Ggra2336.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2336.t1
Unique NameGgra2336.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length301
Homology
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BLAST of Ggra2336.t1 vs. uniprot
Match: A0A2V3ITT2 (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITT2_9FLOR)

HSP 1 Score: 252 bits (643), Expect = 8.070e-80
Identity = 148/208 (71.15%), Postives = 164/208 (78.85%), Query Frame = 0 
Query:   94 PFCRKASKKKTQAKV--IPKLDVIQPLAPALAAVSHPLANIPLAPAIGAAYPFPALANPNLLPHPFVSLPLQAPRRAVRIAPMGVLPLPPPGAAALVADFHAAAAVVPDEPRRIQELSKAKRRGSTMNTVTSEQALTAEERTRQKRMLRNRESAARSRDKRRNRNIQLQTSIQRYREKKKEMDEVIQELKLLCDTMRHTLEKHNISVP 299
            PFCRK +K K+  +V    K+DV QPLAPAL A SH LA IP      AAYPFPALA P+LLPHP VSLPLQAPRRAVRIAPMGV+PLPPPGAAALVADFHAA  VV +E  R+ ELSK+KRR ST + V  EQ  + EE  RQKRMLRNRESAARSRDKRRNRN+ LQ+SI+RYR+KKKEMD  I ELK LC TMR TLEKHN+SVP
Sbjct:   66 PFCRKPAKSKSSIRVKSATKIDVAQPLAPALGASSHALATIPXXXXXXAAYPFPALAAPHLLPHPLVSLPLQAPRRAVRIAPMGVMPLPPPGAAALVADFHAA--VVAEENPRLNELSKSKRRTSTASAVVPEQTFSPEEMARQKRMLRNRESAARSRDKRRNRNMHLQSSIERYRDKKKEMDSAILELKALCQTMRSTLEKHNVSVP 271
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BLAST of Ggra2336.t1 vs. uniprot
Match: R7QF01 (BZIP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF01_CHOCR)

HSP 1 Score: 92.4 bits (228), Expect = 9.280e-18
Identity = 74/176 (42.05%), Postives = 104/176 (59.09%), Query Frame = 0 
Query:  143 PFPALANPNLLPHPFVSLPLQAPRRAVRIAPMGVLPLPPPG--AAALVADF--HAAAAVVP----DEPRRIQ---------------ELSKAKRRGSTMNTVTSEQALTAEERTRQKRMLRNRESAARSRDKRRNRNIQLQTSIQRYREKKKEMDEVIQELKLLCDTMRHTLEKHN 295
            P  A   P + P   VS+P+   RRAVRIAPMGVLPLPP    A ++V D     +A +VP     E   I+               ++ K KRRG+   + T+ + +T EERT+QKRMLRNRESAARSRDKR+ +NIQL+TSI ++ +K   +++V++EL+ +   M+  L   N
Sbjct:  176 PLAANGAPIMSPS-MVSVPMTVGRRAVRIAPMGVLPLPPQSTVATSMVPDLTNSTSAGLVPPASGSEGATIESHLNASTGGAGAIIGDMPKGKRRGTPGGSSTNPEGMTPEERTKQKRMLRNRESAARSRDKRKTKNIQLETSIAKHTKKNLMLEKVLRELQDVIRCMQQELSNQN 350
The following BLAST results are available for this feature:
BLAST of Ggra2336.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITT28.070e-8071.15BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QF019.280e-1842.05BZIP domain-containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 259..286
NoneNo IPR availableGENE3D1.20.5.170coord: 232..288
e-value: 3.7E-6
score: 28.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60
NoneNo IPR availableCDDcd14686bZIPcoord: 234..281
e-value: 3.63057E-9
score: 49.8513
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 234..288
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 228..293
e-value: 2.2E-4
score: 30.6
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 232..281
e-value: 7.8E-5
score: 22.7
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 236..251
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 231..294
score: 9.587881

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000122_piloncontigtig00000122_pilon:295139..296041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2336.t1Ggra2336.t1Gracilaria gracilis GNS1m malemRNAtig00000122_pilon 295139..296041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2336.t1 ID=Ggra2336.t1|Name=Ggra2336.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=301bp
MAETPGAQVAPVAHPPVTLPPNIPRVADDAQDDPTPLKIQPAEAPDNMLE
ELPDLSAAQSSTIPLETPTAQSTPDIGQMQTLESQPLCMPSKQPFCRKAS
KKKTQAKVIPKLDVIQPLAPALAAVSHPLANIPLAPAIGAAYPFPALANP
NLLPHPFVSLPLQAPRRAVRIAPMGVLPLPPPGAAALVADFHAAAAVVPD
EPRRIQELSKAKRRGSTMNTVTSEQALTAEERTRQKRMLRNRESAARSRD
KRRNRNIQLQTSIQRYREKKKEMDEVIQELKLLCDTMRHTLEKHNISVPP
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP