Ggra6929.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra6929.t1 vs. uniprot
Match: A0A2V3IPH9 (DNA-directed DNA polymerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPH9_9FLOR) HSP 1 Score: 352 bits (902), Expect = 2.940e-107 Identity = 185/306 (60.46%), Postives = 226/306 (73.86%), Query Frame = 0
Query: 2 FLGWLLKKVFRQLI---------------------------VDGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAGLLFVDRVNYGALPAPEKSSILTGEYVQTQTGSTSRKRTHASQDIPFARMEWYFPRYHPLPIAVLWSQVVEEFIRRPIIQRCVSEESGSLEQIEDNTETIGENEDSIETEKRNKKKLLLRLRGDGFAEEVKSLVRGLTTQLLEKVHEIREKTPSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVIC 280
FLGWL+KKVFRQLI +DGLRYAGFLEKT+ + PL R++RFHPVIGVYAGLLFVDR NYGALPAPE+S IL G++ + Q S++R+R +ASQDIP RMEW FPRY PLPIAVLW+QVVEEFIRRP++QR +EE + +++ + ++ E ++ KK LR RGDGFAEEVKSLVR LTTQLL+KVHE+REK+PSL FP+VPSA ++ RNPALEFVRS+CHVLS D++S+EEVA M R+LLQ+LGVR+FA EAQF +PA PVLLQ VIC
Sbjct: 2083 FLGWLVKKVFRQLIGELRNLGASVVYASSSRLLLATPKTQTIDGLRYAGFLEKTVKEKPLFRHLRFHPVIGVYAGLLFVDRFNYGALPAPEESLILNGDFAEAQALSSNRRRVYASQDIPLVRMEWDFPRYLPLPIAVLWTQVVEEFIRRPMVQRLRTEEMEASMELDCSEQS--------EHDEPKSKKRCLRPRGDGFAEEVKSLVRSLTTQLLQKVHEMREKSPSLTFPRVPSALTTVTARNRNPALEFVRSLCHVLSMDSTSTEEVADMRRNLLQMLGVREFATEAQFFDPALPVLLQDVIC 2380
BLAST of Ggra6929.t1 vs. uniprot
Match: R7QE00 (DNA polymerase epsilon catalytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE00_CHOCR) HSP 1 Score: 313 bits (802), Expect = 7.750e-94 Identity = 170/309 (55.02%), Postives = 212/309 (68.61%), Query Frame = 0
Query: 2 FLGWLLKKVFRQLI---------------------------VDGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAGLLFVDRVNYGALPAPEKSSILTGEYVQTQTGSTSRKRTHASQDIPFARMEWYFPRYHPLPIAVLWSQVVEEFIRRPIIQR--CVSEESGSLEQIEDNTETIGENEDSIETEKRNKKKLLLRLRGDGFAEEVKSLVRGLTTQLLEKVHEIREKTPSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
FLGWL+ KVFRQL+ VDGLRYAGFLEKT+ PL R++ F P+IGVY+GLLFVDR NYGALPAPE++SIL+GE+ QT + + +RT AS++IP+ARM W RY P+P+AVLW+QVVEEFIRRP++ R + E+GS+E + D + G +E I KK R RGDGFA+EV+ R LT QLLEK+HEIREKTP+LVFP VPS + + RNPALEFVRS+C+VL D ++SEEVA M RSLL+LLGVR+FA EAQF +PA PV L+ VIC
Sbjct: 1880 FLGWLITKVFRQLVGELKDLGATVVFASMSRLILATPKTQTVDGLRYAGFLEKTVKSKPLFRHVHFEPLIGVYSGLLFVDRFNYGALPAPEEASILSGEFGQTVSKNAVTRRTCASREIPYARMMWDMARYLPIPVAVLWTQVVEEFIRRPMVVRLRAIENEAGSIEMVSDTPASDGLSEQQIRATDLQKKHF--RPRGDGFADEVQDFTRNLTGQLLEKIHEIREKTPTLVFPSVPSIL-NATDRHRNPALEFVRSLCYVLGLDPAASEEVAGMRRSLLRLLGVREFAKEAQFKDPALPVPLRDVICT 2185
BLAST of Ggra6929.t1 vs. uniprot
Match: A0A7S3EEA9 (DNA polymerase epsilon catalytic subunit n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EEA9_9RHOD) HSP 1 Score: 150 bits (378), Expect = 4.100e-37 Identity = 97/267 (36.33%), Postives = 144/267 (53.93%), Query Frame = 0
Query: 17 DGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAGLLFVDRVNYGALPAPEKSSILTGEYVQTQTGSTSRKRTHASQDIPFARMEWYFPRYHPLPIAVLWSQVVEEFIRRPIIQRCVSEESGSLEQIEDNTETIGENEDSIETEKRNKKKLLLRLRGDGFAE--EVKSLVRGLTTQLLEKVHEIREKTPSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
DGLRYA F+E T+ + + IRF P+IGVY LLF D NY +PA E+SSIL G+ V+ +T R + ++++P +RM W Y P P+A LW Q V+ FIR P+ + V + E R K+K GDG + EV++ ++ +T ++ E + +I+E+TPSL P SA LK + P LE+V ++ S D S EV+++ RS L LL V +F+A A++ +P A L VIC+
Sbjct: 894 DGLRYAAFIESTLREKAMFGGIRFAPLIGVYQSLLFADPFNYSGVPALEESSILEGK-VKVFNSTT---RVYGARNLPPSRMSWEVVDYLPTPVASLWMQTVDAFIRHPLQELQVGNQ-----------------------ENRGKEK------GDGSKQISEVRNFLKSVTPEIFESIQQIQEQTPSLEIPT--SAI--LKRKLQPPVLEYVTALMRTFSLDDSVQGEVSNLRRSALLLLNVPEFSASAKYSSPKATFRLPNVICS 1123
BLAST of Ggra6929.t1 vs. uniprot
Match: A0A0F7SGV6 (DNA polymerase epsilon catalytic subunit n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SGV6_PHARH) HSP 1 Score: 82.8 bits (203), Expect = 5.440e-14 Identity = 78/270 (28.89%), Postives = 128/270 (47.41%), Query Frame = 0
Query: 16 VDGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAGLLFVDRVNYGALPA-PEKSSILTGEYVQTQTGSTSRKRTHASQDIPFARMEWYFPRYHPLPIAVLWSQVVEEFIRRPI-IQRCVSE-ESGSLEQIEDNTETIGENEDSIETEKRNKKKLLLRLRGDGFAEEVKSLVRG-LTTQLLEKVHEIREKTPSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
++ + YA +L N L R++ F ++ + LL++D N+G +P PE+S+ + + GS H ++W + P + + +V FI + +R S+ E L I++ T+ G D I+T++ K ++ ++ LV+ L TQ H E +L FP++P A + NPALEFV+++CHVL S EV + R+LL L+GVR+FA +A F NP + L VIC
Sbjct: 1906 INTVAYAKYLLTAANSNELFRHLSFE-IVNFWELLLWMDVQNHGGIPVMPEESA------QEIEVGS------HVID------LDWNIRSFLPPALQHDFEIIVSTFIDQMYRAKRQASDNEREPLRAIQNLTQATGPILDPIKTKEVGYGKKII---SKNLTRKMLGLVQNILITQRQAATHP--EIVETLTFPKLPGAHLKVS----NPALEFVKTVCHVLGLARDLSIEVQVLKRNLLDLVGVREFADQAIFKNPCEVLKLPSVICT 2147
BLAST of Ggra6929.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064513CF (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064513CF) HSP 1 Score: 80.9 bits (198), Expect = 2.420e-13 Identity = 73/284 (25.70%), Postives = 131/284 (46.13%), Query Frame = 0
Query: 15 IVDGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAGLLFVDRVNYGALPAPEKSSILTGEYV--QTQTGSTSRKRTHASQDIPFARMEWYFPRYHPLPIAVLWSQVVEEFIRRPIIQRCVSE-----ESGSLEQIEDNTETIGENEDSIETEKRNKKKLLLRLRGDGFAEEVKS--------LVRGLTTQLLE--KVHEIREKTPSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
I D +Y ++ I K L ++ P + LL++D NYG + LTG Q Q+ STS +A + W ++ P I + V+ +FI + + + + GS + ++ + +N D K+ K + L + + EE K + Q+L+ K E++++ FPQ+P + + NPALEFV+S+CHVLS D S ++V + ++L++++ VR+F+ EA+F +P +L +IC+
Sbjct: 1909 IDDARQYCNYVISVIKKKELFSWLTIKPS-RFWHNLLWMDISNYGGI-----CHQLTGGNANQQQQSSSTSPDVNNAIDGTLVSH--WNISKFLPQSIQSSFILVITDFIHKLYLHKERNRIQDVMNGGSGDVVDSTNSNVDDNNDKS---KKGDKSIDLTVSSNWTEEEDKPQSHKWSQVVDSNRIVQILQGLKYSELKDE-----FPQLPGSHLTFT----NPALEFVKSVCHVLSLDKSMQDQVHRLRKNLMKIINVREFSEEARFKDPCLSYVLPDLICS 2172
BLAST of Ggra6929.t1 vs. uniprot
Match: A0A8C4TAB8 (DNA polymerase epsilon catalytic subunit n=4 Tax=Polypteridae TaxID=8289 RepID=A0A8C4TAB8_ERPCA) HSP 1 Score: 78.6 bits (192), Expect = 1.440e-12 Identity = 73/276 (26.45%), Postives = 121/276 (43.84%), Query Frame = 0
Query: 12 RQLIVDGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAG----LLFVDRVNYGALPAPEKSSILTGEYVQTQTGSTSRKRTHASQDIP-FARMEWYFPRYHPLPIAVLWSQVVEEFIRRPIIQRCVSEESGSLEQIEDNTETIGENEDSIETEKRNKKKLLLRLRGDGFAEEVKSLVRGLTTQLLEKVHEIREKT-PSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
++ I D + Y ++ K+I + FH + ++ LL++D NYG + SS+L GE + Q +P A + YF I ++ + EE R + GS QI + E +G+ N ++ + E+ +T ++ +KV R T PS +FP +P + L NPALEF++ +C VLS D + + +V + R LL+L+ V +F+ EAQF +P +L VIC
Sbjct: 1881 KRRIEDAIAYVEYITKSIHSREI-----FHSLSLSFSRCWEFLLWMDLANYGGIKGKLPSSVLYGETTDKPEEDLIESNWNIMQYLPQVASCQNYFLMIISAYIVAIYHSMKEELRRNAPGATPIKRRGGS--QI--SQEPLGD---------ANALPGMITFSQEYVCSELTQNFFTITQKIQKKVTGTRHATEPSELFPVLPGSHLPLS----NPALEFIKYVCKVLSLDANVTNQVNKLKRDLLRLIDVGEFSEEAQFKDPCQSYILAEVICR 2134
BLAST of Ggra6929.t1 vs. uniprot
Match: A0A293N9H8 (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N9H8_ORNER) HSP 1 Score: 77.0 bits (188), Expect = 4.410e-12 Identity = 71/278 (25.54%), Postives = 121/278 (43.53%), Query Frame = 0
Query: 12 RQLIVDGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAGLLFVDRVNYGALPAPEKSSILTGEYVQTQTGSTSRKRTHASQDIPFARMEWYFPRYHP-LPIAVLWSQVVEEFIRRPIIQRCVSEESGSLEQIEDNTETIGENEDSIETEKRNKKKLLLRLRGDGFAEEVKSLVRGLTTQLLEKV-HEIREKTPSL------VFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
R + DGL +A ++ +I L ++ V + LL++D N+G G +K +D M W R+ P + ++ V+ +I +Q + E+ L Q++ T + E S+ + AE ++ V G Q L + +I++K PS VFP +P NPALEFV+++C VLS DT+ +E+V + R LL+L+GV +F+ A +++P +L VIC+
Sbjct: 933 RHRLDDGLAHAEYVINSIRNKELFHSLQIS-VQSTWELLLWLDSANHG--------------------GVRGKKSDDDPEDEAEVCMFWNLQRFLPETAVQDNFNAVIISYIEAVYLQ--MQREASQLSQVQRRTSSQAPKEQSVSKD---------------IAEYLQVFVGGELAQRLYGITQKIQQKMPSKIVNGENVFPSIPGHHLD----PSNPALEFVKAVCKVLSLDTNITEQVIKVRRDLLKLIGVGEFSDHATWIDPCLSFVLTEVICS 1168
BLAST of Ggra6929.t1 vs. uniprot
Match: A0A6P8IMS9 (DNA polymerase epsilon catalytic subunit n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IMS9_ACTTE) HSP 1 Score: 77.0 bits (188), Expect = 4.750e-12 Identity = 76/286 (26.57%), Postives = 121/286 (42.31%), Query Frame = 0
Query: 12 RQLIVDGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAGLLFVDRVNYGALPAPEKSSILTGEYVQTQTGSTSRKRTHAS------QDIPFARMEWYFPRYHPLPIAVLWSQVVEEFIRRPIIQRCVSEESGSLEQIEDNTETIGENEDSIETEKRNKKKLLLRLRGDGFAEEVKSLVRG-LTTQLLEKVHEIRE---------KTPSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
++ + D L Y F+ K+I L I P + L+++D+ N+G + + + TG TG S + + P M W +Y P + Q + + I S ++ T I S +++K + L FA+E ++G LT QL +I+ K PS FP +P ++ L NPALEFV+ IC VLS D ++ +V + R LL+L+GV +F+ EA F +P +L VIC
Sbjct: 1855 KRSVSDALAYVEFILKSIQSKDLFHSIDIVPT-SCWEFLMWLDQANHGGV----RGKLPTGAEENGDTGGDSEDEIQGTPENNNVHEEPQIEMNWNIGKYLPSGAS---CQNFFQIVIAGHIHAMYKHSSEERRTVQPGTTPIRRRGGSSQSQKTVQSSATPSL--VTFAQE---RIQGELTQQLFSITQKIQHTLSGDRSSNKDPSSEFPVLPGSYLPLN----NPALEFVKYICKVLSLDPNTLHQVNKLRRDLLKLIGVGEFSEEAAFKDPCLSFVLPEVICQ 2123
BLAST of Ggra6929.t1 vs. uniprot
Match: G3U301 (DNA polymerase epsilon catalytic subunit n=1 Tax=Loxodonta africana TaxID=9785 RepID=G3U301_LOXAF) HSP 1 Score: 76.6 bits (187), Expect = 6.390e-12 Identity = 74/278 (26.62%), Postives = 123/278 (44.24%), Query Frame = 0
Query: 12 RQLIVDGLRYAGFLEKTITKNPLSRYIRFHPVIGVYAG----LLFVDRVNYGALPAPEKSSILTGEYVQTQTGSTSRKRTHASQDIPFARMEWYFPRYHPLPIAV--LWSQVVEEFIRRPIIQRCVSEESGSLEQIEDNTETIGENEDSIETE-KRNKKKLLLRLRGDGFAEEVKSLVRGLTTQLLEKVHEIREKT-PSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
++ I D L Y ++ +I + FH + ++ LL++D NYG + SI G+ T G H+ + W ++ P + + +V +I + + EE + G ++ S ETE + D A E+ +T ++ +KV R T PS +FPQ+P + L NPALEF++ +C VLS DT+ + +V + R LL+L+GV +F+ EAQF +P +L VIC+
Sbjct: 1878 KRRIEDALAYVEYITNSIHSKEI-----FHSLTISFSRCWEFLLWMDPSNYGGIKGKVSPSIHCGQVRGTSLGELKPHSEHSRLE-DLLENNWNILQFLPQAASCQSYFLMIVSAYI--VAVYHSMKEELRRNAPGSTPVKRRGASQFSQETEGAAGALPGTITFSQDYVANELTQNFFTITQKIQKKVTGFRNSTEPSEMFPQLPGSHLLLN----NPALEFIKYVCKVLSLDTNITNQVNKLRRDLLRLVGVGEFSPEAQFRDPCRSHVLSEVICH 2143
BLAST of Ggra6929.t1 vs. uniprot
Match: DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018858E87 (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018858E87) HSP 1 Score: 76.3 bits (186), Expect = 8.600e-12 Identity = 40/97 (41.24%), Postives = 62/97 (63.92%), Query Frame = 0
Query: 185 LTTQLLEKVHEIREKTPSLVFPQVPSAFCSLKEGKRNPALEFVRSICHVLSFDTSSSEEVAHMPRSLLQLLGVRKFAAEAQFVNPAAPVLLQGVICN 281
+T ++ +K+H R P+ +FPQ+ + ++ NPALEFV++IC VLS D EV+ + R LL+L+GV +FAAEA++V+P +L VIC
Sbjct: 2045 ITQKMQKKLHTTRGSEPNALFPQLTGSHLLMQ----NPALEFVKAICKVLSLDQHVEAEVSKLRRDLLKLIGVGEFAAEAEWVDPCVSHVLPEVICK 2137 The following BLAST results are available for this feature:
BLAST of Ggra6929.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6929.t1 ID=Ggra6929.t1|Name=Ggra6929.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=287bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|