 Score: 337 bits (864), Expect = 1.050e-107
Identity = 204/493 (41.38%), Postives = 286/493 (58.01%), Query Frame = 0
Query:    7 LQSSLPCAVTRESFQTFDEPGLSWESILAFTTILFAGMQATLMMESAAPCRASYDKIRIYLLLEVLEFMVALIAEAFAFFDLRSAFQVRLQWLSWLPYCLLVYGIVEVFSEVFYAIYLAYRSRVQWIPFSSVDQDVSIPTSISTIIGLLIPAGLSLVLVGWRQGWWMRTNSPLPTEEGIAFAKGEISLRVGVMIFCIGFALFCTVFSVILCYFFRKELSDLAHWCNIIRRTDGRQIGRLDEMLMDFAGNQDHNDTNGGQEIDTQSTEGTTK-----SCT--SIIGRILWPSNTSF--PENTTEEETEVKDQWELLLLLQEKAGVDEQKGLKTKGMLSRLRAIGSRAYSCVRDCGQ------------PRQKTEGAGEANNETHGNLDSYFKKIPLNVRNAILGKHKARVTENEEAAVLQQFLLVARHLSILPLLICTVVAIGRLWNRADLETLRTLKKLADVVIVISVVEIATNMKHMIWGIEGDTEPDTLNI 478
            ++ +    V+RES Q  D+ GL W+++LAFTT+LF+GMQ  L+MESA PCR SY K+ ++L+LE LEF+  + AE  +F +LRSAF  RLQWLSW+PYCL++YGI E+  +V Y +YL + SRV+WIPFSSV +     + ++ +I L++ A LS  L+GW+QGWWMRT+S +  E  I+    E+ L V +M  C+ +AL    F+  LC+F+R+ +SD+ ++   I  T+  +  R  ++L      ++ N+         ++TE  T+     SC        ILWP  +S+  PE   EE   V++ W LL LL++  G+D +          R+   G    +   D  +              Q T G   A      ++DSY +  PLNVRNAIL      V  N +AA L   LLV ++ S LPLLIC V A+GRLWNR D ET +TLK LAD VIVISVVEI  N+KHMIWGI    E DT N+
Sbjct:    1 MEYAFSSTVSRESSQMLDKAGLGWQTVLAFTTMLFSGMQGVLVMESAEPCRISYSKLVVFLVLEFLEFLATIFAEVASFLELRSAFTTRLQWLSWMPYCLVIYGIFELLIDVVYTMYLTHCSRVRWIPFSSVARHEKGRSRLAKLIILVVSAVLSFFLIGWQQGWWMRTSSRVSREAAISSTIDEVFLSVWMMSVCVTWALLLLTFAG-LCFFYRERISDVLYYVGAIDMTNEEKRKRAFKLLCAPRSERERNE---------RTTEPATRAWCIQSCNIFKTCKEILWPYKSSYCVPE---EETASVRNLWRLLQLLKQN-GIDMEPYPADSTKYIRISLNGDERSANESDAEELPAEQGIGSDVGGLQATAGMENALASIDNSVDSYIRSAPLNVRNAILVPPNKEVNGNRKAAALAVLLLVVKYGSFLPLLICVVAAVGRLWNRVDFETFQTLKSLADTVIVISVVEIGINLKHMIWGIRSCDEHDTFNV 479          
BLAST of Ggra761.t1 vs. uniprot
Match: A0A2V3J498 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J498_9FLOR)

HSP 1 Score: 244 bits (622), Expect = 3.900e-71
Identity = 175/501 (34.93%), Postives = 265/501 (52.89%), Query Frame = 0
Query:    9 SSLPCAVTRESFQTFDEPGLSWESILAFTTILFAGMQATLMMESAAPCRASYDKIRIYLLLEVLEFMVALIAEAFAFFDLRSAFQVRLQWLSWLPYCLLVYGIVEVFSEVFYAIYLAYRSRVQWIPFSSVDQDVSIPTSISTIIGLLIPAGLSLVLVGWRQGWWMRTNSPLPTEEGIAFAKGEISLRVGVMIFCIGFALFC---TVFSVIL--CYFFRKELSDLAHWCNIIRRT-DGRQIGRLDEMLMDFAGNQDHNDTNGGQEIDT------------------QSTEGTTKS------CTSIIG---RILWPSNTSFPENTTE--------EETEVKDQWELLLLLQEKAGVDEQKGLKTKGMLSRLRAIGSRAYSCVRDCGQPRQKTEGAGEANNETHGNLDSYFKKIPLNVRNAILGKHKARVTEN--EEAAVLQQFLLVARHLSILPLLICTVVAIGRLWNRADLETLRTLKKLADVVIVISVVEIATNMKHMIWG 466
            ++L    +  S    ++PGLSW++IL+F+ ILFAGMQ TL MESA PCR S+ K+ I L LE+LE +V L AE   F  L+++F+ RLQWL+WLP CLL YGI+E+  +VF+ +  AY SRV W+PFSS+       +S + +  +     +SLVLVGWRQ WW R+   +PT   I  A+ E+SLRVGVM+FC+ +AL     T  S+++    +F+++L       N++     G +I R+  M  +   + +    +G QE                     ++ EG T        C  +I    RIL+P  +   ++  +        +  E+KDQ  LLLLLQ                  R R +G    +  +D            +       +   + ++ PL++ NAI+G HK    E+  E +  +   LL A H+S+LPLL+  +VA+ RLW+  D ETL  L++L+D VI+IS+VEIA NMK+++ G
Sbjct:    6 TALQDLASNSSSAPLEQPGLSWQTILSFSAILFAGMQGTLTMESADPCRMSFVKVGILLFLELLEVIVILTAEITTFLQLQASFRTRLQWLNWLPACLLAYGILELLIDVFFLLRQAYLSRVYWLPFSSIHGKPFSLSSYAVLFYVCFTTAISLVLVGWRQRWWWRSQL-VPTTIAINAAREEMSLRVGVMVFCMVWALLLIAGTAISLLVFRTAYFKQQLEGAVP--NLVELVPQGSRIPRILGMRANEDSDIEGRSESGSQENSIPRLLLRCSEFFTIYYNTLRAPEGNTSDSLVNLHCWDVIKHGCRILYPHRSKRSDSDVDLTSVFPNSQSKELKDQCVLLLLLQ------------------RYRELG---ITIAKDLVNEDSTASTVFKVTVNRRIDSGEWLREAPLHIGNAIVGDHKKIALEHGAETSTYVHFALLAAEHISLLPLLVTVMVAVKRLWDSVDQETLNALRELSDAVIIISLVEIAHNMKNLLSG 482          
The following BLAST results are available for this feature:
BLAST of Ggra761.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IM961.050e-10741.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4983.900e-7134.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..167
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..412
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 413..430
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 431..478
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..53
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 197..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:299410..300846 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra761.t1Ggra761.t1Gracilaria gracilis GNS1m malemRNAtig00000164_pilon 299410..300846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra761.t1 ID=Ggra761.t1|Name=Ggra761.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=479bp
MPVLPALQSSLPCAVTRESFQTFDEPGLSWESILAFTTILFAGMQATLMM
ESAAPCRASYDKIRIYLLLEVLEFMVALIAEAFAFFDLRSAFQVRLQWLS
WLPYCLLVYGIVEVFSEVFYAIYLAYRSRVQWIPFSSVDQDVSIPTSIST
IIGLLIPAGLSLVLVGWRQGWWMRTNSPLPTEEGIAFAKGEISLRVGVMI
FCIGFALFCTVFSVILCYFFRKELSDLAHWCNIIRRTDGRQIGRLDEMLM
DFAGNQDHNDTNGGQEIDTQSTEGTTKSCTSIIGRILWPSNTSFPENTTE
EETEVKDQWELLLLLQEKAGVDEQKGLKTKGMLSRLRAIGSRAYSCVRDC
GQPRQKTEGAGEANNETHGNLDSYFKKIPLNVRNAILGKHKARVTENEEA
AVLQQFLLVARHLSILPLLICTVVAIGRLWNRADLETLRTLKKLADVVIV
ISVVEIATNMKHMIWGIEGDTEPDTLNI*
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