Ggra9672.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9672.t1
Unique NameGgra9672.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length314
Homology
BLAST of Ggra9672.t1 vs. uniprot
Match: A0A2V3J4L9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4L9_9FLOR)

HSP 1 Score: 236 bits (603), Expect = 3.430e-73
Identity = 129/279 (46.24%), Postives = 182/279 (65.23%), Query Frame = 0
Query:   45 LPTTRLSPNVHEL---LTDDD-LLDEICD-SRNFAYFPVADLLVASIAKGGSTSVFQFLYEGITGEKDHSHSRCGTNVQDLHSDCWESRAVYLQNFTNEERRRILTSPSTIRMAIQRDPFDRILSAFNDKFACITKTFNVDL-GYSFIVPYTRELAGLPASPRKCMNISEYATALDLIRE------SLPVP-----LQQLDVHIRPQQLYFDYIPYDMVLDVSELSNSSLLHAIMDRLPFRDLVEDGIGHRHAVERAELMIPEDAARKLYRFAMESHMG 306
            LP+  + P    L   L DDD LL  I D +R+F Y P AD+L+A++AKGGSTS+FQ ++ G+TG   +S  +CG+ V ++HS CW ++A YL N +   RR++LT  +T+R+AIQR+P+DR+LSAF  KF C T  +  D+     +VP  R  A LP +   CMNISE+A ALD  R+      +LP       L++LD+HIRPQQ +F+YI Y +VLDV +LSN + L  ++ RLPF DLV DG+   HA +   L++PE AA +L+RFA+ES +G
Sbjct:   16 LPSASIVPGSARLTSPLADDDALLKLITDKNRDFVYIPSADILLATLAKGGSTSLFQCIFAGVTGVPRYSVKQCGSYVHNVHSPCWNNQATYLYNLSLPHRRKVLTGATTLRVAIQRNPYDRLLSAFKSKFTCNTTLYGTDVRNRESMVPTLRRQAALPLTQPNCMNISEFAEALDRCRQIVTSNRTLPFASKLKHLRKLDIHIRPQQFFFEYISYHIVLDVDDLSNVTNLTPLLRRLPFVDLVSDGVRQEHASKSYNLLVPELAAGQLHRFALESKVG 294          
BLAST of Ggra9672.t1 vs. uniprot
Match: A0A2V3ISN0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN0_9FLOR)

HSP 1 Score: 148 bits (374), Expect = 2.220e-38
Identity = 92/278 (33.09%), Postives = 146/278 (52.52%), Query Frame = 0
Query:   34 MHIKTHPQLTELPTTRLSPNVHEL------LTDDDLLDEICDSRNFAYFPVADLLVASIAKGGSTSVFQFLYEGITGEKDHSHSRCGTN-VQDLHSDCWESRAVYLQNFTNEERRRILTSPSTIRMAIQRDPFDRILSAFNDKFACITKTFNVDLGYSF-IVPYTRELAGLPASPRKCMNISEYATALDLIR---ESLPVPLQQLDVHIRPQQLYFDYIPYDMVLDVSELSNSSLLHAIMDRLPFRDLVEDGIGHRHAVERAELMIPEDAARKLYRFA 300
            +H  TH +   +P    SP +H L      LT  D+ D   D   F Y P   LL+ + AK  ST+++ +L+  I G +  S + C T  +Q     CW+ + ++  N +  ++  +L S S +R+AI RDPF R+LSA+  K AC +  F  D+      VP     AG+  +  +C++++ +A  LD +R   E     L+ L++H RPQ  YF  I YD+++D+S +SN+S+   I+ RL F  L +D     HA  +    IPE  A +L++FA
Sbjct:   78 LHFFTHTRC--IPLAHPSPALHSLQPYHSFLTAPDIFDATSD---FIYIPYGRLLITTTAKVASTALWTWLHPAIVGHR--SQNPCNTTYIQHFAHPCWQGKPIHPSNLSRHQKYSLLKSASVLRVAITRDPFQRLLSAWKSKVACDSHDFGTDVQDRVKFVPRLLRQAGMNRTQDQCLSLAGFAQVLDRLRIKAEQNRFDLRTLNIHFRPQLSYFSVIDYDIIMDISHVSNASVFAPILRRLQFPALADDQPAKMHASSQRLQAIPETTAVQLFKFA 348          
BLAST of Ggra9672.t1 vs. uniprot
Match: R7QUW9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUW9_CHOCR)

HSP 1 Score: 137 bits (345), Expect = 2.950e-34
Identity = 80/241 (33.20%), Postives = 134/241 (55.60%), Query Frame = 0
Query:   69 DSRNFAYFPVADLLVASIAKGGSTSVFQFLYEGITGEKDHSHSRCGTNVQDLHSDCWESRAVYLQNFTNEERRRILTSPSTIRMAIQRDPFDRILSAFNDKFACITKTFNVDLGYSFIVPYTRELAGL--PASPRK---CMNISEYATALDLIR---ESLPVPLQQLDVHIRPQQLYFDYIPYDMVLDVSELSNSSLLHAIMDRLPFRDLVEDGIGHRHAVERAELMIPEDAARKLYRFAM 301
            +  +FAY P + + + + +K GST+++ +L++G++G+      + G+ V +  + CW+ + ++  N T+ ER +IL  P  +R+AI R+PF+RILSA+  K AC +  F  D     +    R + G+   A  RK   C++I+ +A  LD +R   E     +  LD H RPQ+ +FD I Y  +LDVS L N + L  I+ R+PF +L+ +G     +   A   + E  A  LY+FA+
Sbjct:  106 EDSDFAYIPESKIFMTTTSKVGSTTLWTWLHKGLSGKSSDKECK-GSQVTNFQAPCWQGKVLHPHNMTDLERWKILNDPEVLRIAITRNPFERILSAWKSKAACESDDFGTD-----VRERDRLIPGMLRQAQMRKGASCLSITSFAEVLDKLRRMSERDDFDMTLLDKHFRPQEFHFDIINYQYILDVSMLDNVTALQPIVRRMPFPELLTEGPTKLSSSRPAYQTLSEPTAALLYKFAI 340          
BLAST of Ggra9672.t1 vs. uniprot
Match: A0A7S0QSV2 (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QSV2_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 2.310e-20
Identity = 78/278 (28.06%), Postives = 122/278 (43.88%), Query Frame = 0
Query:   75 YFPVADLLVASIAKGGSTSVFQFLYEGITGEKDHS------------HSRCGTNVQDLHSDCWESRAVYLQNFTNEERRRILTSPSTIRMAIQRDPFDRILSAFNDKFACITKTFNVDLGYSFIVPYTRELAGL------------------PASPRK--------------------CMNISEYATALDLIRESLPVPLQQLDVHIRPQQLYFDYIPYDMVLDVSELSNSSLLHAIMDRLPFRDLVEDGIG--HRHAVERAELMIPEDAARKLYRFA 300
            Y P ADL++    KGG+TS+F ++Y G+ G ++H                C   VQ     CW+ R ++      +  +  L + +T ++AI RDP+DR+LSA+  K AC       D     I  Y R L GL                  P +P +                    C+++ +Y  ALDLIR       ++++ H RPQ  +FD I YD  L+++ LS++  L  I + L F       I   H+ A    +L +P +  +KL +FA
Sbjct:   35 YIPEADLVICIAPKGGTTSLFNWIYRGMFG-REHGLPGDPDPPGVPWDQNCKFGVQHFEEPCWKGRVIHYNQSGVQANKWRLKNAAT-KVAIFRDPYDRLLSAYKSKIACD------DGALIDIEGYARGLLGLAGLNTSALAWTKYGPSCRPGNPCEGGLRQEMTNLYGPLWHYGYPCLSMHDYVRALDLIRTKHRA--REINAHFRPQDCFFDQIDYDYHLNITGLSSAQALRPIAESLHFSAANAQPIPIMHQTAPGTVKLWMPPEDQKKLTQFA 302          
The following BLAST results are available for this feature:
BLAST of Ggra9672.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J4L93.430e-7346.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISN02.220e-3833.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUW92.950e-3433.20Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0QSV22.310e-2028.06Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 72..236
e-value: 6.8E-8
score: 33.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000107_piloncontigtig00000107_pilon:76051..76992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9672.t1Ggra9672.t1Gracilaria gracilis GNS1m malemRNAtig00000107_pilon 76051..76992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9672.t1 ID=Ggra9672.t1|Name=Ggra9672.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=314bp
MFNALVPSQAPGCKTYTILLMSALLLTVPLVTLMHIKTHPQLTELPTTRL
SPNVHELLTDDDLLDEICDSRNFAYFPVADLLVASIAKGGSTSVFQFLYE
GITGEKDHSHSRCGTNVQDLHSDCWESRAVYLQNFTNEERRRILTSPSTI
RMAIQRDPFDRILSAFNDKFACITKTFNVDLGYSFIVPYTRELAGLPASP
RKCMNISEYATALDLIRESLPVPLQQLDVHIRPQQLYFDYIPYDMVLDVS
ELSNSSLLHAIMDRLPFRDLVEDGIGHRHAVERAELMIPEDAARKLYRFA
MESHMGERRHLLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase