Ggra7518.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7518.t1
Unique NameGgra7518.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length369
Homology
BLAST of Ggra7518.t1 vs. uniprot
Match: A0A2V3IQ30 (Glycerophosphodiester phosphodiesterase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ30_9FLOR)

HSP 1 Score: 501 bits (1291), Expect = 4.670e-175
Identity = 264/403 (65.51%), Postives = 314/403 (77.92%), Query Frame = 0
Query:    1 MRRAAQNDPSSTKPLFSV-DXXXXXXXXXXXXXXXXXXXXSFFRNAA----------------------------------VTLLPGGWRVALCTANLLPAPSLRPGENITLIAHRGCEFPYPENSIHALRFGARQLGYVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKSCFTEGLPVSSPKCTNCSVLMKATKDLMQRFAVLPEHVVFTSTEHASLQVFQKGIPKSTFAISLDQTYSHYKRSTFTELISRGKYEFAAMYYGLVAVRPDFVRLMRAEKVKGVGRPGDVFAWTIRKDLDYRLARCAGVSKMIVAEPHRVKKSFTSGNIAEWLAENV 368
            MRRA Q D S T P+FSV D  XXXXXXXXXXXXXXXXXXSFFRN++                                  V +LPGGWRVALC +NLLP P+LRPGENIT I HRGCEFPYPENS+HALR GA++ G+VELD+ LTSDG VV MHDQTLDRTTNGTG  CT+S +Y+KQLEL MPTRDP GR+AQGKFCS  S RG T PCTYRVPTLE+IFD+LP  TRFM+D+K C+ +GLP + PKC+NCS+LM+ T+DLM+++A+ PE V+FTS   ASL+VFQ GIP+S +AIS+DQ YSHYKRS+F EL+++G Y++AAM+YGL AVRPDFV++MR E+ KGVG+ GDVFAWTIRKDLDYRLARCAG+SKMIVAEPHRVK  FT  N+AEW  E++
Sbjct:    1 MRRATQPDQSVTTPIFSVADEDXXXXXXXXXXXXXXXXXXSFFRNSSENRSSAFRFLRRINRFLFFAFPRVLVILVLVVVTVAMLPGGWRVALCASNLLPPPTLRPGENITFIGHRGCEFPYPENSLHALRVGAKEAGFVELDVALTSDGTVVLMHDQTLDRTTNGTGTTCTRSTQYVKQLELQMPTRDPLGRMAQGKFCSFPSPRGTTTPCTYRVPTLEQIFDDLPHHTRFMIDVKECYADGLPDTVPKCSNCSLLMQTTRDLMEKYAISPERVIFTSKLPASLRVFQDGIPRSKYAISMDQGYSHYKRSSFRELMTKGAYDYAAMHYGLAAVRPDFVQIMRTERTKGVGQMGDVFAWTIRKDLDYRLARCAGISKMIVAEPHRVKNRFTL-NVAEWFGESL 402          
BLAST of Ggra7518.t1 vs. uniprot
Match: R7QLS6 (GP-PDE domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLS6_CHOCR)

HSP 1 Score: 393 bits (1010), Expect = 3.440e-132
Identity = 181/306 (59.15%), Postives = 236/306 (77.12%), Query Frame = 0
Query:   47 VTLLPGGWRVALCTANLLPAPSLRPGENITLIAHRGCEFPYPENSIHALRFGARQLGYVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKSCFTEGLPVSSPKCTNCSVLMKATKDLMQRFAVLPEHVVFTSTEHASLQVFQKGIPKS-TFAISLDQTYSHYKRSTFTELISRGKYEFAAMYYGLVAVRPDFVRLMRAEKVKGVGRPGDVFAWTIRKDLDYRLARCAGVSKMIVAEPHRV 351
            V +LPGGWRVALC AN+LP P++R GENITL+AHRGCEFPYPEN++H LR+GA+ + +VELDI+LTSDG VVAMHD  LDRTTNGTG+ C + L+Y+K L + MP RDPRG+IAQGKFCS  +  G +VPCTYRVPTL EIFDELP+GT++MLD+K+C+  G+  +SP C+NC++L +ATK  M++  + PE VVFT+ + ASL+ FQ G+P   ++++ + Q+YSHYKR T    I    +  A++Y GL AVRPDFVR +R   +    +  DVFAWTIR+D D+RLARCAGV+ +IVAEP RV
Sbjct:   98 VAMLPGGWRVALCAANVLPPPAMRTGENITLVAHRGCEFPYPENTLHGLRYGAQLVRFVELDISLTSDGHVVAMHDDLLDRTTNGTGLTCERPLDYVKSLAVKMPERDPRGKIAQGKFCSDTTAGGQSVPCTYRVPTLNEIFDELPEGTKYMLDVKNCYAPGIEANSPHCSNCTMLREATKKAMEKNFIKPEQVVFTTQQVASLKAFQLGLPMGYSYSLGMGQSYSHYKRKTLMAKIEGDNFNTASLYVGLAAVRPDFVRQLRESSIPASMKHRDVFAWTIRRDFDFRLARCAGVTNLIVAEPMRV 403          
BLAST of Ggra7518.t1 vs. uniprot
Match: A0A4Y8LQC7 (Glycerophosphodiester phosphodiesterase n=2 Tax=Cohnella luojiensis TaxID=652876 RepID=A0A4Y8LQC7_9BACL)

HSP 1 Score: 95.5 bits (236), Expect = 1.020e-18
Identity = 87/290 (30.00%), Postives = 135/290 (46.55%), Query Frame = 0
Query:   73 ENITLI-AHRGCEFPYPENSIHALRFGAR-QLGYVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKSCFTEGLPVSSPKCTNCSVLMKATKDLMQRFAVLPEHVVFTSTEHASLQVFQKGIPKSTFAISLDQTYSHYKRSTFTELISRGKYEFAAMYYGLVAVRPDFVRLMRA--EKVKGVGRPGDVFAWTIRKDLDYRLARCAGVSKMIVAEPHRVKKSFTSG 358
            EN T+I AHRG     PEN++ + R G R Q  Y+E+D+ LT DG+++AMHD+T+DRTTNGTG++   +L  IK L+            A   F       G+      +VPTL+EIF+     TR++L+ K+   E  P    K      ++K  +D       L  H+   S    SL    K I K    + L Q + +   ++ +    R   E +    G+ A   +F+R+  +   KVK  G    ++ +T+   L+  +A   GV  +    P R+ K    G
Sbjct:   43 ENSTVIVAHRGASGYAPENTLDSYRIGVRMQADYIEIDLRLTKDGELIAMHDETVDRTTNGTGLIKNMTLTEIKALD------------AGSWFNDKNQAYGSEEYVNEKVPTLKEIFETFGKDTRYLLETKA--PEDYPGLEEK------MLKLVEDFG-----LTRHIAVQSISKESL----KKIRKRNKDVPLFQLFWYKNPASISSARLR---EISGYANGIGA---NFLRIDESYVRKVKNAGLL--LYPYTVNYPLNMEMALRWGVDGVHTDYPDRLMKMIPEG 295          
BLAST of Ggra7518.t1 vs. uniprot
Match: A0A090YKX8 (Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Bacillus clarus TaxID=2338372 RepID=A0A090YKX8_9BACI)

HSP 1 Score: 94.7 bits (234), Expect = 1.610e-18
Identity = 86/277 (31.05%), Postives = 130/277 (46.93%), Query Frame = 0
Query:   78 IAHRGCEFPYPENSIHALRFGARQLG-YVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKSCFTEGLPVSSPKCTNCSVLMKATKDLMQRFAVLPEHVVFTSTEHASLQVFQKGIPKSTFAISLDQ--TYSHYKRSTFTELISRGKYEFAAMYYGLVAVRPDFVRLMRAEKVKGVGRPGDVFAWTIRKDLDYRLARCAGVSKMIVAEPHRV 351
            IAHRG     PE++I A + G +  G Y+E+D+ +T DG ++AMHD+TL+RTTNGTG+V   +LE IKQL+           +A+ +F + +            VPTLEEI +       + ++ KS      P   P+      + +   +++ R+ V  + V+  S    SL    K I     AI L Q  TY    R T  EL+S  KY       GL  +   +V     +K+K  G   +V  +T+ K+ D +     GV  M    P R+
Sbjct:   42 IAHRGASTCAPEHTIAAYKLGQQLKGDYIEIDLQMTKDGHLIAMHDETLNRTTNGTGLVKDHTLEEIKQLDTGSSFNKKNPSLAKEEFKNAK------------VPTLEEIIEAFGQDAHYYIETKS------PDEYPR------MEEKLLEILSRYQV-NDKVIIQSFSQESL----KKIHILNSAIPLVQLLTYKKTVRLTEAELVSYSKY-----CIGL-GMNYKYVDAAYVQKIKQYGL--EVHPFTVDKEEDMKKLIEWGVDGMFTNYPDRL 281          
BLAST of Ggra7518.t1 vs. uniprot
Match: A0A1B9AWF9 (Glycerophosphodiester phosphodiesterase n=4 Tax=Bacillaceae TaxID=186817 RepID=A0A1B9AWF9_9BACI)

HSP 1 Score: 94.7 bits (234), Expect = 1.840e-18
Identity = 60/168 (35.71%), Postives = 93/168 (55.36%), Query Frame = 0
Query:   40 SFFRN---AAVTLLPGGWRVALCTANLLPAPSLRPGENITLIAHRGCEFPYPENSIHALRFGARQLG-YVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKS 203
            S FRN   +A  +  G   V+   A  L  PSL P + I  +AHRG     PE++I A + G +  G Y+E+D+ +T DG+++AMHD+TLDRTTNGTG+V   +L  IKQL+      +   + A+ ++  ++            VPTL+E+ +    G R+ ++ KS
Sbjct:    3 SIFRNVMMSAAIIGIGTGAVSQVQAAELIKPSLNPNK-ILNVAHRGASGHAPEHTIPAYKLGQQMKGDYIEIDLQMTKDGELIAMHDETLDRTTNGTGLVKDFTLAEIKQLDAGSWFNEKYPQYAKPEYVGLK------------VPTLQEVIETFGTGARYYIETKS 157          
BLAST of Ggra7518.t1 vs. uniprot
Match: A0A2N5I6T1 (Glycerophosphodiester phosphodiesterase n=1 Tax=Bacillus sp. M6-12 TaxID=2054166 RepID=A0A2N5I6T1_9BACI)

HSP 1 Score: 94.0 bits (232), Expect = 3.350e-18
Identity = 79/290 (27.24%), Postives = 136/290 (46.90%), Query Frame = 0
Query:   65 PAPSLRPGENITLIAHRGCEFPYPENSIHALRFGARQLG-YVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKSCFTEGLPVSSPKCTNCSVLMKATKDLMQRFAVLPEHVVFTSTEHASLQVFQKGIPKSTFAISLDQTYSHYKRSTFTELISRGKYEFAAMYYGLVAVRPDFVRLMRAEKVKGVGRPGDVFAWTIRKDLDYRLARCAGVSKMIVAEPHRVKK 353
            PA   +    +  I+HRG     PE+++ A   G +  G Y+E+D+ +T DG+++AMHD+TLDRTTNGTG+V   +LE IKQL+      +    +A+ ++  ++            VPTL+E+ +    G R+ ++ KS   E  P    K      L++  K          + V+  S    SL++  +  PK    I L Q   + + +T T+    G  E++      V +  D +     +KV+  G   ++  +TI +  D R     GV+ +    P R+++
Sbjct:   30 PADPSQNKHKVLNISHRGASGHAPEHTLLAYELGEKMKGDYIEVDLQMTKDGELIAMHDETLDRTTNGTGLVKDYTLEEIKQLDAGSWFNEKYPELAKEEYVGLK------------VPTLDEVIETFGQGDRYYIETKS--PEVYPGMEKK------LLEVLKKYNLTGKKASDKVLIQSFSSDSLRIVHELDPK----IPLVQLLWYDQPATITDAELNGYKEYSIG----VGMNSDMIDKAYVQKVRQHGL--EIHPYTINEKEDMRKLIDWGVTGLFTNFPDRLQE 289          
BLAST of Ggra7518.t1 vs. uniprot
Match: A0A6I7F0V9 (Glycerophosphodiester phosphodiesterase n=2 Tax=Bacillus TaxID=1386 RepID=A0A6I7F0V9_9BACI)

HSP 1 Score: 94.0 bits (232), Expect = 3.460e-18
Identity = 57/166 (34.34%), Postives = 88/166 (53.01%), Query Frame = 0
Query:   41 FFRNAAVT--LLPGGWRVALCTANLLPAPSLRPGENITLIAHRGCEFPYPENSIHALRFGARQLG-YVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKS 203
            FFR+AA+T  L+  G+   +      PA       +I  +AHRG     PE+++ A   G +  G Y+E+D+ +T DG++VAMHD+TLDRTTNGTG V   +LE IK+L+      +    +A+  +  ++            VPTLEE+        R+ ++ KS
Sbjct:    4 FFRSAAMTAALIGAGFGAGIHAEAAAPAHKQLNPNHILNVAHRGASGHAPEHTLLAYELGQKMKGDYIEIDLQMTKDGELVAMHDETLDRTTNGTGYVKDYTLEEIKKLDAGSWFNEKYPELAKPVYAGLK------------VPTLEEVIQRFGKSARYYIETKS 157          
BLAST of Ggra7518.t1 vs. uniprot
Match: glycerophosphodiester phosphodiesterase n=1 Tax=Alkalihalobacillus sp. TS-13 TaxID=2842455 RepID=UPI001C878C7D (glycerophosphodiester phosphodiesterase n=1 Tax=Alkalihalobacillus sp. TS-13 TaxID=2842455 RepID=UPI001C878C7D)

HSP 1 Score: 92.4 bits (228), Expect = 1.240e-17
Identity = 51/138 (36.96%), Postives = 82/138 (59.42%), Query Frame = 0
Query:   67 PSLRPGENITLIAHRGCEFPYPENSIHALRFGARQLG-YVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKS 203
            PSL P + I  +AHRG     PE+++ +   G +  G YVE+D+ +T DG+++AMHD+TLDRTTNGTG+V   +LE IKQL+      +   ++A+ ++  V+            VPTL+E+ ++    T + ++ KS
Sbjct:   35 PSLNPNQ-ILNVAHRGASGYAPEHTLPSYELGEKMKGDYVEVDLQMTKDGELIAMHDETLDRTTNGTGLVKDHTLEEIKQLDAGSWFNEKYPQMAKEEYAGVQ------------VPTLDEVIEKFGKSTNYYIETKS 159          
BLAST of Ggra7518.t1 vs. uniprot
Match: glycerophosphodiester phosphodiesterase n=1 Tax=Aquibacillus sediminis TaxID=2574734 RepID=UPI001486E1FC (glycerophosphodiester phosphodiesterase n=1 Tax=Aquibacillus sediminis TaxID=2574734 RepID=UPI001486E1FC)

HSP 1 Score: 92.0 bits (227), Expect = 1.260e-17
Identity = 54/137 (39.42%), Postives = 82/137 (59.85%), Query Frame = 0
Query:   69 LRPGENITLIAHRGCEFPYPENSIHALRFGARQLG--YVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKS 203
            L P E++ +IAHRG     PE++I A +  A+Q+G  Y+E+D+ +T DG VVAMHD+T+DRTTNG+G V + +LE +KQLE+          + +G   +  S           +PTLEEI     D T++ +++KS
Sbjct:   25 LLPKESVQVIAHRGASAYMPEHTIPAYQL-AQQMGADYIEIDVQMTKDGHVVAMHDETVDRTTNGSGDVSSFTLEQVKQLEV----------VVEGNLPNADST-------DITIPTLEEILYYFGDETKYYIELKS 143          
BLAST of Ggra7518.t1 vs. uniprot
Match: A0A3D9IYU2 (Glycerophosphoryl diester phosphodiesterase n=2 Tax=Cohnella lupini TaxID=1294267 RepID=A0A3D9IYU2_9BACL)

HSP 1 Score: 92.4 bits (228), Expect = 2.080e-17
Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   73 ENITLIAHRGCEFPYPENSIHALRFGAR-QLGYVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNMPTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLDIKS 203
              IT++AHRG     PEN++ A R   R +  Y+E+D+ +T DG+++AMHD T+DRTTNGTG V   +L  IK L+      D     A+ K+ + +            VPTL E+F+     TR++L+ KS
Sbjct:   62 SKITIVAHRGASGYAPENTLDAYRLAVRMRADYIEIDLQMTEDGELIAMHDGTVDRTTNGTGFVRNMTLSEIKSLDSGSWFNDKHSFYARKKYINEK------------VPTLREVFEAFGPSTRYLLETKS 181          
The following BLAST results are available for this feature:
BLAST of Ggra7518.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ304.670e-17565.51Glycerophosphodiester phosphodiesterase 1 n=1 Tax=... [more]
R7QLS63.440e-13259.15GP-PDE domain-containing protein n=1 Tax=Chondrus ... [more]
A0A4Y8LQC71.020e-1830.00Glycerophosphodiester phosphodiesterase n=2 Tax=Co... [more]
A0A090YKX81.610e-1831.05Glycerophosphoryl diester phosphodiesterase family... [more]
A0A1B9AWF91.840e-1835.71Glycerophosphodiester phosphodiesterase n=4 Tax=Ba... [more]
A0A2N5I6T13.350e-1827.24Glycerophosphodiester phosphodiesterase n=1 Tax=Ba... [more]
A0A6I7F0V93.460e-1834.34Glycerophosphodiester phosphodiesterase n=2 Tax=Ba... [more]
glycerophosphodiester phosphodiesterase n=1 Tax=Alkalihalobacillus sp. TS-13 TaxID=2842455 RepID=UPI001C878C7D1.240e-1736.96glycerophosphodiester phosphodiesterase n=1 Tax=Al... [more]
glycerophosphodiester phosphodiesterase n=1 Tax=Aquibacillus sediminis TaxID=2574734 RepID=UPI001486E1FC1.260e-1739.42glycerophosphodiester phosphodiesterase n=1 Tax=Aq... [more]
A0A3D9IYU22.080e-1737.88Glycerophosphoryl diester phosphodiesterase n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR030395Glycerophosphodiester phosphodiesterase domainPFAMPF03009GDPDcoord: 80..345
e-value: 8.5E-22
score: 78.1
IPR030395Glycerophosphodiester phosphodiesterase domainPROSITEPS51704GP_PDEcoord: 75..355
score: 20.630802
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilyGENE3D3.20.20.190Phosphatidylinositol (PI) phosphodiesterasecoord: 68..357
e-value: 3.7E-41
score: 143.2
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamilySUPERFAMILY51695PLC-like phosphodiesterasescoord: 75..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR46211GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASEcoord: 73..356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:259081..260289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7518.t1Ggra7518.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 259081..260289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7518.t1 ID=Ggra7518.t1|Name=Ggra7518.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=369bp
MRRAAQNDPSSTKPLFSVDDEEEELFTHHAPPPPPPSRKSFFRNAAVTLL
PGGWRVALCTANLLPAPSLRPGENITLIAHRGCEFPYPENSIHALRFGAR
QLGYVELDITLTSDGKVVAMHDQTLDRTTNGTGIVCTKSLEYIKQLELNM
PTRDPRGRIAQGKFCSVRSRRGNTVPCTYRVPTLEEIFDELPDGTRFMLD
IKSCFTEGLPVSSPKCTNCSVLMKATKDLMQRFAVLPEHVVFTSTEHASL
QVFQKGIPKSTFAISLDQTYSHYKRSTFTELISRGKYEFAAMYYGLVAVR
PDFVRLMRAEKVKGVGRPGDVFAWTIRKDLDYRLARCAGVSKMIVAEPHR
VKKSFTSGNIAEWLAENV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR030395GP_PDE_dom
IPR017946PLC-like_Pdiesterase_TIM-brl