Ggra9541.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9541.t1
Unique NameGgra9541.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length388
Homology
BLAST of Ggra9541.t1 vs. uniprot
Match: A0A2V3IH98 (30S ribosomal protein S1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH98_9FLOR)

HSP 1 Score: 598 bits (1543), Expect = 7.570e-214
Identity = 303/356 (85.11%), Postives = 336/356 (94.38%), Query Frame = 0
Query:   32 TRMIVTARMANTENLSRFDRMRLRFGAPAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGVDPVPAEAA 387
            TRM+ TAR  + +++SRF+RMR RFG PAVSEE SGFTYSDFE+A++ F+Y FENGDIC+GRV QYERNGALVDIGAKASA+CPL EMSMIKV+K EHALTIGEDREFQ+ISREDANGQL+VSIRRIE+ARAWERVAQLQAEDVTV A V+++NRGG+LV IEGLRAFLPSSHTSIRTPREELIG+ELPLKFLEV +EKGRLVVSHRRA+VEKQMT+LVAGEVVEGV+RG+KPYGAF+DIGGVSGLLHVSQISHDHVGDI AV+PDGTV+KCMIINQDKEKGRISLSTKTLEPEPGDMLRD+ MVYE+AEEMAARYHKRLEEERKAAADVADDIVSTLD+  L+DIGVDPVPAEAA
Sbjct:    2 TRMVFTARAPSKDSISRFERMRQRFGVPAVSEEKSGFTYSDFEEAIADFDYRFENGDICSGRVYQYERNGALVDIGAKASAFCPLHEMSMIKVEKAEHALTIGEDREFQVISREDANGQLKVSIRRIEFARAWERVAQLQAEDVTVLAEVIAVNRGGSLVMIEGLRAFLPSSHTSIRTPREELIGVELPLKFLEVSAEKGRLVVSHRRAVVEKQMTNLVAGEVVEGVIRGVKPYGAFVDIGGVSGLLHVSQISHDHVGDIPAVVPDGTVVKCMIINQDKEKGRISLSTKTLEPEPGDMLRDAAMVYERAEEMAARYHKRLEEERKAAADVADDIVSTLDIGSLDDIGVDPVPAEAA 357          
BLAST of Ggra9541.t1 vs. uniprot
Match: R7QL07 (30S ribosomal protein S1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL07_CHOCR)

HSP 1 Score: 580 bits (1496), Expect = 3.370e-206
Identity = 300/389 (77.12%), Postives = 345/389 (88.69%), Query Frame = 0
Query:    1 MAFVNSFFGAAVATPQSSSKPR-SCSRAAPAPTRMIVTARM-ANTENLSRFDRMRLRFGAPAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGVDPVPAEAA 387
            MAFVNSF+G   A+ +++   R SCSR +  PTRM+ TAR  A+ +++S+FDRMR ++G   V  + SGFTY DFE A+S+F+YSFE GDIC+GRV QYE NGAL+DIGAKASAYCP+ EMSMI+VDKPE ALTIGEDREFQIISREDANGQL++SIRRIE+ RAWERVAQLQAEDVTVHA V+S+NRGG LV IEGLRAFLP SH S+RTPRE+L+G+ELPLKFLEVD+EK RLVVSHRRA+VEKQMT+LVAGE+V+GVVRGIKPYGAF+DIGG+SGLLHVSQISHDHV DIGAV+ DG+ IKCMIINQDKEKGRISLSTKTLEPEPGDM+RDS  VYE+A+EMAARYHKRLEEERKAAADVADDIVSTLDMA L+D+GVDPV  EAA
Sbjct:    1 MAFVNSFYGLPFASNRANPVSRKSCSRLSY-PTRMVATARPPASNQSMSKFDRMRDKYGLKRVQPKNSGFTYEDFETAISEFDYSFEEGDICSGRVFQYEPNGALIDIGAKASAYCPVAEMSMIRVDKPEQALTIGEDREFQIISREDANGQLKLSIRRIEFGRAWERVAQLQAEDVTVHAEVISVNRGGCLVMIEGLRAFLPGSHISLRTPREDLVGVELPLKFLEVDTEKNRLVVSHRRAVVEKQMTNLVAGEIVKGVVRGIKPYGAFVDIGGISGLLHVSQISHDHVADIGAVVQDGSEIKCMIINQDKEKGRISLSTKTLEPEPGDMIRDSAFVYEKADEMAARYHKRLEEERKAAADVADDIVSTLDMASLDDLGVDPVATEAA 388          
BLAST of Ggra9541.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: 30S ribosomal protein S1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3BAF (LOW QUALITY PROTEIN: 30S ribosomal protein S1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3BAF)

HSP 1 Score: 499 bits (1286), Expect = 7.640e-174
Identity = 245/342 (71.64%), Postives = 294/342 (85.96%), Query Frame = 0
Query:   46 LSRFDRMRLRFGAPAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGVDPVPAEAA 387
            +++FDRMRL+FG P   E  +GF+Y +F  AMS F+Y+F++GD C GRV QYE NGALVDIGAKASAYCPL EMSM ++DKPE AL IGEDREFQIIS ED+NGQLRVSIRR+E+  AWERVAQLQAEDVTV A VV +NRGG LV +EGLRAFLP SH ++R PRE+++G+ELPLKFLEVD+ K RLVVSHRRA+VE+Q+T+LV G++++GVVRG+KPYGAFID+ GVSGLLH+SQISHDH+ DI AVL +GT IKCM++ QDKEKGRISLSTKTLEPEPGD +RD +MV+++A+EM ARYH RLEEERKAAADVADDIVST DMA L+D+ +DPV A  A
Sbjct:   73 MTKFDRMRLKFGLPTPEEAKTGFSYDEFANAMSDFDYNFKDGDRCVGRVYQYEPNGALVDIGAKASAYCPLPEMSMHRLDKPERALDIGEDREFQIISNEDSNGQLRVSIRRLEFTLAWERVAQLQAEDVTVXAEVVQVNRGGCLVLVEGLRAFLPGSHMAMRNPREDMVGVELPLKFLEVDAAKNRLVVSHRRAMVERQITALVTGQIIQGVVRGVKPYGAFIDLNGVSGLLHISQISHDHISDISAVLKEGTEIKCMVLQQDKEKGRISLSTKTLEPEPGDFIRDPQMVFDRADEMCARYHARLEEERKAAADVADDIVSTXDMASLDDLAIDPVDAPMA 414          
BLAST of Ggra9541.t1 vs. uniprot
Match: A0A7S1TIC8 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIC8_9RHOD)

HSP 1 Score: 419 bits (1077), Expect = 3.260e-142
Identity = 212/339 (62.54%), Postives = 266/339 (78.47%), Query Frame = 0
Query:   41 ANTENLSRFDRMRLRFGAPAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGV 379
            A    +++FD+MRL+FG      E SGF+Y DFEQ M K+E SF   D+C+G+V   E+ GALVDIGAKASA+ PL EM++   D  E  L +G++R+FQIIS ED NGQL +S +R+E+ARAWER+AQ+Q+EDVTV A + S+NRGGA+V +E LR F+P SH S     EE IG E+ LKFLEVD EKGR+V+S RRA+VE+QMT L  G V+EG V+ IKPYGAF+D+GG+SGLLH+SQISHDHV +I   L  G  IKCMIINQDKEKGRISLSTKTLEPEPGDML++ ++VYE+AEEMA RYHK+ EEE+KAAADVA+DIV++LDMA LED+ +
Sbjct:   57 AGGAGMTKFDKMRLKFGFAKGKVEDSGFSYDDFEQEMGKYERSFVIDDVCSGKVYAVEQTGALVDIGAKASAFLPLSEMAIHPPDAIEDLLQVGDERDFQIISSEDKNGQLTISCKRLEFARAWERLAQMQSEDVTVRATITSVNRGGAMVEVENLRGFVPGSHMSSTANAEEKIGSEIRLKFLEVDQEKGRVVMSERRALVEQQMTDLAPGVVMEGTVKSIKPYGAFVDVGGMSGLLHISQISHDHVDNIEKSLIIGMSIKCMIINQDKEKGRISLSTKTLEPEPGDMLKNPQLVYEKAEEMAERYHKKREEEKKAAADVAEDIVASLDMASLEDLAI 395          
BLAST of Ggra9541.t1 vs. uniprot
Match: A0A1X6NTC5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTC5_PORUM)

HSP 1 Score: 385 bits (988), Expect = 8.380e-129
Identity = 200/334 (59.88%), Postives = 253/334 (75.75%), Query Frame = 0
Query:   47 SRFDRMRLRFGAPAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTP-REELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGV 379
            ++FDRMR ++GAPAV E   G  Y +FE A+    Y+F  GDI  G V Q + NGA+VD+GAKASA CP VE+S+ +    E  L  G++REFQII  E+A+G+L +SIRRIE++RAW RVAQL AEDVT+   V S+NRGG LV +EGLRAFLP SH S+R   +E+L+GMELPLK ++VD ++ +LVVSHR A    +MTSL  G VV G VR +KPYGAF+DIGGVSGLLH+SQISHDHV DI AVL  G  +K  ++NQDK+KGRISLSTK LE EPGDM+ DS  V+  AEE+A RYH R+EEER+AA+ VA+DIVS+LD+A L+D+G+
Sbjct:   49 TKFDRMRQKWGAPAVDESKGGM-YQEFESALEGLSYNFSEGDIIPGVVQQLDPNGAMVDVGAKASALCPTVEVSIAQGTALEDVLAPGDEREFQIIRSENADGELLLSIRRIEFSRAWARVAQLAAEDVTIMGTVTSVNRGGGLVVVEGLRAFLPGSHISVRRESQEDLVGMELPLKLIQVDPDEKKLVVSHRLAAAASRMTSLETGSVVAGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLSAGMEVKAYVMNQDKDKGRISLSTKVLENEPGDMMTDSAAVFAGAEEIAERYHARVEEERRAASSVAEDIVSSLDIASLDDLGL 381          
BLAST of Ggra9541.t1 vs. uniprot
Match: A0A1X6NLP1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLP1_PORUM)

HSP 1 Score: 383 bits (983), Expect = 5.470e-128
Identity = 210/385 (54.55%), Postives = 271/385 (70.39%), Query Frame = 0
Query:    2 AFVNSFFGAAVATPQSSSKPRSCSRAAPAPTRMIVTAR------MANTENLSRFDRMRLRFGAPAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTPREE-LIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGV 379
            AFV     AA    ++S+   +   AAP P     TAR      +A     ++FDRMR ++GAPAV +E+ G  Y +F  A+    Y+F  GDI  G V Q + NGA++D+GAKASA CP VE+S+ +    E  LT+G+ REFQII  E+A+G+L +SIRRIEY+RAW RVAQL AEDVT+   V S+NRGG LV +EGLRAFLP SH S+R  ++E L+GMELPLK ++VD  + +LVVSHR A    +MT+L  G VV G VR +KPYGAF+DIGGVSGLLH+SQISHDHV DI AVL  G  +K  ++NQ+K+KGRISLSTK LE EPGDM+ D+  V+  A++ AA YH R+EEER AA+ VADDIVS+LD+A L+D+G+
Sbjct:    3 AFVPGPLQAATPGSRASAFTGAAISAAPPPAAATATARRGAPTMVAAVGTPTKFDRMRQKWGAPAV-DESKGDMYEEFATALEGISYNFAEGDIIPGVVQQLDPNGAMIDVGAKASAVCPTVEVSIAQGVNLEDVLTLGDQREFQIIRSENADGELMLSIRRIEYSRAWARVAQLAAEDVTISGTVASVNRGGGLVTVEGLRAFLPGSHISVRREQQEDLVGMELPLKLIQVDPAEKKLVVSHRLAAAASRMTTLETGSVVTGTVRSVKPYGAFVDIGGVSGLLHISQISHDHVKDIEAVLTPGMEVKAFVMNQEKDKGRISLSTKVLEAEPGDMMTDAAAVFAGADDAAAAYHARVEEERVAASSVADDIVSSLDIATLDDLGL 386          
BLAST of Ggra9541.t1 vs. uniprot
Match: A0A5J4Z972 (30S ribosomal protein S1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z972_PORPP)

HSP 1 Score: 379 bits (972), Expect = 1.100e-126
Identity = 189/335 (56.42%), Postives = 252/335 (75.22%), Query Frame = 0
Query:   47 SRFDRMRLRFGA--PAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGV 379
            ++FD+MRL+FG   P    E SGF+Y +FE  M  ++     GD+  G V Q +  GA VDIGAKASA+ P  E+S++  ++ E  +  GE REF++ S ED NGQL VS+++IE+ R WER+AQLQAED+T  A V S+NRGGA+V +E LR F+P SH  +    ++++G  LPLKF+EVD EKGR+V+SHRRAIV+ QMT +  G VVEG+VRG+KPYG F+D+ G++GL+H+SQISHD V +   V+   + +KCM+I+QDKEKGRISLSTKTLEPEPGDML+    VY++AEEMA +YHKRLEEERKAAADVADDIVS+LD+A ++D+ +
Sbjct:   44 TKFDKMRLKFGVRTPKTQHE-SGFSYDEFESQMVNYDVKIGMGDLVQGTVVQIDSKGAFVDIGAKASAFLPEEELSIVGAERVEDFIEPGEQREFEVCSTEDVNGQLTVSLKKIEFRRCWERLAQLQAEDITTFATVESVNRGGAMVRVENLRGFIPGSHLGMAN-NQDIVGTNLPLKFIEVDPEKGRVVLSHRRAIVQSQMTDIETGAVVEGIVRGVKPYGIFVDVNGLTGLIHISQISHDRVDNPENVISVNSKVKCMVISQDKEKGRISLSTKTLEPEPGDMLKSPDAVYDRAEEMAEKYHKRLEEERKAAADVADDIVSSLDIANIDDLPI 376          
BLAST of Ggra9541.t1 vs. uniprot
Match: L1IVV6 (Ribosomal protein S1, chloroplastic n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1IVV6_GUITC)

HSP 1 Score: 370 bits (949), Expect = 6.680e-123
Identity = 189/346 (54.62%), Postives = 257/346 (74.28%), Query Frame = 0
Query:   39 RMANTENLSRFDRMRLRFGAPAV----------SEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPL 374
            +M  T   S+F++MR ++G P++          +++ +GF YSDFE A++KF+ +F+ GD+  G+V Q+E+ GALVDIG K+SAY    E SM +VD  E  L+I ++REFQIIS ED NGQ+R+SIR++E+ARAWERV Q+QAED T+ A ++SINRGGAL++ EGLR FLP SH   +   E+ +G  +PLKFLEVD  K RLVVS+RRA+VE ++ +L  G++V G+VR IKPYGAF+DIGG+SGLLH+SQISHDH+ D+  VL +G  IK MI+ QDK+KGR SLSTKTLE EPGDM+R+ +MV E AEE A RYH+RL+ E++A    A ++V+ LD+  L
Sbjct:   53 KMVATAPTSKFEKMRFKYGKPSLERGISQEMKDAQKIAGFDYSDFESAIAKFDNTFQVGDVVVGQVVQFEQGGALVDIGGKSSAYLGAAEASMQRVDDIEMFLSIADNREFQIISGEDENGQVRLSIRKLEFARAWERVRQIQAEDCTIMAEILSINRGGALINFEGLRGFLPGSHAP-QGMTEDTVGTMIPLKFLEVDQAKNRLVVSNRRAVVETKLVNLEPGQLVTGIVRSIKPYGAFVDIGGISGLLHISQISHDHISDVSKVLQEGQEIKAMILTQDKDKGRFSLSTKTLEAEPGDMIRNPEMVKENAEETAKRYHERLQAEQQARDQAASELVAGLDLNAL 397          
BLAST of Ggra9541.t1 vs. uniprot
Match: A0A0P4V0Q1 (SSU ribosomal protein S1p n=12 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A0P4V0Q1_9CYAN)

HSP 1 Score: 350 bits (899), Expect = 2.550e-116
Identity = 180/317 (56.78%), Postives = 234/317 (73.82%), Query Frame = 0
Query:   67 GFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSIRTPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGVDPVP 383
            GFT+ DF   + K++Y F  GD+  G V   E  GAL+DIGAK +AY P+ EMS+ ++D PE  L   E REF I++ E+ +GQL +SIRRIEY RAWERV QLQAED TV ++V + NRGGALV IEGLR F+P SH S R P+EEL+G ELPLKFLEVD E+ RLV+SHRRA+VE++M  L  GEVV G VRGIKPYGAFIDIGGVSGLLH+S+ISHDH+    +V      +K MII+ D E+GRISLSTK LEPEPGDM+++ ++VY++AEEMAA+Y + ++++ + AA  A +I   ++ AP+    V+ +P
Sbjct:   10 GFTHEDFAALLDKYDYHFSPGDVVAGTVFSLEPRGALIDIGAKTAAYIPIQEMSINRIDAPEEVLQSNETREFFILADENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSLVFATNRGGALVRIEGLRGFIPGSHISTRKPKEELVGEELPLKFLEVDEERNRLVLSHRRALVERKMNRLEVGEVVIGTVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVNDEVKVMIIDLDAERGRISLSTKQLEPEPGDMVKNPQVVYDKAEEMAAKYRENMKQQAQGAAIPAIEIPVAVEDAPVATEEVEAIP 326          
BLAST of Ggra9541.t1 vs. uniprot
Match: M1VII4 (Chloroplast ribosomal protein S1 n=3 Tax=cellular organisms TaxID=131567 RepID=M1VII4_CYAM1)

HSP 1 Score: 351 bits (900), Expect = 6.780e-115
Identity = 187/354 (52.82%), Postives = 245/354 (69.21%), Query Frame = 0
Query:   37 TARMANTENLSRFDRMRLRFGAPAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERNGALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQLRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFLPSSHTSI---------RTPR-EELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLVAGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTVIKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKRLEEERKAAADVADDIVSTLDMAPLEDIGVD 380
            T+    T   SRF+RMR ++G   VSE  +   Y + +QA+    Y +E   I  GRV  +E  GAL+D+GAK +AY PL E++M +V  PE  L IGE+R+FQII+ ED  GQLRVSI+RIE+ R WE++ Q  A D  V   VV++NRGGA V I+ LR FLP+SH  +           PR E+L+G ELP+K LEVD EK RLVVSHRRA+ EK + ++  G ++EG VRGIKPYG FI+ GGVSGLLH+SQISH+HV D+ +V   G  +K ++++QD+EKGR+SLSTK LEPEPGDMLR  + V+E+AEEMAARY +R+ EE +A A+ A DIV+ LD+A L   GVD
Sbjct:   69 TSSDTKTRAPSRFERMRAKYGLSDVSEPEAAPAYKELDQAVQNLSYKYELNMIVKGRVVHFEPRGALIDVGAKTAAYLPLSEVAMDRVSSPEEVLKIGEERDFQIIATEDTEGQLRVSIKRIEFTRTWEKLQQALANDEVVQCEVVAVNRGGASVRIDCLRGFLPASHIVLVPGFIPGLPSDPRLEDLMGKELPVKLLEVDPEKSRLVVSHRRALAEKSLKNVETGTILEGTVRGIKPYGVFIESGGVSGLLHISQISHEHVEDLTSVFTLGDKVKALVVSQDREKGRVSLSTKVLEPEPGDMLRSPQTVFERAEEMAARYRERIAEEERARAEYASDIVAGLDVASL---GVD 419          
The following BLAST results are available for this feature:
BLAST of Ggra9541.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IH987.570e-21485.1130S ribosomal protein S1 n=1 Tax=Gracilariopsis ch... [more]
R7QL073.370e-20677.1230S ribosomal protein S1 n=1 Tax=Chondrus crispus ... [more]
LOW QUALITY PROTEIN: 30S ribosomal protein S1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3BAF7.640e-17471.64LOW QUALITY PROTEIN: 30S ribosomal protein S1-like... [more]
A0A7S1TIC83.260e-14262.54Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NTC58.380e-12959.88Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NLP15.470e-12854.55Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z9721.100e-12656.4230S ribosomal protein S1 n=1 Tax=Porphyridium purp... [more]
L1IVV66.680e-12354.62Ribosomal protein S1, chloroplastic n=2 Tax=Gemini... [more]
A0A0P4V0Q12.550e-11656.78SSU ribosomal protein S1p n=12 Tax=Cyanobacteria/M... [more]
M1VII46.780e-11552.82Chloroplast ribosomal protein S1 n=3 Tax=cellular ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 337..357
NoneNo IPR availableGENE3D2.40.50.140coord: 70..168
e-value: 8.6E-17
score: 62.7
coord: 169..249
e-value: 1.3E-8
score: 36.5
NoneNo IPR availableGENE3D2.40.50.140coord: 250..328
e-value: 1.9E-21
score: 77.7
NoneNo IPR availablePANTHERPTHR10724:SF1130S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 63..361
NoneNo IPR availablePANTHERPTHR1072430S RIBOSOMAL PROTEIN S1coord: 63..361
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availableCDDcd04465S1_RPS1_repeat_ec2_hs2coord: 174..238
e-value: 4.49992E-20
score: 81.3511
NoneNo IPR availableCDDcd05687S1_RPS1_repeat_ec1_hs1coord: 87..156
e-value: 6.1333E-13
score: 61.3911
IPR035104Ribosomal protein S1-likePRINTSPR00681RIBOSOMALS1coord: 87..105
score: 36.09
coord: 153..172
score: 21.43
coord: 177..193
score: 26.89
coord: 195..212
score: 47.62
coord: 105..119
score: 34.29
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 250..320
e-value: 4.1E-22
score: 89.5
coord: 85..156
e-value: 1.3E-10
score: 51.3
coord: 172..238
e-value: 1.1E-9
score: 48.2
IPR003029S1 domainPFAMPF00575S1coord: 251..320
e-value: 1.4E-14
score: 54.2
coord: 84..156
e-value: 2.7E-8
score: 34.0
coord: 174..238
e-value: 5.9E-9
score: 36.2
IPR003029S1 domainPROSITEPS50126S1coord: 174..238
score: 12.664097
IPR003029S1 domainPROSITEPS50126S1coord: 87..156
score: 14.868959
IPR003029S1 domainPROSITEPS50126S1coord: 252..320
score: 20.201126
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 251..331
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 78..181
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 170..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000150_piloncontigtig00000150_pilon:9012..10175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9541.t1Ggra9541.t1Gracilaria gracilis GNS1m malemRNAtig00000150_pilon 9012..10175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9541.t1 ID=Ggra9541.t1|Name=Ggra9541.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=388bp
MAFVNSFFGAAVATPQSSSKPRSCSRAAPAPTRMIVTARMANTENLSRFD
RMRLRFGAPAVSEETSGFTYSDFEQAMSKFEYSFENGDICTGRVSQYERN
GALVDIGAKASAYCPLVEMSMIKVDKPEHALTIGEDREFQIISREDANGQ
LRVSIRRIEYARAWERVAQLQAEDVTVHAVVVSINRGGALVHIEGLRAFL
PSSHTSIRTPREELIGMELPLKFLEVDSEKGRLVVSHRRAIVEKQMTSLV
AGEVVEGVVRGIKPYGAFIDIGGVSGLLHVSQISHDHVGDIGAVLPDGTV
IKCMIINQDKEKGRISLSTKTLEPEPGDMLRDSKMVYEQAEEMAARYHKR
LEEERKAAADVADDIVSTLDMAPLEDIGVDPVPAEAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035104Ribosomal_protein_S1-like
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold