Ggra11139.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra11139.t1 vs. uniprot
Match: A0A2V3J3H2 (Putative RNA-binding protein RbpB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3H2_9FLOR) HSP 1 Score: 302 bits (773), Expect = 1.050e-99 Identity = 148/196 (75.51%), Postives = 165/196 (84.18%), Query Frame = 0
Query: 48 HLPRRTHVRPRQADVAAVSQDAFLQCVQCLAVYHVEPEELEGVARVVSCSACLHEWYATEDDLIWGDEQANAALAIAAEQSDGTNPFIAARGVEKKQQNGEDDGPINVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSDSAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEAKPRPHTGKKTASRSK 243
H PRR V P D A Q+AFLQC+QCLAVYHVEPEELEG RVV+CSACLHEWYA EDDLIWGDEQA+AAL +A E++ G+N F+AARGV KKQQ +DGPINVFVGNLSFRATEEDLYRAFSGYGAVL CELP+DSAG+P+GYAFVEMQSRQ+GM+AIECLQGTSIVGRD+SLS AKPR KK R+K
Sbjct: 76 HSPRRRRVTPVALDHAPGPQEAFLQCIQCLAVYHVEPEELEGPPRVVACSACLHEWYANEDDLIWGDEQASAALKLATERTQGSNAFVAARGVAKKQQAQNNDGPINVFVGNLSFRATEEDLYRAFSGYGAVLKCELPADSAGIPKGYAFVEMQSRQSGMKAIECLQGTSIVGRDISLSIAKPRTPDAKKATGRTK 271
BLAST of Ggra11139.t1 vs. uniprot
Match: R7QL30 (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL30_CHOCR) HSP 1 Score: 200 bits (509), Expect = 4.500e-59 Identity = 117/245 (47.76%), Postives = 145/245 (59.18%), Query Frame = 0
Query: 58 RQADVAAVSQDAFLQCVQCLAVYHVEPEELEGVARVVSCSACLHEWYATEDDLIWGDEQANAALAIAAE--------QSDGTNPFIAARGV------------------EKKQQNGEDDGP--------------------------------INVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSDSAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEAKPRPH--TGKKTASRS 242
R +D A +++LQCV+C AVY VEPEELEG RVV CSACLHEWYA+E DL+WG+E+A +ALA A +S+G AA+GV EK + GE DG NVFVGNLSFRATEEDLYRAFSGYGAVL C++P+D +G RGY FVEM++R++ ++AIE LQGTSI+GRDVSL+EA+PR KK SR+
Sbjct: 68 RNSDTA----ESYLQCVECAAVYVVEPEELEGAPRVVGCSACLHEWYASETDLLWGEEEALSALAAHASFEAKSKTVKSEGERAINAAKGVGTAMKKDVPAPAMTAKTAEKNKPGGEKDGAPEAAVLSKDPTRDSPGENRSSTSKQEADKEGHFNVFVGNLSFRATEEDLYRAFSGYGAVLRCQVPADQSGASRGYGFVEMRTRESALKAIESLQGTSIMGRDVSLNEARPRKEGFVAKKQQSRT 308
BLAST of Ggra11139.t1 vs. uniprot
Match: A0A7S0ZBM5 (Hypothetical protein (Fragment) n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBM5_9RHOD) HSP 1 Score: 114 bits (286), Expect = 1.800e-25 Identity = 71/201 (35.32%), Postives = 95/201 (47.26%), Query Frame = 0
Query: 63 AAVSQDAFLQCVQCLAVYHVEPEELEG------------------------VARVVSCSACLHEWYATEDDLIWGDEQANAAL--------AIAAEQSDGTNPFIAARGVEKKQQNGEDDGPINVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSDSAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEAKPR 231
+A D FLQC +C AVY E EELE R+V CSAC+HEW+ ++ DLI GD+ A AL +AA+ ++P + P+ +F NL+FR TE +L AF YG V+ E+P D G RG+ F+EM R G +AI L G + GR + LS A PR
Sbjct: 314 SAGKPDTFLQCPECGAVYIFEREELENDPLYPVTESISLSDSTSSITPNSRPERIVRCSACIHEWFVSQRDLILGDDAAIKALEKSARSPSCVAAQMKSRSSPIALPK-----------PDPMTIFARNLAFRVTEVELREAFGAYGRVVRVEIPCDRFGQSRGFGFIEMADRADGEQAILALNGVVLSGRTIELSVALPR 503
BLAST of Ggra11139.t1 vs. uniprot
Match: M2Y9A5 (RNA recognition motif (RRM)-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y9A5_GALSU) HSP 1 Score: 107 bits (268), Expect = 9.800e-24 Identity = 68/186 (36.56%), Postives = 97/186 (52.15%), Query Frame = 0
Query: 68 DAFLQCVQCLAVYHVEPEELEGVARVVSCSACLHEWYATEDDLIWGDEQANAALAIAAEQSDGTNPFIAARGVEKKQQ--------------NGED-----------DGPINVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSDSAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEA 228
+ F+QC +C +Y V+ EELE R V C CLHEW ATEDDL+ D +L + E+ N VEK + GED +G +FVGNLS++A+E+DL+R FS G V + +P + + + RG+AF+ M A A++ LQG +IVGR + LSE+
Sbjct: 93 ETFIQCPECGTIYSVQVEELES-QRAVRCGDCLHEWLATEDDLLEIDPVYVNSLLLEREEQIKENGSFGKWQVEKDSKVLSSLQDADSTEALQGEDLKKKAAQSRKREGEKVLFVGNLSYKASEKDLFRVFSSCGQVFDVRIPRNHSKVHRGFAFIRMNLTGAST-ALQSLQGANIVGRPIVLSES 276
BLAST of Ggra11139.t1 vs. uniprot
Match: A0A7S0BLP8 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLP8_9RHOD) HSP 1 Score: 102 bits (255), Expect = 1.690e-23 Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0
Query: 99 CLHEWYATEDDLIWGDEQANAALAIAAEQSDGTNPFIAARGVEKKQQNGEDDGPINVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSDSAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEA 228
CLHEW A E ++IWG++ A ++ A E+ P + ++ D+ ++VFVG L++ TE+DL+ AF +G + C++P AG PRG FVE +++ +RAIE L G SI+GR +SLS A
Sbjct: 2 CLHEWRAFEKEIIWGEDAAIKSIKDAPERPLRRRP--------RSRRTSRDENALSVFVGGLAYSCTEDDLFAAFCSFGEISRCQIPQ-KAGTPRGIGFVEFRNKDNAIRAIETLDGASILGRKISLSVA 122
BLAST of Ggra11139.t1 vs. uniprot
Match: A0A5M6D887 (RNA-binding protein n=1 Tax=Roseiconus nitratireducens TaxID=2605748 RepID=A0A5M6D887_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 4.460e-17 Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 0
Query: 153 INVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSD-SAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEAKPRPHTGK 236
+N++VGNLSF ATE D+ AF +GAV + + D G RG+ FVEMQ+R++GM AI + SI GRDV+++EAKPR G+
Sbjct: 1 MNIYVGNLSFDATENDIEAAFGEFGAVKSVNVIKDRETGRSRGFGFVEMQNRESGMEAISAIDQKSICGRDVTVNEAKPRAERGR 85
BLAST of Ggra11139.t1 vs. uniprot
Match: A0A367Q3C1 (RNA-binding protein n=10 Tax=Nostocales TaxID=1161 RepID=A0A367Q3C1_9NOSO) HSP 1 Score: 82.4 bits (202), Expect = 1.790e-16 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 0
Query: 153 INVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSD-SAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEAKPR 231
++++VGNLS++ TEEDL RAF+ YG V +LP+D G PRG+AFVEM++ AIE L G +GRD+ +++AKPR
Sbjct: 1 MSIYVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVEMETEAQETAAIEALDGAEWMGRDLKVNKAKPR 80
BLAST of Ggra11139.t1 vs. uniprot
Match: A0A2S6CUU0 (RNA-binding protein n=1 Tax=Cuspidothrix issatschenkoi CHARLIE-1 TaxID=2052836 RepID=A0A2S6CUU0_9CYAN) HSP 1 Score: 82.4 bits (202), Expect = 2.220e-16 Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 0
Query: 153 INVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSD-SAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEAKPRPHTG 235
++++VGNLS++ TEEDL RAF+ YG V +LP+D G PRG+AFVEM AIE L G +GRD+ +++AKPR G
Sbjct: 1 MSIYVGNLSYQVTEEDLKRAFAEYGTVSRVQLPTDRETGRPRGFAFVEMSQEAEETAAIEALDGAEWMGRDLRVNKAKPREDRG 84
BLAST of Ggra11139.t1 vs. uniprot
Match: A0A7C3PDV1 (RNA-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3PDV1_9DELT) HSP 1 Score: 82.0 bits (201), Expect = 2.780e-16 Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 0
Query: 153 INVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSDS-AGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEAKPRPHTGK 236
+N++VGNLSF A+EEDL + FSG+G V + + D +G PRG+ F+EM R AIE L G ++GR +++SEA+PR G+
Sbjct: 1 MNIYVGNLSFDASEEDLQKLFSGFGQVSSVTIVRDKYSGQPRGFGFIEMPERSEAQAAIESLNGKELLGRSINVSEARPRTDRGR 85
BLAST of Ggra11139.t1 vs. uniprot
Match: A0A1Z4UJR6 (RNA-binding region RNP-1 n=6 Tax=Sphaerospermopsis TaxID=752201 RepID=A0A1Z4UJR6_9CYAN) HSP 1 Score: 82.0 bits (201), Expect = 3.020e-16 Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 0
Query: 153 INVFVGNLSFRATEEDLYRAFSGYGAVLNCELPSD-SAGLPRGYAFVEMQSRQAGMRAIECLQGTSIVGRDVSLSEAKPRPHTG 235
++++VGNLS++ T EDL AF+ YG V N +LP+D G PRG+AFVEM S AIE L G +GRD+ +++AKPR G
Sbjct: 1 MSIYVGNLSYQVTAEDLKLAFAEYGTVSNVQLPTDRETGRPRGFAFVEMSSEAEEKAAIEALDGAEWMGRDLKVNKAKPREERG 84 The following BLAST results are available for this feature:
BLAST of Ggra11139.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra11139.t1 ID=Ggra11139.t1|Name=Ggra11139.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=266bpback to top |