Ggra178.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra178.t1
Unique NameGgra178.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length805
Homology
BLAST of Ggra178.t1 vs. uniprot
Match: A0A2V3IVV5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVV5_9FLOR)

HSP 1 Score: 464 bits (1194), Expect = 7.540e-152
Identity = 244/472 (51.69%), Postives = 319/472 (67.58%), Query Frame = 0
Query:  293 HQFSTADHALQRQVNNNIGPSGTLTILHRLRDAIGTAVQTWGFGPGRKHDIRHTRLNSPLPFVYRDTVSALSRSECTESSSDSGC----ELLTKGFGTVGVVRYSFSAERENIVGTSTQVQTACRCIGPDCDKALLMRPVNITERRQDGNVYTTAKKSCIYQFYEGDFTDCHAETLRMQQKASA-AETRAGYFTFEVDASQHHQGIWKAVGHRGWDYGCVKDDFYSLPTVNLSA-PMANISSDIHQYPPSAREGIPSLNQSDDCRPPPNVRYFRDADQREGEECAAAFQFAIAGASFLGTQMDEVAIGKDQRTYIRELPTLLVFWEIMILICAATLGLYFAISAFLRFRKKGEWSYSRMLKLLAVQLMSLVFEGLPLYFALSLESVASRWTGRFAYMGATVALGRDVLQPQAVAHGNVLVLTAVVGESSFASTHLVTVAMFSAVVNLAAVVIVALVLFAFFSNRARQTEHAE 758
            H  +  D  L R V + IG  GTLT+L RLRDAIGTA Q WGFGP   H + H+  + PL  VYR+ +SA       E  +  G     EL+T+GFGTVGVVRY F + R N+ G STQV TACRC G DC +A+L+RPVNITE   DG +  T +KSCIYQFY+G FTDCH+ET++ Q K    +   + Y+ FEV+ASQH +G WKA+G RGWDY C +DDF SLP VN+S   MANISS+I  YP    EG   ++    CRPPP V+YFRD  + +G +CA  ++F+IA  SF  +QMD+VAIG    +Y  ELP LL FWE+++L CAA+LGLYFA ++  ++RKKG WS  R +KL+AV LMS+ FE LPL+FAL  E+ A +W GRFAY+ AT+A+G+D +Q Q  A+GN++VLTA++GES +  T LVTV  F+AVV++  VVI+  V+F     RA + +  E
Sbjct:   42 HISADKDVPLLRHVKS-IGLEGTLTLLERLRDAIGTATQAWGFGPSLMHSVHHSLEHGPLRVVYRNAISA-------ELGALKGAGRLKELMTRGFGTVGVVRYLFKSNRMNVAGESTQVMTACRCTGHDCTEAILLRPVNITETGPDGRIRLTGRKSCIYQFYKGTFTDCHSETIKTQDKRKGQSRHHSDYWVFEVNASQHGEGSWKALGFRGWDYACHEDDFKSLPRVNVSGIGMANISSEIEDYPLRKDEGPVPMDSRSGCRPPPGVQYFRDEREEDGAQCAETYEFSIAAGSFRASQMDQVAIGMKADSYTSELPALLRFWEVLVLSCAASLGLYFAHASLAKYRKKGFWSRLRTVKLVAVILMSVAFEALPLHFALGFEADAKKWAGRFAYLAATIAVGKDQVQVQESAYGNIVVLTALLGESQYIETQLVTVVAFTAVVDIGGVVILLAVVFVHCRARASRGKMGE 505          
BLAST of Ggra178.t1 vs. uniprot
Match: A0A2V3IGG8 (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGG8_9FLOR)

HSP 1 Score: 264 bits (674), Expect = 7.240e-79
Identity = 124/222 (55.86%), Postives = 169/222 (76.13%), Query Frame = 0
Query:   66 SLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLMRGAGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTHMPAIKTDLNMKSFLGRGTGEEFQLAFTQGVVVVQPFEETYV 287
            SL   V+++ ++    SLFELE  KLLRI L  +   +AWIK+G +IAR G +  SRQS+REQG GKI+KKA++GEGM L+KC+G G+ +CAD+ K++S+V L ++ L+LNGNDVLALS SL YD  LM+GA + +G +FN++++G+G++AFT  G V  L+A+PENPVY+DPN+TVAWTH P+ K  L+MKS +GRG+GEE Q  F  GVV+VQPFEE  V
Sbjct:   24 SLSSLVARTRIQPSSQSLFELERSKLLRINLKPKKDNYAWIKLGCIIARQGDLNTSRQSMREQGLGKIVKKAVSGEGMNLIKCKGDGIVFCADDDKLVSLVHLHEQTLFLNGNDVLALSPSLSYDFALMKGAHIASGSVFNIKVSGTGIMAFTSRGDVVTLEASPENPVYTDPNSTVAWTHQPSTKMALSMKSIVGRGSGEEVQFEFKGGVVIVQPFEEVPV 245          
BLAST of Ggra178.t1 vs. uniprot
Match: A0A2V3J5K9 (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K9_9FLOR)

HSP 1 Score: 229 bits (584), Expect = 3.680e-65
Identity = 118/278 (42.45%), Postives = 175/278 (62.95%), Query Frame = 0
Query:    5 SSLPPGWFCLHTAEGRPYYHCRATGETSWTPPDRQASPSTSA-NVQPTSKTASPHKAPANICSLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLMRGAGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTHMPAIKTDLNMKSFLGRGTGEEFQLAFTQGVVVVQP 281
            S  P GW  L T  G P Y+  +       P     +P T A + +  +   S    P +   L   V  +  + +G  +FE+E D++L+I L      FAWIK G++IAR G +KF+RQ  REQG G ++KKA+TGEG+ LV+C+G+G+ YCAD+AK +SV++L ++ +Y+N  +VLALSSSL+Y+ KL+  AGM A GL +++I+G G ++ T      ++ ATP++P+YS P+ATVAWTH P+   DL+ +   GR TG+E QL FT G V++QP
Sbjct:    4 SEPPQGWRLLCTPGGHPLYYSTSDTPLLPAPSPXXXTPVTQAVSRRIAAAPRSRELPPPSRYILPTLVENTRAKAKGYPVFEVERDRVLQINLGGSHDSFAWIKAGTVIARRGTVKFTRQGFREQGAGLLVKKAVTGEGLKLVQCKGSGIVYCADDAKAVSVIELRKQTIYVNSPNVLALSSSLRYEFKLLSNAGMAASGLLSLKISGLGFLSVTSLKGAIMMTATPDDPLYSKPDATVAWTHHPSFTVDLSPRLLTGRATGQEVQLKFTHGFVIIQP 281          
BLAST of Ggra178.t1 vs. uniprot
Match: A0A7J4FRD8 (AIM24 family protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A7J4FRD8_9EURY)

HSP 1 Score: 223 bits (569), Expect = 4.240e-64
Identity = 110/225 (48.89%), Postives = 159/225 (70.67%), Query Frame = 0
Query:   66 SLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLMRG-AGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTH--MPAIKTDLNMKSFLGRGTGEEFQLAFT-QGVVVVQPFEETY 286
            S+ +F+  +  R+ G   FELE D+LL I L+ R     W K GSM+A  G +KF+R+ + E G GK++KKA+TGEG++L K EGTG  Y AD  K +S++ L  + +Y+NGND++A   ++K+D+KL++  AG++AGGLFNV++ G+GMVA T H     LK TP+ PV++DPNATVAW+    P IKTD+++K+ +GRG+GE  Q+AF  +G VVVQP+EE Y
Sbjct:    5 SIDEFIEATGQRDLGEGTFELERDRLLEINLDGRV----WTKKGSMVAYAGDVKFTREGVMEHGLGKMVKKAVTGEGVSLTKIEGTGKVYLADEGKKVSIINLDNQSIYVNGNDLIAFEETIKWDIKLLKKVAGIMAGGLFNVKLEGTGMVAITTHYDPLTLKVTPDQPVFTDPNATVAWSGNLSPDIKTDVSLKTLVGRGSGESLQMAFRGEGFVVVQPYEEVY 225          
BLAST of Ggra178.t1 vs. uniprot
Match: A0A520K0F8 (AIM24 family protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A520K0F8_9EURY)

HSP 1 Score: 222 bits (566), Expect = 1.140e-63
Identity = 110/225 (48.89%), Postives = 158/225 (70.22%), Query Frame = 0
Query:   66 SLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLMRG-AGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTHM--PAIKTDLNMKSFLGRGTGEEFQLAFT-QGVVVVQPFEETY 286
            S+ +F+  +  R+ G  +FELE D++L + L+       W K GSMIA  G +KF+R+ + E G GK++KKA+TGEG++L K EGTG  Y AD  K IS++ L  + +Y+NGND+LA   S+K+D+K++R  AG++AGGLFNV++ G+GM+A T H     LK TPE PV++DPNATVAW+    P IKTD+++K+ +GRG+GE  Q+AF   G VV+QP+EE Y
Sbjct:    5 SIDEFIEATGQRDLGEGVFELERDRMLELNLDGTI----WTKKGSMIAYTGGVKFTREGVLEHGLGKLVKKAVTGEGVSLTKVEGTGKVYLADEGKKISIISLDNQSIYVNGNDLLAFEESIKWDIKILRKIAGIMAGGLFNVKLEGTGMIAITTHYDPLTLKVTPEQPVFTDPNATVAWSGSLSPDIKTDVSLKTLVGRGSGESLQMAFKGDGFVVIQPYEEVY 225          
BLAST of Ggra178.t1 vs. uniprot
Match: A0A2N5H588 (Uncharacterized protein n=1 Tax=Bacillus sp. T33-2 TaxID=2054168 RepID=A0A2N5H588_9BACI)

HSP 1 Score: 222 bits (566), Expect = 1.140e-63
Identity = 113/226 (50.00%), Postives = 157/226 (69.47%), Query Frame = 0
Query:   66 SLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLM-RGAGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTHM--PAIKTDLNMKSFLGRGTGEEFQLAFT-QGVVVVQPFEETYV 287
            S+++FV+Q+  +++G  LFELE  ++L I LN +     W K G+M++  G IKF R+ + E G GK+ KKALTGEG +L+K  GTG  Y AD  K IS++ L  E +++NGND+LA   S+++D+KL+ R AGMLAGGLFNV + GSGM+A T H     L  T +NPVY+DPNATVAW+    P   TD+++K+FLGRG+GE  Q+ F+  G VVVQP+EE Y+
Sbjct:    5 SIEEFVNQTKQQDKGEGLFELETPRMLEINLNGQV----WAKAGAMVSYRGSIKFEREGVFEHGIGKMFKKALTGEGTSLMKANGTGKLYVADQGKKISILNLRNESIFVNGNDLLAFEPSIQWDIKLLKRVAGMLAGGLFNVRLEGSGMIAITSHYEPLTLLVTSDNPVYTDPNATVAWSGNLEPEFVTDVSLKTFLGRGSGESIQMKFSGNGFVVVQPYEEVYI 226          
BLAST of Ggra178.t1 vs. uniprot
Match: A0A2N0Z3F8 (Uncharacterized protein n=1 Tax=Niallia nealsonii TaxID=115979 RepID=A0A2N0Z3F8_9BACI)

HSP 1 Score: 222 bits (566), Expect = 1.140e-63
Identity = 111/231 (48.05%), Postives = 156/231 (67.53%), Query Frame = 0
Query:   66 SLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLMRG-AGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTH--MPAIKTDLNMKSFLGRGTGEEFQLAFT-QGVVVVQPFEETYVVDSHS 292
            SLQ F+ ++  +++G  LFELE  ++L I LN +     W K GSM++  G IKF+R+ + E G G ++KKA TGEG +L+K EG G  Y AD  K I+++ L  E +Y+NGND+LA   S+ +D+KLM+  AGM++GGLFN+ ++G+GMVA T H     LK T  NPV++DPNATVAW+    P   TD+++K+F GRG+GE  Q+ F+  G VVVQPFEE Y  +S S
Sbjct:    5 SLQDFIKETEQKDKGEGLFELETPRMLEINLNKQI----WAKAGSMVSYRGRIKFTREGVLENGLGTLLKKAFTGEGASLMKAEGEGTLYLADQGKKITILHLQNESIYVNGNDLLAFEPSINWDIKLMKKIAGMMSGGLFNIRLSGTGMVAITSHYEPLTLKVTKNNPVFTDPNATVAWSGDLQPDFVTDISLKTFFGRGSGESIQMKFSGDGFVVVQPFEEVYYAESKS 231          
BLAST of Ggra178.t1 vs. uniprot
Match: A0A7J9TTP3 (AIM24 family protein n=2 Tax=Methanosarcinales TaxID=94695 RepID=A0A7J9TTP3_9EURY)

HSP 1 Score: 222 bits (565), Expect = 1.540e-63
Identity = 109/225 (48.44%), Postives = 158/225 (70.22%), Query Frame = 0
Query:   66 SLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLMRG-AGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTH--MPAIKTDLNMKSFLGRGTGEEFQLAFT-QGVVVVQPFEETY 286
            S+ +F+  +  R+ G   FELE D+LL I L  +     W K+GSM+A  G IKF+R+ + E G GK++KKA+TGEG+ L K EGTG  Y AD+ K ISV+ L ++ +++NGND+LA   S+ +D+K+++  AG++AGGLFNV++ G+GM+A T H     LK TPE PV++DPNATVAW+    P +KTD+++K+F+GR +GE  Q+AF   G VV+QP+EE Y
Sbjct:    5 SIDEFIDSTGQRDLGEGTFELERDRLLEINLEGKV----WTKMGSMVAYLGDIKFTREGVMEHGIGKMLKKAVTGEGVRLTKAEGTGKLYLADSGKKISVINLDKQSIFVNGNDLLAFEESIMWDIKMLKKVAGLMAGGLFNVKLEGTGMIAITTHYDPLTLKVTPETPVFTDPNATVAWSGNLQPDLKTDVSLKTFVGRSSGESLQMAFKGDGFVVIQPYEEVY 225          
BLAST of Ggra178.t1 vs. uniprot
Match: A0A160MEC4 (Uncharacterized protein n=23 Tax=cellular organisms TaxID=131567 RepID=A0A160MEC4_9BACI)

HSP 1 Score: 222 bits (565), Expect = 1.540e-63
Identity = 116/225 (51.56%), Postives = 151/225 (67.11%), Query Frame = 0
Query:   66 SLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLM-RGAGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAW--THMPAIKTDLNMKSFLGRGTGEEFQLAFT-QGVVVVQPFEETY 286
            S+++FV Q+  +++G  LFELE  ++L I L S+     W K G M++  G IKF R+ I E G GK+ KKALTGEG  L+K  G G  Y AD  K IS++ L  + +++NGND+LA   S+ +D+KLM R AGMLAGGLFNV + G+GMVA T H     L  TP+NPVY+DPNATVAW  T  P   TD++ K+FLGRG+GE  Q+ F+  G VVVQPFEE Y
Sbjct:    5 SIEEFVKQTKQQDKGEGLFELETPRMLEINLTSQV----WAKAGGMVSYRGQIKFEREGILEHGLGKMFKKALTGEGAALMKATGNGKLYLADQGKKISILNLDGDAIFVNGNDLLAFEPSISWDIKLMKRMAGMLAGGLFNVRLEGTGMVAITSHYEPLTLLVTPDNPVYTDPNATVAWSGTLQPEFVTDISFKTFLGRGSGESIQMKFSGNGFVVVQPFEEVY 225          
BLAST of Ggra178.t1 vs. uniprot
Match: AIM24 family protein n=1 Tax=Methanolobus bombayensis TaxID=38023 RepID=UPI001AEA08D1 (AIM24 family protein n=1 Tax=Methanolobus bombayensis TaxID=38023 RepID=UPI001AEA08D1)

HSP 1 Score: 222 bits (565), Expect = 1.590e-63
Identity = 107/223 (47.98%), Postives = 159/223 (71.30%), Query Frame = 0
Query:   66 SLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRTSPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEGTGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLMRG-AGMLAGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTH--MPAIKTDLNMKSFLGRGTGEEFQLAFT-QGVVVVQPFEE 284
            S+ +FV  +  ++ G   FELE D++L + L+ R     W+K+G+M+A  G +KF+R+ + E G GK++KKA+TGEG+TL K EG G  Y AD+ K IS++ L  E +Y+NGND+LA   S+K+D+K+M+  AGM+AGGLFNV++ G+GM+A T H     L+ TP+ PV++DPNATVAW+   +P IKTD+++K+ +GR +GE  Q+AF   G VV+QP+EE
Sbjct:    5 SIDEFVKNTGQKDLGQGKFELERDRMLEVNLDGRI----WMKMGAMVAYLGDVKFTREGVLEHGLGKLVKKAVTGEGVTLTKAEGAGKVYLADSGKKISIINLDNEAIYVNGNDLLAFEESIKWDIKMMKKVAGMMAGGLFNVKLEGTGMIAITTHYDPLTLRVTPDRPVFTDPNATVAWSENLVPDIKTDISLKTLVGRSSGESLQMAFKGDGFVVIQPYEE 223          
The following BLAST results are available for this feature:
BLAST of Ggra178.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVV57.540e-15251.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGG87.240e-7955.86Altered inheritance of mitochondria protein 24, mi... [more]
A0A2V3J5K93.680e-6542.45Altered inheritance of mitochondria protein 24, mi... [more]
A0A7J4FRD84.240e-6448.89AIM24 family protein n=1 Tax=Methanosarcinales arc... [more]
A0A520K0F81.140e-6348.89AIM24 family protein n=1 Tax=Methanosarcinales arc... [more]
A0A2N5H5881.140e-6350.00Uncharacterized protein n=1 Tax=Bacillus sp. T33-2... [more]
A0A2N0Z3F81.140e-6348.05Uncharacterized protein n=1 Tax=Niallia nealsonii ... [more]
A0A7J9TTP31.540e-6348.44AIM24 family protein n=2 Tax=Methanosarcinales Tax... [more]
A0A160MEC41.540e-6351.56Uncharacterized protein n=23 Tax=cellular organism... [more]
AIM24 family protein n=1 Tax=Methanolobus bombayensis TaxID=38023 RepID=UPI001AEA08D11.590e-6347.98AIM24 family protein n=1 Tax=Methanolobus bombayen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 6..38
e-value: 5.9E-7
score: 39.1
IPR001202WW domainPFAMPF00397WWcoord: 7..36
e-value: 1.0E-6
score: 28.7
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 11..36
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 5..38
score: 13.9494
IPR001202WW domainCDDcd00201WWcoord: 8..37
e-value: 1.75184E-7
score: 45.9818
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 84..281
e-value: 1.3E-21
score: 77.3
NoneNo IPR availableGENE3D2.20.70.10coord: 1..42
e-value: 1.3E-8
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..58
NoneNo IPR availablePANTHERPTHR38074FAMILY NOT NAMEDcoord: 65..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 646..667
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 748..804
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 668..723
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 608..634
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 724..747
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..607
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 635..645
NoneNo IPR availableTMHMMTMhelixcoord: 725..747
NoneNo IPR availableTMHMMTMhelixcoord: 645..667
NoneNo IPR availableTMHMMTMhelixcoord: 610..632
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10Mitochondrial biogenesis AIM24coord: 82..291
e-value: 8.1E-32
score: 112.3
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 3..37
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 86..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000158_piloncontigtig00000158_pilon:61336..65744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra178.t1Ggra178.t1Gracilaria gracilis GNS1m malemRNAtig00000158_pilon 61336..65744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra178.t1 ID=Ggra178.t1|Name=Ggra178.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=805bp
MQDLSSLPPGWFCLHTAEGRPYYHCRATGETSWTPPDRQASPSTSANVQP
TSKTASPHKAPANICSLQQFVSQSLVREQGLSLFELEGDKLLRITLNSRT
SPFAWIKIGSMIARHGHIKFSRQSIREQGFGKIMKKALTGEGMTLVKCEG
TGVAYCADNAKIISVVQLSQEKLYLNGNDVLALSSSLKYDVKLMRGAGML
AGGLFNVEITGSGMVAFTCHGSVSVLKATPENPVYSDPNATVAWTHMPAI
KTDLNMKSFLGRGTGEEFQLAFTQGVVVVQPFEETYVVDSHSHQFSTADH
ALQRQVNNNIGPSGTLTILHRLRDAIGTAVQTWGFGPGRKHDIRHTRLNS
PLPFVYRDTVSALSRSECTESSSDSGCELLTKGFGTVGVVRYSFSAEREN
IVGTSTQVQTACRCIGPDCDKALLMRPVNITERRQDGNVYTTAKKSCIYQ
FYEGDFTDCHAETLRMQQKASAAETRAGYFTFEVDASQHHQGIWKAVGHR
GWDYGCVKDDFYSLPTVNLSAPMANISSDIHQYPPSAREGIPSLNQSDDC
RPPPNVRYFRDADQREGEECAAAFQFAIAGASFLGTQMDEVAIGKDQRTY
IRELPTLLVFWEIMILICAATLGLYFAISAFLRFRKKGEWSYSRMLKLLA
VQLMSLVFEGLPLYFALSLESVASRWTGRFAYMGATVALGRDVLQPQAVA
HGNVLVLTAVVGESSFASTHLVTVAMFSAVVNLAAVVIVALVLFAFFSNR
ARQTEHAEQTGHMEAKFVRAFTTLRAQHRCYCESSECASSKVTPMSSFDD
LCVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR002838AIM24
IPR036983AIM24_sf
IPR036020WW_dom_sf
IPR016031Trp_RNA-bd_attenuator-like_dom