Ggra9816.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9816.t1
Unique Name	Ggra9816.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	371

Homology

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BLAST of Ggra9816.t1 vs. uniprot
Match: A0A2V3II95 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II95_9FLOR)

HSP 1 Score: 271 bits (692), Expect = 4.060e-83
Identity = 153/330 (46.36%), Postives = 203/330 (61.52%), Query Frame = 0

Query:    1 MGLSLHEIERGIGLDLLRRPIITAFLNACLLRIFTDLFLYTGDDDXXXXXXXXXXXXIDDQEGARMRSFAKDAWQRKCVDSGLSEKGAALAVVLLAQLIRVLGLAETLAWTFIALLFSTLKLPRVYAFEKLLLDLAVILYRPSVRYVNKRIRFECGGQHGVPRLHASRHGFGVFAVTIITSVESLSRDSSALLHLLRYMNYTTVTYWREDALVMVGGNRHVERALCGACRERTVIDLGWHKDVFECTNFRVEAVFAPEGGAAATAEAVSVPVEAEGKAEXXXXXXAEVGTAADASSVRLVGKRAVAVELSAPFGGESVELAVKSMGQFAA 330
            M L LHEIERGIG+DLLRRP++ AFLNA LL++F D FL+                  DD+E  +++  A  A   K   S L+EK AA ++  LA L+ ++G AE++ W  IA++F  LKLPRVY  EKLLLDL V+  +PSVRYV K IRF+C     +PRL  +R GFGVF +TI++SVES++RD++ALLH+LRYMNY T  YW +D+++++G NR++ERALC    E  VIDLGWHKDV E TN +VEAVF  E                                    S ++ VG+RAV VE++A F   ++E  VKSM Q+AA
Sbjct:    1 MALRLHEIERGIGIDLLRRPVLVAFLNAFLLQLFADAFLHH-----------------DDEEEEKVKYEAPKAGWAK---SPLTEKLAATSIFFLAHLLMLVGFAESVGWALIAIVFKVLKLPRVYVLEKLLLDLRVMFLKPSVRYVKKTIRFQCRPGQKIPRLQTTRRGFGVFVITIVSSVESITRDTAALLHMLRYMNYPTYAYWTDDSVLLIGINRNIERALCNLASEPAVIDLGWHKDVIESTNLKVEAVFTKENLRRVD------------------------------SGIQSVGRRAVVVEIAAEFTTLNLETLVKSMSQYAA 280

The following BLAST results are available for this feature:

BLAST of Ggra9816.t1 vs. uniprot

BLAST of Ggra9816.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3II95	4.060e-83	46.36	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 41..88
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 118..370
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 89..117
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..40
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000160_pilon	contig	tig00000160_pilon:12050..13615 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9816.t1	Ggra9816.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000160_pilon 12050..13615 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9816.t1 ID=Ggra9816.t1|Name=Ggra9816.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=371bp
MGLSLHEIERGIGLDLLRRPIITAFLNACLLRIFTDLFLYTGDDDEDDDD
DDDDDDDIDDQEGARMRSFAKDAWQRKCVDSGLSEKGAALAVVLLAQLIR
VLGLAETLAWTFIALLFSTLKLPRVYAFEKLLLDLAVILYRPSVRYVNKR
IRFECGGQHGVPRLHASRHGFGVFAVTIITSVESLSRDSSALLHLLRYMN
YTTVTYWREDALVMVGGNRHVERALCGACRERTVIDLGWHKDVFECTNFR
VEAVFAPEGGAAATAEAVSVPVEAEGKAETEGKAAAEVGTAADASSVRLV
GKRAVAVELSAPFGGESVELAVKSMGQFAARLVLGAAESDGVATVLAVER
VRNLKRLPPSGAAAVVRRLG*