Ggra7703.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7703.t1
Unique NameGgra7703.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length232
Homology
BLAST of Ggra7703.t1 vs. uniprot
Match: A0A2V3IZV8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZV8_9FLOR)

HSP 1 Score: 206 bits (523), Expect = 1.210e-62
Identity = 122/206 (59.22%), Postives = 139/206 (67.48%), Query Frame = 0
Query:   21 VTDMAFVSSPFRLLPAPPPNRLKSSRRSHPHHWRSALKSPQEPVKPRFRRDEPGP----QTTFFPGNVAPTNNPGATPNERVLDQVRQTMTRLGIREDANSAPPPTFSPIDISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHPLDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGRVSGEFERSD 222
            + +M   + P  L   P  N  K SR S     R+AL+ PQEP KPRF RD   P    QT+FFP       +   TPN+RVL QVR TM RLG+ E   +  P  FSPIDIS VNPFS L+GA GAA ISY  W+AL + A FFASHPLD+QIYVVQRLSA+VRTGLVCL ALGSGISGVTSLGLFLL  RTAYG +SGEF  S+
Sbjct:   66 IMNMTAFAIPSFLQTHPYHNTPKLSR-STTVRIRAALRPPQEPTKPRFLRDADDPSIQTQTSFFPEKSQQQTS--QTPNKRVLQQVRDTMQRLGVEEHPQTPSPRPFSPIDISSVNPFSPLVGAFGAAFISYAVWSALGYIAFFFASHPLDDQIYVVQRLSAVVRTGLVCLFALGSGISGVTSLGLFLLFGRTAYGTLSGEFRNSN 268          
BLAST of Ggra7703.t1 vs. uniprot
Match: A0A6T5WSR9 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A6T5WSR9_9RHOD)

HSP 1 Score: 85.9 bits (211), Expect = 9.640e-17
Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   67 RFRRDEPG---PQTTFFPGNVAPTNNPGATPNERVLDQVRQTMTRLGIR-EDANSAPPPTFSPIDISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFAS--HPLDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGR 213
            RFR  E     P+T+F P          AT NE +  ++ +T  RLG++ E +   PPP  + ID++ V+P  AL G+A  A +    W A      FF +  +P    IYVVQRLSA++RT L+ + AL SGISG  +LGL  L+ ++A  R
Sbjct:   69 RFRAAESADAVPRTSFLPPRANDGGERPATANEIMQSEIEETARRLGVQTEPSRPRPPP--AKIDVATVDPLQALAGSAIGAVMFVLIWGATSSLMNFFQNDPNPFHNDIYVVQRLSAVIRTVLLTVFALLSGISGAATLGLLALAVKSAAAR 219          
BLAST of Ggra7703.t1 vs. uniprot
Match: A0A7S0ZC87 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZC87_9RHOD)

HSP 1 Score: 84.7 bits (208), Expect = 2.250e-16
Identity = 49/131 (37.40%), Postives = 81/131 (61.83%), Query Frame = 0
Query:   89 NPGATPNERVLDQVRQTMTRLGIREDANSAPPPTFSP--IDISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHP--LDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGRVS 215
            N   T N+  L+ + +T +RLGI + +N+AP P   P  ID++ V+PF A +G+ GA  +    W+ L +   ++  HP   +  +YVVQR+SA++RT L+ + +L SGI+G+T+ GLF+L  ++   R S
Sbjct:   83 NKPRTANDVALEDIAETASRLGI-DTSNTAPKPRPIPKRIDVASVDPFQAWIGSVGAGVMFVVFWSILNYLMKYYEVHPDPFESSVYVVQRISAVMRTVLLTVFSLMSGITGITTGGLFILGIKSMSARYS 212          
BLAST of Ggra7703.t1 vs. uniprot
Match: A0A7S1T8Z3 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T8Z3_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 1.220e-15
Identity = 62/170 (36.47%), Postives = 91/170 (53.53%), Query Frame = 0
Query:   62 EPVKPRFR-RDEPGPQTTFFPGNVAPTNNPGAT--PNERVLDQVRQTMTRLGIREDANSAPPPTFSPIDISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHPLDE-QIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGRVSGEFERSDKQSSN 227
            E   PRFR RDE     T    N  P   PG      E++L+ + +T+  L      N  P P+   +D+S V+  +AL+G   A A+    W+       F++S+P     +Y+VQRLSA+ RT ++   ALGSG++G+T LGL  LS R A+G + GEF+    QSS+
Sbjct:   76 ERAGPRFRVRDEGVETRTTLRKN--PETVPGGRRFATEKLLEDIDRTLASL---PGGNKTPRPS-KLVDLSTVHAGNALVGGLTAVAMFVALWSITQNLMTFYSSNPTSSGDLYIVQRLSAVARTVVITTFALGSGLAGMTGLGLLALSFRVAFGHIRGEFKPLHTQSSD 239          
BLAST of Ggra7703.t1 vs. uniprot
Match: A0A1Z5JL82 (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JL82_FISSO)

HSP 1 Score: 76.6 bits (187), Expect = 3.420e-13
Identity = 38/93 (40.86%), Postives = 58/93 (62.37%), Query Frame = 0
Query:  127 DISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHPLDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGRVSGEFE 219
            +++GVNP    +G   A A ++  W      A FFASHP++   YVV+RL+A+ R  ++ +++L +G  GVT LG+FLL  R AYG  +GE +
Sbjct:  120 NLNGVNPVVTTIGGVLALAAAFGLWTLTTTAAEFFASHPVNSDFYVVERLAAVFRNVVMGIISLATGFFGVTGLGIFLLGVRVAYGVATGELD 212          
BLAST of Ggra7703.t1 vs. uniprot
Match: D7FJR5 (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR5_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 4.080e-13
Identity = 43/100 (43.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:  127 DISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHPLDEQ-IYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGRVSGEFERSDKQS 225
            D++GVNPF A+LGA GAAA+S+ +W A ++ A  + S P +E  I  V R+++ ++  +V L ALG+GI GVT+LG+ +++A  A G   GE + S + S
Sbjct:  126 DLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELDPSPEAS 225          
BLAST of Ggra7703.t1 vs. uniprot
Match: A0A5J4YNA2 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNA2_PORPP)

HSP 1 Score: 74.7 bits (182), Expect = 2.200e-12
Identity = 49/133 (36.84%), Postives = 78/133 (58.65%), Query Frame = 0
Query:   93 TPNERVLDQVRQTMTRLGI-REDANSAPPPTFS---PIDISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHP--LDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGRVSGEFE 219
            T N+R+  ++R T  RLG+ +E  +SA   T S   PID+S ++P  ALLG+ G+  +   +W        +F   P      +YVV RLSA++RT ++   +LGSG++  T++GLFLL+ +T   RV+ + E
Sbjct:  139 TVNDRLEQEIRDTAARLGVEQETGSSAEKSTRSASTPIDLSTIDPAQALLGSFGSGIMFVISWTLTSNIMGYFEERPNVFGSDVYVVTRLSAVLRTVVLTTFSLGSGLTFCTTVGLFLLAVKTFSLRVAPKRE 271          
BLAST of Ggra7703.t1 vs. uniprot
Match: B8BRF8 (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRF8_THAPS)

HSP 1 Score: 73.6 bits (179), Expect = 6.450e-12
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 0
Query:  127 DISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHPLDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGRVSGEFE 219
            D++GVNP   + GAA A A +   W    +    FASHPL+  IY +QRL+ + R  ++ L +L SG  GV  +G+FLL  R AYG ++GE +
Sbjct:  155 DLNGVNPLVCIGGAAFAWACAGGLWFFTTYLGVLFASHPLETDIYFIQRLTGVFRNAVMGLSSLASGFFGVVGIGIFLLGIRVAYGVMTGELD 247          
BLAST of Ggra7703.t1 vs. uniprot
Match: K0SUY8 (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUY8_THAOC)

HSP 1 Score: 71.6 bits (174), Expect = 3.970e-11
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  127 DISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHPLDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSARTAYGRVSGEFE 219
            D++GVNP   + GA  + A +   W    F A  FA+HPLD  IY VQRL+ + R  ++ L +L SG  GV  +G+FLL  R AYG   GE +
Sbjct:  173 DLNGVNPLVCMGGATFSWACAGALWIFTQFLAQLFATHPLDTDIYFVQRLAQVFRNAVLGLSSLASGFFGVIGVGIFLLGLRVAYGVARGELD 265          
BLAST of Ggra7703.t1 vs. uniprot
Match: A0A7S4A5N5 (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5N5_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 8.160e-10
Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 0
Query:   66 PRFRRDEPG---PQTTFFPGNVAPTNNPGATPNERVLDQVRQTMTRLGIREDANSAPPPTFSPIDISGVNPFSALLGAAGAAAISYTAWNALVFTAAFFASHPLDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSLGLFLLSAR 208
            PRFRRD      P+    P   A       T N+++L ++ +   + G R +A          +DIS VNP  ++L    A A +Y  W A+ F A  FA HP+D +IY +QR+S ++RT ++ L  L +GI+    +GL  L  +
Sbjct:  109 PRFRRDAGAVDLPKDEEAPAEGAAMG----TINDKLLAEIEEA--KKGFRVEAPQVDER--EDVDISDVNPVQSVLSGVAALATAYVFWLAVGFAANSFAEHPVDSEIYAIQRISTVMRTVVLGLGTLLTGITAFAGVGLLALGGK 246          
The following BLAST results are available for this feature:
BLAST of Ggra7703.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IZV81.210e-6259.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6T5WSR99.640e-1738.56Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0ZC872.250e-1637.40Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1T8Z31.220e-1536.47Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1Z5JL823.420e-1340.86Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
D7FJR54.080e-1343.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5J4YNA22.200e-1236.84Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
B8BRF86.450e-1241.94Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K0SUY83.970e-1143.01Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
A0A7S4A5N58.160e-1032.88Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021434Protein of unknown function DUF3082PFAMPF11282DUF3082coord: 131..209
e-value: 2.6E-15
score: 56.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..231
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 163..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..162
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 183..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:104347..105042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7703.t1Ggra7703.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 104347..105042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7703.t1 ID=Ggra7703.t1|Name=Ggra7703.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=232bp
MEHLPSRPRPSPHPPSSPPEVTDMAFVSSPFRLLPAPPPNRLKSSRRSHP
HHWRSALKSPQEPVKPRFRRDEPGPQTTFFPGNVAPTNNPGATPNERVLD
QVRQTMTRLGIREDANSAPPPTFSPIDISGVNPFSALLGAAGAAAISYTA
WNALVFTAAFFASHPLDEQIYVVQRLSAIVRTGLVCLLALGSGISGVTSL
GLFLLSARTAYGRVSGEFERSDKQSSNVETQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021434DUF3082