Ggra4940.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4940.t1
Unique NameGgra4940.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length380
Homology
The following BLAST results are available for this feature:
BLAST of Ggra4940.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 211..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..379
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..190
NoneNo IPR availableTMHMMTMhelixcoord: 189..211
NoneNo IPR availableTMHMMTMhelixcoord: 221..240

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000157_piloncontigtig00000157_pilon:327179..328318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4940.t1Ggra4940.t1Gracilaria gracilis GNS1m malemRNAtig00000157_pilon 327179..328318 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4940.t1 ID=Ggra4940.t1|Name=Ggra4940.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=380bp
MTPEQIGEEYVRAAQILRDTREFGRKPSASRSALRHTFDESRTQLHPRAV
HFASQIVQLAQQVDGELSDDAFRSKYLVNLGAFSRITTPSTDPQELRKIA
FAYVPITLDKYLSEACPDAPSRVFDFYKPRLQQIHGTSESVQRSSDPDAI
ERGNLQMVKLEDRDLLPDAIPRVWPMSCGTEGYCIQIRGGIFTASLVIIA
SCVPTIVYLVLRVHETDPETVIQTLLSILASTLFILSSPFHRTIFNNWRI
SEALFGLMTLDGDTWRNITSQRKRREVGIGLITQGDMKLLSNSAGYAAPY
SGHLDPGPMMLSILTFHPLHRILVDQDGEIVLAYGDGNAVKLWVPLGNGG
RYLSAQRYTNMRWWYMLEVPRQAGTLLVI*
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