Ggra7713.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7713.t1
Unique NameGgra7713.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length350
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:127412..128461 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7713Ggra7713Gracilaria gracilis GNS1m malegenetig00000088_pilon 127412..128461 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7713.t1.start1Ggra7713.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000088_pilon 127412..127414 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7713.t1.CDS1Ggra7713.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000088_pilon 127412..128461 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7713.t1.exon1Ggra7713.t1.exon1Gracilaria gracilis GNS1m maleexontig00000088_pilon 127412..128461 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7713.t1.stop1Ggra7713.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000088_pilon 128459..128461 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7713.t1Ggra7713.t1Gracilaria gracilis GNS1m malepolypeptidetig00000088_pilon 127412..128461 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7713.t1 ID=Ggra7713.t1|Name=Ggra7713.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=350bp
MKNVARSGFDISLKNSDNPICRASFRSAIITAPPPVYPIHVVPAIVFSGV
ALILQNANLLTEALLERHLLTPTSIERVSLNPLSRSVTAQNVTLKDASHQ
KLLHVEELSICLPSWRKLDISSPKSTLFTKIHGFDLSHNNWSSHFDNLAQ
KRQDWMISEPTPPLLSVGKQEAANTKMAWEITARISAIYVSMGTSKSDKP
LLPLIPLPSIALSSSKLNTFSEVVQVVQGLIGRAVREVGTKSFPREFRDS
ARRMARNLAVTAAEEFIVQAGAKVKELQERVGVVEDYVKDLPESEGVRTW
LGRTSDFLKTIDSLLSGDEEKSSQPTTSPSERENVPGYSPEQYRELDED*
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spliced messenger RNA

>Ggra7713.t1 ID=Ggra7713.t1|Name=Ggra7713.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00000088_pilon:127412..128461+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGAATGTCGCACGTTCAGGTTTTGATATTTCACTCAAGAATTCCGA
CAACCCGATTTGTAGAGCTTCTTTCCGCAGTGCCATCATCACTGCCCCCC
CACCGGTGTACCCAATTCATGTTGTACCCGCCATAGTGTTCTCCGGAGTC
GCTCTAATTTTGCAGAATGCAAATCTGCTAACAGAAGCCCTCCTTGAGAG
ACATTTACTCACGCCGACTTCAATTGAGCGAGTTTCTTTGAACCCTCTGA
GTCGCAGCGTAACCGCTCAAAATGTCACGTTGAAAGATGCATCGCATCAA
AAGCTACTGCACGTCGAAGAACTATCTATATGTCTTCCATCTTGGCGCAA
ACTAGACATATCTTCCCCGAAGTCTACGTTATTCACGAAGATCCATGGTT
TTGATCTATCTCACAATAACTGGTCCAGCCATTTCGACAACCTTGCGCAA
AAACGTCAAGATTGGATGATCTCTGAACCAACTCCCCCCTTGCTCTCCGT
TGGTAAGCAGGAAGCCGCCAATACTAAGATGGCTTGGGAAATAACGGCCC
GTATTTCAGCTATATATGTGTCCATGGGTACCTCCAAAAGCGATAAGCCA
TTGTTGCCACTAATCCCACTCCCCTCAATAGCTCTCAGCTCTTCCAAATT
GAATACTTTCTCCGAGGTTGTGCAAGTCGTTCAAGGATTGATCGGTCGTG
CAGTGCGTGAGGTAGGAACTAAATCGTTTCCCCGAGAGTTCCGAGATAGT
GCTAGACGCATGGCTCGCAACCTGGCCGTTACTGCCGCCGAGGAGTTTAT
TGTACAAGCTGGAGCAAAAGTTAAAGAGTTGCAAGAACGCGTGGGGGTTG
TTGAAGATTATGTCAAAGATTTGCCCGAGAGTGAGGGTGTTAGGACCTGG
CTTGGTCGCACTAGTGATTTCCTTAAGACTATCGACAGTTTACTCAGTGG
CGATGAGGAGAAGAGCTCACAACCAACAACGTCCCCAAGTGAAAGAGAGA
ATGTGCCCGGTTACTCTCCAGAGCAATACAGAGAACTCGATGAAGACTAA
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protein sequence of Ggra7713.t1

>Ggra7713.t1 ID=Ggra7713.t1|Name=Ggra7713.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=350bp
MKNVARSGFDISLKNSDNPICRASFRSAIITAPPPVYPIHVVPAIVFSGV
ALILQNANLLTEALLERHLLTPTSIERVSLNPLSRSVTAQNVTLKDASHQ
KLLHVEELSICLPSWRKLDISSPKSTLFTKIHGFDLSHNNWSSHFDNLAQ
KRQDWMISEPTPPLLSVGKQEAANTKMAWEITARISAIYVSMGTSKSDKP
LLPLIPLPSIALSSSKLNTFSEVVQVVQGLIGRAVREVGTKSFPREFRDS
ARRMARNLAVTAAEEFIVQAGAKVKELQERVGVVEDYVKDLPESEGVRTW
LGRTSDFLKTIDSLLSGDEEKSSQPTTSPSERENVPGYSPEQYRELDED*
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mRNA from alignment at tig00000088_pilon:127412..128461+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7713.t1 ID=Ggra7713.t1|Name=Ggra7713.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1050bp|location=Sequence derived from alignment at tig00000088_pilon:127412..128461+ (Gracilaria gracilis GNS1m male)
ATGAAGAATGTCGCACGTTCAGGTTTTGATATTTCACTCAAGAATTCCGA
CAACCCGATTTGTAGAGCTTCTTTCCGCAGTGCCATCATCACTGCCCCCC
CACCGGTGTACCCAATTCATGTTGTACCCGCCATAGTGTTCTCCGGAGTC
GCTCTAATTTTGCAGAATGCAAATCTGCTAACAGAAGCCCTCCTTGAGAG
ACATTTACTCACGCCGACTTCAATTGAGCGAGTTTCTTTGAACCCTCTGA
GTCGCAGCGTAACCGCTCAAAATGTCACGTTGAAAGATGCATCGCATCAA
AAGCTACTGCACGTCGAAGAACTATCTATATGTCTTCCATCTTGGCGCAA
ACTAGACATATCTTCCCCGAAGTCTACGTTATTCACGAAGATCCATGGTT
TTGATCTATCTCACAATAACTGGTCCAGCCATTTCGACAACCTTGCGCAA
AAACGTCAAGATTGGATGATCTCTGAACCAACTCCCCCCTTGCTCTCCGT
TGGTAAGCAGGAAGCCGCCAATACTAAGATGGCTTGGGAAATAACGGCCC
GTATTTCAGCTATATATGTGTCCATGGGTACCTCCAAAAGCGATAAGCCA
TTGTTGCCACTAATCCCACTCCCCTCAATAGCTCTCAGCTCTTCCAAATT
GAATACTTTCTCCGAGGTTGTGCAAGTCGTTCAAGGATTGATCGGTCGTG
CAGTGCGTGAGGTAGGAACTAAATCGTTTCCCCGAGAGTTCCGAGATAGT
GCTAGACGCATGGCTCGCAACCTGGCCGTTACTGCCGCCGAGGAGTTTAT
TGTACAAGCTGGAGCAAAAGTTAAAGAGTTGCAAGAACGCGTGGGGGTTG
TTGAAGATTATGTCAAAGATTTGCCCGAGAGTGAGGGTGTTAGGACCTGG
CTTGGTCGCACTAGTGATTTCCTTAAGACTATCGACAGTTTACTCAGTGG
CGATGAGGAGAAGAGCTCACAACCAACAACGTCCCCAAGTGAAAGAGAGA
ATGTGCCCGGTTACTCTCCAGAGCAATACAGAGAACTCGATGAAGACTAA
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Coding sequence (CDS) from alignment at tig00000088_pilon:127412..128461+

>Ggra7713.t1 ID=Ggra7713.t1|Name=Ggra7713.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1050bp|location=Sequence derived from alignment at tig00000088_pilon:127412..128461+ (Gracilaria gracilis GNS1m male)
ATGAAGAATGTCGCACGTTCAGGTTTTGATATTTCACTCAAGAATTCCGA
CAACCCGATTTGTAGAGCTTCTTTCCGCAGTGCCATCATCACTGCCCCCC
CACCGGTGTACCCAATTCATGTTGTACCCGCCATAGTGTTCTCCGGAGTC
GCTCTAATTTTGCAGAATGCAAATCTGCTAACAGAAGCCCTCCTTGAGAG
ACATTTACTCACGCCGACTTCAATTGAGCGAGTTTCTTTGAACCCTCTGA
GTCGCAGCGTAACCGCTCAAAATGTCACGTTGAAAGATGCATCGCATCAA
AAGCTACTGCACGTCGAAGAACTATCTATATGTCTTCCATCTTGGCGCAA
ACTAGACATATCTTCCCCGAAGTCTACGTTATTCACGAAGATCCATGGTT
TTGATCTATCTCACAATAACTGGTCCAGCCATTTCGACAACCTTGCGCAA
AAACGTCAAGATTGGATGATCTCTGAACCAACTCCCCCCTTGCTCTCCGT
TGGTAAGCAGGAAGCCGCCAATACTAAGATGGCTTGGGAAATAACGGCCC
GTATTTCAGCTATATATGTGTCCATGGGTACCTCCAAAAGCGATAAGCCA
TTGTTGCCACTAATCCCACTCCCCTCAATAGCTCTCAGCTCTTCCAAATT
GAATACTTTCTCCGAGGTTGTGCAAGTCGTTCAAGGATTGATCGGTCGTG
CAGTGCGTGAGGTAGGAACTAAATCGTTTCCCCGAGAGTTCCGAGATAGT
GCTAGACGCATGGCTCGCAACCTGGCCGTTACTGCCGCCGAGGAGTTTAT
TGTACAAGCTGGAGCAAAAGTTAAAGAGTTGCAAGAACGCGTGGGGGTTG
TTGAAGATTATGTCAAAGATTTGCCCGAGAGTGAGGGTGTTAGGACCTGG
CTTGGTCGCACTAGTGATTTCCTTAAGACTATCGACAGTTTACTCAGTGG
CGATGAGGAGAAGAGCTCACAACCAACAACGTCCCCAAGTGAAAGAGAGA
ATGTGCCCGGTTACTCTCCAGAGCAATACAGAGAACTCGATGAAGACTAA
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