Ggra11132.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra11132.t1
Unique NameGgra11132.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length266
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000110_piloncontigtig00000110_pilon:92190..92987 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11132Ggra11132Gracilaria gracilis GNS1m malegenetig00000110_pilon 92190..92987 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11132.t1.start1Ggra11132.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000110_pilon 92190..92192 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11132.t1.CDS1Ggra11132.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000110_pilon 92190..92987 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11132.t1.exon1Ggra11132.t1.exon1Gracilaria gracilis GNS1m maleexontig00000110_pilon 92190..92987 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11132.t1.stop1Ggra11132.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000110_pilon 92985..92987 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra11132.t1Ggra11132.t1Gracilaria gracilis GNS1m malepolypeptidetig00000110_pilon 92190..92987 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra11132.t1 ID=Ggra11132.t1|Name=Ggra11132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=266bp
MAMFLGVEIFFSVSISPIVRHSVVQQSCVRTLVANNSTFSDSIEAEAISF
KCKTVTSSDVQVMHGNYSLESGDIACAEQSAYSYSIGEERQVNWTDGVQS
CDFRICSWVFLRSDILFVSDPVSIDIEAGDSITTYPTNVSSMGITAQDVP
RISQRLMEMYSQGTIDQDEIRRRILLTSGRASCSFEGEQFDATRVSLVAI
VIICTVWISSLVLFAISLLLRNKIFFDLQDPVHWARFATGDANCTERDDP
HLEYRKENQVIHICE*
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spliced messenger RNA

>Ggra11132.t1 ID=Ggra11132.t1|Name=Ggra11132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=798bp|location=Sequence derived from alignment at tig00000110_pilon:92190..92987+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTATGTTTCTCGGTGTCGAAATCTTTTTCTCTGTGTCTATTTCACC
CATTGTGCGTCACTCCGTTGTGCAGCAAAGTTGCGTGAGAACGCTTGTGG
CAAACAACAGCACGTTCAGCGACTCGATTGAGGCGGAGGCCATCTCTTTC
AAATGCAAAACAGTGACGAGCTCGGATGTGCAAGTGATGCATGGCAACTA
CAGCTTGGAAAGCGGTGACATAGCGTGCGCAGAGCAGAGCGCGTATTCGT
ATAGCATTGGTGAGGAGCGCCAAGTGAATTGGACTGACGGTGTACAGAGT
TGCGACTTCCGGATATGTTCTTGGGTGTTTCTTCGCAGTGACATTCTGTT
CGTGAGCGATCCGGTGTCTATTGACATTGAAGCAGGTGATAGTATCACTA
CGTACCCGACGAATGTGTCCAGCATGGGTATAACTGCGCAAGATGTACCG
CGCATTTCACAAAGACTGATGGAGATGTACTCACAAGGCACCATTGATCA
GGATGAAATACGCCGGCGCATACTGCTCACTTCTGGCAGAGCATCATGCT
CGTTTGAAGGCGAGCAGTTTGACGCAACGCGTGTTTCACTCGTGGCCATC
GTCATAATCTGTACAGTTTGGATTTCGTCTCTGGTGCTGTTTGCCATTTC
TTTGTTGCTGAGAAACAAGATTTTCTTCGACTTGCAGGACCCTGTACATT
GGGCTCGTTTTGCAACAGGCGATGCTAACTGCACAGAAAGAGACGACCCG
CACTTGGAGTATCGGAAAGAGAACCAAGTGATTCATATTTGCGAGTAG
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protein sequence of Ggra11132.t1

>Ggra11132.t1 ID=Ggra11132.t1|Name=Ggra11132.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=266bp
MAMFLGVEIFFSVSISPIVRHSVVQQSCVRTLVANNSTFSDSIEAEAISF
KCKTVTSSDVQVMHGNYSLESGDIACAEQSAYSYSIGEERQVNWTDGVQS
CDFRICSWVFLRSDILFVSDPVSIDIEAGDSITTYPTNVSSMGITAQDVP
RISQRLMEMYSQGTIDQDEIRRRILLTSGRASCSFEGEQFDATRVSLVAI
VIICTVWISSLVLFAISLLLRNKIFFDLQDPVHWARFATGDANCTERDDP
HLEYRKENQVIHICE*
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mRNA from alignment at tig00000110_pilon:92190..92987+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra11132.t1 ID=Ggra11132.t1|Name=Ggra11132.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=798bp|location=Sequence derived from alignment at tig00000110_pilon:92190..92987+ (Gracilaria gracilis GNS1m male)
ATGGCTATGTTTCTCGGTGTCGAAATCTTTTTCTCTGTGTCTATTTCACC
CATTGTGCGTCACTCCGTTGTGCAGCAAAGTTGCGTGAGAACGCTTGTGG
CAAACAACAGCACGTTCAGCGACTCGATTGAGGCGGAGGCCATCTCTTTC
AAATGCAAAACAGTGACGAGCTCGGATGTGCAAGTGATGCATGGCAACTA
CAGCTTGGAAAGCGGTGACATAGCGTGCGCAGAGCAGAGCGCGTATTCGT
ATAGCATTGGTGAGGAGCGCCAAGTGAATTGGACTGACGGTGTACAGAGT
TGCGACTTCCGGATATGTTCTTGGGTGTTTCTTCGCAGTGACATTCTGTT
CGTGAGCGATCCGGTGTCTATTGACATTGAAGCAGGTGATAGTATCACTA
CGTACCCGACGAATGTGTCCAGCATGGGTATAACTGCGCAAGATGTACCG
CGCATTTCACAAAGACTGATGGAGATGTACTCACAAGGCACCATTGATCA
GGATGAAATACGCCGGCGCATACTGCTCACTTCTGGCAGAGCATCATGCT
CGTTTGAAGGCGAGCAGTTTGACGCAACGCGTGTTTCACTCGTGGCCATC
GTCATAATCTGTACAGTTTGGATTTCGTCTCTGGTGCTGTTTGCCATTTC
TTTGTTGCTGAGAAACAAGATTTTCTTCGACTTGCAGGACCCTGTACATT
GGGCTCGTTTTGCAACAGGCGATGCTAACTGCACAGAAAGAGACGACCCG
CACTTGGAGTATCGGAAAGAGAACCAAGTGATTCATATTTGCGAGTAG
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Coding sequence (CDS) from alignment at tig00000110_pilon:92190..92987+

>Ggra11132.t1 ID=Ggra11132.t1|Name=Ggra11132.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=798bp|location=Sequence derived from alignment at tig00000110_pilon:92190..92987+ (Gracilaria gracilis GNS1m male)
ATGGCTATGTTTCTCGGTGTCGAAATCTTTTTCTCTGTGTCTATTTCACC
CATTGTGCGTCACTCCGTTGTGCAGCAAAGTTGCGTGAGAACGCTTGTGG
CAAACAACAGCACGTTCAGCGACTCGATTGAGGCGGAGGCCATCTCTTTC
AAATGCAAAACAGTGACGAGCTCGGATGTGCAAGTGATGCATGGCAACTA
CAGCTTGGAAAGCGGTGACATAGCGTGCGCAGAGCAGAGCGCGTATTCGT
ATAGCATTGGTGAGGAGCGCCAAGTGAATTGGACTGACGGTGTACAGAGT
TGCGACTTCCGGATATGTTCTTGGGTGTTTCTTCGCAGTGACATTCTGTT
CGTGAGCGATCCGGTGTCTATTGACATTGAAGCAGGTGATAGTATCACTA
CGTACCCGACGAATGTGTCCAGCATGGGTATAACTGCGCAAGATGTACCG
CGCATTTCACAAAGACTGATGGAGATGTACTCACAAGGCACCATTGATCA
GGATGAAATACGCCGGCGCATACTGCTCACTTCTGGCAGAGCATCATGCT
CGTTTGAAGGCGAGCAGTTTGACGCAACGCGTGTTTCACTCGTGGCCATC
GTCATAATCTGTACAGTTTGGATTTCGTCTCTGGTGCTGTTTGCCATTTC
TTTGTTGCTGAGAAACAAGATTTTCTTCGACTTGCAGGACCCTGTACATT
GGGCTCGTTTTGCAACAGGCGATGCTAACTGCACAGAAAGAGACGACCCG
CACTTGGAGTATCGGAAAGAGAACCAAGTGATTCATATTTGCGAGTAG
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