Ggra6947.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6947.t1
Unique NameGgra6947.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length394
Homology
BLAST of Ggra6947.t1 vs. uniprot
Match: A0A2V3J1Z2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Z2_9FLOR)

HSP 1 Score: 340 bits (873), Expect = 7.350e-112
Identity = 145/260 (55.77%), Postives = 194/260 (74.62%), Query Frame = 0
Query:    1 MTDPQAISPGTCRLGGEPQFGVLNCPGPCDLAAIENTYSYSNHGSPSNPARIFKRGEQTTIKYQRNNHGPGGFIRLTLVTPDQIMDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGG-SIQSNAPH--EPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQKPKSFKNGNKPEPLTPGSF 257
            MT+PQ++SP  CR+GGE + G+ NC GPCDL AI+    Y+NH SP NP+ ++ RG++ T+KY RNNHGPGGFIRLT+V    +MDK+ H+RNAFHYSCWGA P QA P+EL+ D FG+++VG+DGE+H   +GYY+A+V+IP  +PDGDYV+GWVW+GG G   +  N P   +P P GY+ D WSC++VRIEGG+ L  +Y P F ND+ Q++ EGC++AND PGIC  EPC   G +QKP++FK G+ P PLTP  +
Sbjct:    8 MTEPQSVSPRDCRVGGEAKSGIDNCHGPCDLRAIQG--GYANHASPDNPSAVYSRGQRITVKYTRNNHGPGGFIRLTIVPLGSMMDKAVHERNAFHYSCWGANPQQAGPDELQTDHFGYSYVGNDGEEHPYGQGYYVANVSIPKVIPDGDYVLGWVWFGGIGSVPVLGNYPQPPQPSPMGYYADQWSCAYVRIEGGLALESTYYPAFKNDISQYNPEGCLAANDSPGICTVEPCYTPGIFQKPRNFKAGSYPSPLTPNFY 265          
BLAST of Ggra6947.t1 vs. uniprot
Match: A0A2V3IS62 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS62_9FLOR)

HSP 1 Score: 340 bits (873), Expect = 9.550e-112
Identity = 151/259 (58.30%), Postives = 185/259 (71.43%), Query Frame = 0
Query:    1 MTDPQAISPGTCRLGGEPQFGVLNCPGPCDLAAIENTYSYSNHGSPSNPARIFKRGEQTTIKYQRNNHGPGGFIRLTLVTPDQIMDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGGSIQSN-APHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQKPKSFKNGNKPEPLTPGSFG 258
            MT PQ+ SP TCRLGGE Q G+ NC GPCDL  I     Y+N  +P++PA  + RG++ TIKY RNNH PGGFIR+T V P QIMD++AH RNAFHYSCWGA PV+A PNEL KD FGFT  GSDG QH   KGYY+  +TIPT +PDGDYV+GW WYGGTGG+++S  +P  P  + YFGDY+SCSFV++ GG     +Y+P F+NDM QFS  GCMS+ D  G CA EPC     +++P+ F +G  P PLTP  FG
Sbjct:   28 MTQPQSTSPKTCRLGGEAQHGIDNCRGPCDLRPIHAKRRYANFWNPAHPAATYSRGQRVTIKYTRNNHAPGGFIRMTFVRPSQIMDRNAHARNAFHYSCWGAHPVRARPNELGKDHFGFTMTGSDGAQHGFGKGYYVTHITIPTVLPDGDYVLGWAWYGGTGGNLKSGTSPQYPGKYSYFGDYYSCSFVKVRGG-EYTQTYKPKFINDMAQFSNAGCMSSTDNLGNCAREPCHKPAFFRRPRQFADGRHPPPLTPALFG 285          
BLAST of Ggra6947.t1 vs. uniprot
Match: R7QEV6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEV6_CHOCR)

HSP 1 Score: 329 bits (843), Expect = 6.820e-107
Identity = 154/278 (55.40%), Postives = 187/278 (67.27%), Query Frame = 0
Query:   31 LAAIENTYSYSNHGSPSNPARIFKRGEQTTIKYQRNNHGPGGFIRLTLVTPDQIMDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGGSIQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQKPKSFKNGNKPEPLTPGSFGVFLDKSFESETPVLTSISPDSNDPETSPVDISPSPVSAQEMNSILITTPP 308
            + AIE    YSN  SP NPA +++RG+   +KY RNNHGPGGFIRLTLV P+++MDK+AH +NAF+Y+CWGA P  A  NE+E D+FGF+FVGSDGEQH+ PKGYY+ DV IP+ VPDG YV+GWVWYGG GGS + N   EP P+GYFGDYWSCS+V I GG  L   + PVF NDM  +S  GCMSAND PG+C+ EPC+VD  YQ P+ FK+GN PE LTP  FG                +SP   D       ++P   SA E N  L  TPP
Sbjct:    1 MRAIEG--GYSNFDSPDNPAAVYQRGQTVRMKYTRNNHGPGGFIRLTLVAPEKMMDKNAHAKNAFYYTCWGANPQAAAANEMEADQFGFSFVGSDGEQHSHPKGYYVMDVKIPSVVPDGKYVLGWVWYGGGGGSAEGNVQQEPTPYGYFGDYWSCSYVEISGGSALESRHTPVFNNDMSGYSDVGCMSANDAPGVCSYEPCRVDSEYQAPRPFKDGNVPEDLTPEQFG---------------GVSPAGRDATPPAETVTPMDASASE-NMTLTPTPP 260          
BLAST of Ggra6947.t1 vs. uniprot
Match: A0A2V3IUR8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUR8_9FLOR)

HSP 1 Score: 304 bits (778), Expect = 3.370e-99
Identity = 136/232 (58.62%), Postives = 168/232 (72.41%), Query Frame = 0
Query:   27 GPCDLAAIENTYSYSNHGSPSNPARIFKRGEQTTIKYQRNNHGPGGFIRLTLVTPDQIMDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTG-GSIQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQKPKSFKNGNKPEPLTPGSF 257
            GPC L A +    YSN GS  NPAR ++RG+Q  +KY RNNHGPGGFIRL+LVT    M K+ H RNAFHYSCWGA   QA PNEL  D+FGF FVG+DGE H++P+ YY +  T+P CVPDG Y++GWVW+GGT  G I+ N P  P   G+F DYW+CS+VRI+GG  L  S +PVFVNDM QFS +GCM+ ND PG+C+ EPC  +G Y+KP+ FK+G+KP  LTP  F
Sbjct:   19 GPCQLKAAKG--GYSNFGSTINPAREYQRGQQFVVKYHRNNHGPGGFIRLSLVTLKDAMSKNVHTRNAFHYSCWGAFLKQAGPNELSTDRFGFNFVGNDGELHSAPRAYYQSFATVPRCVPDGVYILGWVWFGGTSLGPIKDNRPRRPDNRGFFSDYWACSYVRIKGGASLTSSCDPVFVNDMMQFSTDGCMAGNDSPGVCSYEPCISEGFYRKPQPFKDGSKPPSLTPSLF 248          
BLAST of Ggra6947.t1 vs. uniprot
Match: A0A2V3IFC9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC9_9FLOR)

HSP 1 Score: 303 bits (775), Expect = 9.130e-97
Identity = 142/246 (57.72%), Postives = 169/246 (68.70%), Query Frame = 0
Query:   85 MDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGGS-IQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQKPKSFKNGNKPEPLTPGSFGVFLDKSFESETPVLTSISPDSNDPETSPVDISPSPVSAQEMNSILI-----TTPPPVMEIMDTMEENPEHS 324
            M+K+ H+ NAFHYSCWGA PVQA  +ELEKD++GFTFVGSDGEQH +PKGYY  DVTIPTC+PDG+YVMGWVW+GGTGG+ I+ N P EP PWGYFGDYW+CSFVR+EGG PL+ SY+PVF NDM Q+S EGCMSAN+ PG CASEPC+VDG YQKP+ F  G  P PLTP +FG   + S                   TSPVD SPS + A+     +      +TP P+         NP  S
Sbjct:    1 MEKAVHQHNAFHYSCWGANPVQASSDELEKDRYGFTFVGSDGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWGYFGDYWACSFVRVEGGDPLSASYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNFGGIKENSL------------------TSPVDASPSNIPARTTPKTMYPSASPSTPVPIPSYTXXXXPNPSSS 228          
BLAST of Ggra6947.t1 vs. uniprot
Match: A0A2V3IBQ8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBQ8_9FLOR)

HSP 1 Score: 188 bits (477), Expect = 1.570e-52
Identity = 104/247 (42.11%), Postives = 131/247 (53.04%), Query Frame = 0
Query:   85 MDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFG-FTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGGS-IQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQKPKSFKNGNKPEPLTPGSFGVFLDKSFESETPVLTSISPDSNDPETSPVDISPSPVSAQEMNSILI-----TTPPPVMEIMDTMEENPEHS 324
            M+K+ H+ NAFH    G +  Q   + +   +    +     GEQH +PKGYY  DVTIPTC+PDG+YVMGWVW+GGTGG+ I+ N P EP PW              + G      Y+PVF NDM Q+S EGCMSAN+ PG CASEPC+VDG YQKP+ F  G  P PLTP +FG   + S                   TSPVD SPS + A+     +      +TP P+         NP  S
Sbjct:    1 MEKAVHQHNAFHLQLLG-RQFQFKRHPMSSKRIDTVSLCWQHGEQHGAPKGYYTVDVTIPTCIPDGNYVMGWVWFGGTGGTKIERNEPQEPKPWVILATIGHVRSFASKVGSTFR-LYQPVFQNDMSQYSEEGCMSANNMPGTCASEPCRVDGVYQKPRPFTEGRIPAPLTPDNFGGIKENSL------------------TSPVDASPSNIPARTTPKTMYPSASPSTPVPIPSYTXXXXPNPSSS 227          
BLAST of Ggra6947.t1 vs. uniprot
Match: R7QJR3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR3_CHOCR)

HSP 1 Score: 166 bits (421), Expect = 4.000e-44
Identity = 93/224 (41.52%), Postives = 125/224 (55.80%), Query Frame = 0
Query:   12 CRLG-GEPQFGVLNCPGPCDLAAIENTYSYSNHGSPSNPARIFKRGEQTTIKYQRNNHGPG--GFIRLTLVTPDQIMDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGGSIQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCK 232
            CR G G P+    +C GPC      +TY      SPS PA  ++RGEQ T+ + RNNHG G  GF+RLTLV  D++MD  AHK+  F  SCW +         L K K     V  + ++  +    Y A +T+PT  PDG YV+GW WYGG  G  + ++        +FGDY+SCSFVRIEGG  L+ S +PVF   +     +GC+S+ D  G+C  EPC+
Sbjct:   35 CRAGNGRPR----DCYGPCPAL---DTYGDPTGISPSRPAATWRRGEQKTVSWHRNNHGKGESGFVRLTLVPVDKMMDSRAHKKFTFQISCWSSG--------LHKCKSRNKHVCGNDKEGMA----YRAPITVPTAYPDGIYVLGWAWYGG--GDFKHDS--------FFGDYYSCSFVRIEGGARLSSSSKPVFAPGLNTKHRDGCLSSTDRVGVCKREPCR 229          
BLAST of Ggra6947.t1 vs. uniprot
Match: A0A2V3IVU4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVU4_9FLOR)

HSP 1 Score: 158 bits (400), Expect = 3.530e-41
Identity = 96/249 (38.55%), Postives = 130/249 (52.21%), Query Frame = 0
Query:    1 MTDPQAISP-GTCRLGGEPQFGVLNCPGPCDLAAIENTYSYSNHGSPSNPARIFKRGEQTTIKYQRNNHGPGGFIRLTLVTPDQIMDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGGSIQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVD--GSYQKPKSFKNG 246
            +T P+ IS   TCR+GG P +    C GPC        Y++       NPA  ++RG + T+ Y +NNH  GGF+RLTLV  D++M   AH+  AFHYSCW ++       E  +D       G D +        Y   +T+PT  PDG YV+GW WYGG  G             G +GDY+ CS+VRI+GG PL  +Y  +FV   G    +GC +A D  G+C +EPC  D  GS + P +F  G
Sbjct:   20 LTVPEPISKVETCRIGGNPGWESY-CGGPCP------DYNFRYDMRAENPAATWERGSRVTVHYSKNNH-VGGFMRLTLVPLDEMMRTEAHEALAFHYSCWSSELYYCDNKEQHRD------CGYDRDNLA-----YKTTITVPTIYPDGVYVLGWSWYGGGEGH------------GDYGDYYDCSYVRIQGG-PLTDTYHAMFVP--GPRYPDGCQAAVDRLGMCPTEPCPQDFWGSKKTPAAFHGG 234          
BLAST of Ggra6947.t1 vs. uniprot
Match: A0A2V3IQV8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQV8_9FLOR)

HSP 1 Score: 160 bits (405), Expect = 1.870e-40
Identity = 90/261 (34.48%), Postives = 128/261 (49.04%), Query Frame = 0
Query:    1 MTDPQAISP-GTCRLGGEPQFGVLNCPGPCDLAAIENTYSYSNHGSPSNPARIFKRGEQTTIKYQRNNHGPGGFIRLTLVTPDQIMDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGGSIQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQK--PKSFKNGNKPEPLTPGSFG 258
            +T P  +S    CR+GG   F + NCPGPC        Y+ +    PSNP  +F+RG    + + RNNH  GGF+R +LV  ++   K  H + AFHY+CW          +  +D             ++     Y   + IP   PDGDYV+GW WYGG             V +G+FGDY+ C++VR+ GG P+  SY P F    G    +GC +  D+ GIC  EPC+     +K  P  FK+G  P+P+    +G
Sbjct:   24 LTSPHPMSTIDGCRIGGTGGF-IGNCPGPCP------NYNIAADADPSNPTTVFQRGGYHRVVWTRNNH-EGGFVRWSLVPLNKRDSKHWHAKMAFHYNCWSVGRFTCNDFDFHRDC-----------HYDRQNEAYSKMLYIPPVFPDGDYVLGWTWYGGG------------VGYGHFGDYYDCAYVRVSGGEPVQESYVPTFSAGGGSTYEDGCEATVDDLGICWKEPCRPMRKTEKRVPAPFKDGKTPQPILSEWYG 253          
BLAST of Ggra6947.t1 vs. uniprot
Match: A0A2V3IRK5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRK5_9FLOR)

HSP 1 Score: 157 bits (397), Expect = 4.650e-40
Identity = 91/255 (35.69%), Postives = 131/255 (51.37%), Query Frame = 0
Query:    1 MTDPQAISPGTCRLGGEPQFGVLNCPGPCDLAAIENTYSYSNHG--SPSNPARIFKRGEQTTIKYQRNNHGPGGFIRLTLVTPDQIMDKSAHKRNAFHYSCWGAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGDYVMGWVWYGGTGGSIQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSYEPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQ-KPKSFKNGNKPEPL 252
            + DP       CR+G +      +C GPC L    + Y   NH   +  NPA  ++RG++  +++ R+NH   GF+RL LV  D++MDK AH++ AFH+ C      + P    +         G+D E     K     +V +PT  PDG YV GW WYGG  G  ++ +        +FGDY+SCSFV I+GGV +  +YEP +           C+S+ D  G+C  EPC V   Y+ +P  FKNG KPE +
Sbjct:   31 LADPLPTRELHCRVGAQQG---RDCYGPCPLP---DDYGRLNHPWINEHNPAETWRRGDKVKVRWHRDNHDGTGFVRLVLVPVDKMMDKKAHEKYAFHFLCMNEGLHRCPDRSYDT-------CGNDAEGMAWQK-----EVEVPTSYPDGVYVFGWSWYGG--GDYRAMS--------FFGDYYSCSFVEIKGGVAVTDAYEPTW-------DGHKCVSSTDRLGVCWKEPCHVGRMYEMEPAEFKNGIKPEAI 250          
The following BLAST results are available for this feature:
BLAST of Ggra6947.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1Z27.350e-11255.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS629.550e-11258.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEV66.820e-10755.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IUR83.370e-9958.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IFC99.130e-9757.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBQ81.570e-5242.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJR34.000e-4441.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IVU43.530e-4138.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQV81.870e-4034.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRK54.650e-4035.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..373

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:276813..278066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6947.t1Ggra6947.t1Gracilaria gracilis GNS1m malemRNAtig00000115_pilon 276813..278066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6947.t1 ID=Ggra6947.t1|Name=Ggra6947.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=394bp
MTDPQAISPGTCRLGGEPQFGVLNCPGPCDLAAIENTYSYSNHGSPSNPA
RIFKRGEQTTIKYQRNNHGPGGFIRLTLVTPDQIMDKSAHKRNAFHYSCW
GAKPVQAPPNELEKDKFGFTFVGSDGEQHNSPKGYYIADVTIPTCVPDGD
YVMGWVWYGGTGGSIQSNAPHEPVPWGYFGDYWSCSFVRIEGGVPLAPSY
EPVFVNDMGQFSAEGCMSANDEPGICASEPCKVDGSYQKPKSFKNGNKPE
PLTPGSFGVFLDKSFESETPVLTSISPDSNDPETSPVDISPSPVSAQEMN
SILITTPPPVMEIMDTMEENPEHSMGPDHGNFDIMPPLAPEETLPDNSSE
ETIEESEDELPEQRSEESRLDPDFIPTWYNNKFIKNIRKNWRY*
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