Ggra5389.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5389.t1
Unique NameGgra5389.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length312
Homology
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BLAST of Ggra5389.t1 vs. uniprot
Match: A0A2V3ISU4 (B-block_TFIIIC domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISU4_9FLOR)

HSP 1 Score: 158 bits (400), Expect = 1.100e-39
Identity = 91/241 (37.76%), Postives = 135/241 (56.02%), Query Frame = 0 
Query:   63 EKQLLYARYRMKNPIPPWIRERGNKLHRQSSSPESLEKEFIGDHKCIFHLSSKAAEVEGCYFKAGIPTLGKRQGFSSMIQTGDDGPEALKARKTDPEQCASNLEGKGKEKEECKSAKDEEKDKARSKATDKTKDIDKGRAKFQENDDGEVDVEQMIRVCRAIIRSRAIAYCCNNTKALEWRTVTNWISWYVRTKLEEEMGIHQTVLMSVKSLVNAMVKFCDIAMMRSALDSLALKVVIQGQ 303
            EK L+Y+RYR KNP+P WIRER  KL RQ  +PE +E EF GD+ CI HLSS+A+EVEG   + GIP LGKR    +  +  ++  +  K RK    Q  +                                    G AK   +D   V+ ++M+ VC+A+++SRA+AY C N++ALEW+   N I+W+VR   ++++    ++L  + +L  AMV FCD+ ++R  LD ++LKVVI G+
Sbjct: 1076 EKLLMYSRYRTKNPMPTWIREREQKLQRQDYTPEKVEDEFAGDYSCILHLSSRASEVEGRLVRVGIPLLGKRPSTETTPKNENESKKTPKLRKKSSIQSFA------------------------------------GTAK---SDQFFVEGQRMVMVCKALVKSRAMAYYCRNSEALEWKGAVNMINWFVRKFYKDQVKKDSSLLEVLSALAKAMVSFCDMFIVRRVLDIISLKVVIHGR 1277
The following BLAST results are available for this feature:
BLAST of Ggra5389.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISU41.100e-3937.76B-block_TFIIIC domain-containing protein n=1 Tax=G... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000099_piloncontigtig00000099_pilon:112280..113215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5389.t1Ggra5389.t1Gracilaria gracilis GNS1m malemRNAtig00000099_pilon 112280..113215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5389.t1 ID=Ggra5389.t1|Name=Ggra5389.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=312bp
MNRCLAVQWCTARAQFAKHSDHHLFCGPPLETVQHRRTRRSFREIQEQNS
FFASNPEVYAVDEKQLLYARYRMKNPIPPWIRERGNKLHRQSSSPESLEK
EFIGDHKCIFHLSSKAAEVEGCYFKAGIPTLGKRQGFSSMIQTGDDGPEA
LKARKTDPEQCASNLEGKGKEKEECKSAKDEEKDKARSKATDKTKDIDKG
RAKFQENDDGEVDVEQMIRVCRAIIRSRAIAYCCNNTKALEWRTVTNWIS
WYVRTKLEEEMGIHQTVLMSVKSLVNAMVKFCDIAMMRSALDSLALKVVI
QGQISERFSFM*
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