Ggra9893.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9893.t1
Unique Name	Ggra9893.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	162

Homology

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BLAST of Ggra9893.t1 vs. uniprot
Match: A0A2V3IJS4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJS4_9FLOR)

HSP 1 Score: 201 bits (510), Expect = 1.980e-63
Identity = 103/171 (60.23%), Postives = 123/171 (71.93%), Query Frame = 0

Query:    1 MHSAFVNPIPMLRATQQRVSTSVKVCMSEKPSDESGNTPATPPPAPK---------NPKRTVRSNASFRNEFLPEFGRKGPGSGPPWDLRPKSLKKDADDPEVCGSCRGTGRMTCTFCSGTSFYTEDGKELKCPACKGKK-VTCSVCFGSKKNIELEGNWWERGVAALFRK 161
            M SAFV+ IP L++T  RV TS  +CM+EKP+DES        P P+         + K+TV+SNASF+NEFLPEFG KGPGS PPWDLRPKSL+K+ ++PEVC  CRGTG MTC+FCSGT F   DG   KCPAC GKK V     FG+KKNIELEG+WWE+G+AALF K
Sbjct:    1 MQSAFVSAIP-LQST--RVRTSPSICMTEKPADESSQ------PKPEXXXXXXXXXSRKKTVKSNASFKNEFLPEFGVKGPGSRPPWDLRPKSLRKEVENPEVCDCCRGTGIMTCSFCSGTDFQKADGSFSKCPACDGKKQVXXXXXFGTKKNIELEGSWWEKGIAALFSK 162

[Close]

BLAST of Ggra9893.t1 vs. uniprot
Match: R7QR66 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR66_CHOCR)

HSP 1 Score: 170 bits (430), Expect = 2.960e-51
Identity = 82/161 (50.93%), Postives = 106/161 (65.84%), Query Frame = 0

Query:    4 AFVNPIPMLRATQQRVSTSVK--VCMSEKPSDESGNTPATPPPAPKNPKRTVRSNASFRNEFLPEFGRKGPGSGPPWDLRPKSLKKDADDPEVCGSCRGTGRMTCTFCSGTSFYTEDGKELKCPACKGK-KVTCSVCFGSKKNIELEGNWWERGVAALFRK 161
            AFV+P+P+L    QR    VK  VCM+    DE   + A  P     PK+T++S A++ N FLP+FGRKGPGS P WDLRP SL+K+ +   +C  C+GTG   C+FCSG +    DGK   CPAC G   V CSVCFG+KK IE+ GNWWERG+A+LF++
Sbjct:    6 AFVSPLPVL---SQRRPAPVKSRVCMAADKPDEKKPSGAGKPKPGSRPKKTIKSTATWANVFLPQFGRKGPGSNPDWDLRPASLRKEEEGRGICDHCKGTGSTKCSFCSGLTHVGADGKVRPCPACDGNVTVMCSVCFGTKKQIEMTGNWWERGIASLFKE 163

The following BLAST results are available for this feature:

BLAST of Ggra9893.t1 vs. uniprot

BLAST of Ggra9893.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IJS4	1.980e-63	60.23	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QR66	2.960e-51	50.93	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000009_pilon	contig	tig00000009_pilon:44958..45530 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9893.t1	Ggra9893.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000009_pilon 44958..45530 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9893.t1 ID=Ggra9893.t1|Name=Ggra9893.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=162bp
MHSAFVNPIPMLRATQQRVSTSVKVCMSEKPSDESGNTPATPPPAPKNPK
RTVRSNASFRNEFLPEFGRKGPGSGPPWDLRPKSLKKDADDPEVCGSCRG
TGRMTCTFCSGTSFYTEDGKELKCPACKGKKVTCSVCFGSKKNIELEGNW
WERGVAALFRK*