Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10111.t1.start1 | Ggra10111.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000113_pilon 152289..152291 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10111.t1.stop1 | Ggra10111.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000113_pilon 154304..154306 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10111.t1 ID=Ggra10111.t1|Name=Ggra10111.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=157bp
MDARRISNCESWHSRGEARRITAPERPLTVTEPISGPLIVRVPDAPALTT
CIHMTSPFFPVHVSSKLGISRNQKQLQTTTRFFAMCEWDLDKDSRGGLVR
IKVKDCGSSSCPSSDNYRRSRGQNDTILPAQKAESIAVSRSLPPCNVPSS
LSLHQM* back to topspliced messenger RNA >Ggra10111.t1 ID=Ggra10111.t1|Name=Ggra10111.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=471bp|location=Sequence derived from alignment at tig00000113_pilon:152289..154306+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACGCAAGACGCATTTCAAATTGCGAGTCATGGCATTCTAGAGGTGA
AGCACGGCGCATTACGGCACCTGAACGACCTCTGACTGTTACTGAGCCGA
TAAGTGGACCGCTTATAGTGCGCGTGCCTGATGCTCCGGCGCTCACTACC
TGCATCCACATGACATCTCCCTTCTTCCCAGTGCATGTCAGTTCTAAGCT
TGGAATTTCAAGAAATCAGAAGCAGCTGCAAACAACGACGAGGTTTTTCG
CAATGTGTGAGTGGGATCTCGACAAGGATAGTAGAGGTGGATTAGTCCGT
ATCAAAGTTAAAGATTGTGGGAGCAGTTCATGCCCTAGTTCTGATAACTA
CCGTCGAAGCCGGGGCCAGAATGACACCATTCTGCCCGCACAAAAGGCAG
AATCGATCGCAGTTAGTCGTTCTTTGCCTCCGTGCAATGTTCCAAGCAGT
CTGAGCCTTCATCAGATGTAG back to topprotein sequence of Ggra10111.t1 >Ggra10111.t1 ID=Ggra10111.t1|Name=Ggra10111.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=157bp
MDARRISNCESWHSRGEARRITAPERPLTVTEPISGPLIVRVPDAPALTT
CIHMTSPFFPVHVSSKLGISRNQKQLQTTTRFFAMCEWDLDKDSRGGLVR
IKVKDCGSSSCPSSDNYRRSRGQNDTILPAQKAESIAVSRSLPPCNVPSS
LSLHQM* back to topmRNA from alignment at tig00000113_pilon:152289..154306+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10111.t1 ID=Ggra10111.t1|Name=Ggra10111.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2018bp|location=Sequence derived from alignment at tig00000113_pilon:152289..154306+ (Gracilaria gracilis GNS1m male)
ATGGACGCAAGACGCATTTCAAATTGCGAGTCATGGCATTCTAGAGGTGA
AGCACGGCGCATTACGGCACCTGAACGACCTCTGACTGTTACTGAGCCGA
TAAGTGGACCGCTTATAGTGCGCGTGCCTGATGCTCCGGCGCTCACTACC
TGCATCCACATGACATCTCCCTTCTTCCCAGGTAACTCGAATACAACTTG
AAGCGGCGTTGCGTTTAAGAGAACCACAACTTCAGACCAGCGTAGTGATT
CCTCCTCAAGATCTTCTTCTGTCAGACCACCTTCTGTATGTATTTCCTTG
AGTTGCTTTAGCCGCAATCTTCGTAGAAAACTAGCTTTTCGTGAATATCT
TCCGCAGTTTCCATGCAGAAGATTTCAGGATGTGACCTGCGCAAGAGGAC
GAGTCCTCTAATACTGAACAGTGGACCATTCTTTCAGTTTTGTACTCCAA
CGAATCATGTTGATCTCATCTGAAGATTCGTATGAATTCTCATCGTCAAA
CTTTGTTCTGCACATTTCCTGTCCCGTCTGGATGAAAGGAATACCTTGGG
AAGTGAGGACTACAACCGCTGCTAACTTGTGCATTCGTCGTACGTCTTCT
TCGCTGAATTTGATTGTATCTGTCCTGGATCGAATGTAGTGATTTAAGTG
GTCCCATAGAGTACGATTGTCATGGCACTCGACGTAGTTGATGCTTTCCA
GTGGCGAATCGGCGAACATATCCACAGAGCCTATAATCCCACCTGACTGA
CTTCCGTAAGCCTACCACCGTCCATGATGAATGTCTCTTCGGTATCAAAG
GGAGAACCTCTAATCGCGTTGCGAAAGGTGTCGTTAAAGACTGCAAAACC
TTTGGAACGCTGTGAACCCTTGTCAGTTGCCTTTATTGGAGAGAGGCCAC
CGATCCAtgttagccgcgtctgacgcgtgcactgggggtgagcgaattgc
caaactccgcaatgcagtttggcaacatgtgagtcgaaagaaagccgtgc
gtcacgaagactcgacATTCTGCTTCCATTATCGAGCGTCGGTGTGGCGT
AAACATCACATTGACAAAGAAAGATTCGTGAGCGGCGAGCTCAGCACACA
CGTTGCGCTAGAGCACGCGTAGCGGGTAACTTTATATAGATCCTACATAC
ATACTGCGCTCTCTGAAACGCAACGATTCGCACTGTCACGCTCTACTTCT
TTTGGACGACGAGAAACTCTTTCTCTATGTTGTGACGCACGATGCTCTTC
TTGCTGCTATGAAGTTCCTTTCGGTTATACGAGTGATCTTCCAGATCACG
CTTGCCGGGCGATCCGCCTTCAACACAATTATATCAAGCGTGCCTGCAGT
GCTGCTTGTAGTGTTACCTGTATCTACACTACATAACCGAAATGCACCGC
TTCCAGTTTCGCCCAGGCCCTCCATGGACCAGATATGAGATATATTTACG
ACAACTCGTAGCCTTTCACTACCCGTAACCGAGCGAGATTAAGTTCAAAT
TTGTTTTGTCGACTTAAAACCAAACAGCGTCGAGGGTCTCATCTTCTCTT
GACGCGAAATACTTACAACCTAGTTGTGTATAACCGTCTGAAACATCTGT
GAGTCCACTACACGGACTTAGTGCATGTCAGTTCTAAGCTTGGAATTTCA
AGAAATCAGAAGCAGCTGCAAACAACGACGAGGTATGTTTTCAAACCTTT
TGAGCGCTCCCGAACCACTATTGCTACCTCTCTTTATCGTAGTACGTACC
TTCGTTACTGACGATTTAATCAAAATTACTTGAGAACAGGTTTTTCGCAA
TGTGTGAGTGGGATCTCGACAAGGATAGTAGAGGTGGATTAGTCCGTATC
AAAGTTAAAGATTGTGGGAGCAGTTCATGCCCTAGTTCTGATAACTACCG
TCGAAGCCGGGGCCAGAATGACACCATTCTGCCCGCACAAAAGGCAGAAT
CGATCGCAGTTAGTCGTTCTTTGCCTCCGTGCAATGTTCCAAGCAGTCTG
AGCCTTCATCAGATGTAG back to topCoding sequence (CDS) from alignment at tig00000113_pilon:152289..154306+ >Ggra10111.t1 ID=Ggra10111.t1|Name=Ggra10111.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=471bp|location=Sequence derived from alignment at tig00000113_pilon:152289..154306+ (Gracilaria gracilis GNS1m male)
ATGGACGCAAGACGCATTTCAAATTGCGAGTCATGGCATTCTAGAGGTGA
AGCACGGCGCATTACGGCACCTGAACGACCTCTGACTGTTACTGAGCCGA
TAAGTGGACCGCTTATAGTGCGCGTGCCTGATGCTCCGGCGCTCACTACC
TGCATCCACATGACATCTCCCTTCTTCCCAGTGCATGTCAGTTCTAAGCT
TGGAATTTCAAGAAATCAGAAGCAGCTGCAAACAACGACGAGGTTTTTCG
CAATGTGTGAGTGGGATCTCGACAAGGATAGTAGAGGTGGATTAGTCCGT
ATCAAAGTTAAAGATTGTGGGAGCAGTTCATGCCCTAGTTCTGATAACTA
CCGTCGAAGCCGGGGCCAGAATGACACCATTCTGCCCGCACAAAAGGCAG
AATCGATCGCAGTTAGTCGTTCTTTGCCTCCGTGCAATGTTCCAAGCAGT
CTGAGCCTTCATCAGATGTAG back to top
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