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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5287.t1.start1 | Ggra5287.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000082_pilon 149649..149651 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5287.t1.stop1 | Ggra5287.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000082_pilon 152242..152244 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5287.t1 ID=Ggra5287.t1|Name=Ggra5287.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=792bp MVDLIDGVDLDYLSQLSAAVYDRILKARASPIRLASADIFIGPVVGREYS KVILNSVELEIGCPANFQVSQPLLVLVAPDGNLAHKLLVLGGGHRLLISS RILHLLAIPYQVVDFSNILGIKVLDVQQYEALVTHHIEASEPRPREYGIM QQVALYARLKVWWTQLEAKRVHWSVRKTRPKAMTKAKLIALYNTLRAISG IRSRYAIGFLEVSVRKTTRKDYICGADRLLQSGVVEDLCFLESQGRTRFS ISTLNVVRSLSVSRIRSTVKDWVRKRKKGDYSILRFEHTKKRISTKNAEQ PGPEIDKGEVRSALLNTGVEKRATSTTATTSLQTVRSPRPLLSVSKALSL DHSTTPAEQASTEQALLRPEPSPSVSPPAHAEKGDGDPRPTPCFETFDKV EKLLEKEESKSAKAKGAVLADVVSSRWEVVRRVKEELFHSTNPTAIDTIK LLSQKTEEVRNRGTNETLVEAEGGFLQSKLVLDNKDVRAIFKESMATDQA LVFTLSFLNNWTPDATSGIHVADPMHTAGWWEKRLTSKCEELKKLRRQVT RSTGYQRTCHEMMWSSGISLLFLAGSNHLSLAVVYNLFSLLNYFKSYGWR LKPGTVKKKVKASIIYLDSLGLDSPPIDLYDNMLFYLTACLPNVNINTDY IRSVLIRKYCGVHVQRDLECGFYASLNASFVSKDLALFRNGANVEDVDDT PGQRQAENQKDCNAETASNGENASSSGVTDDQTRTDFLRIAQEGERLVGD VSDQHLIRQWEECVSKAAALVKEMKGRSPPQRAPSENVQHK* back to topspliced messenger RNA >Ggra5287.t1 ID=Ggra5287.t1|Name=Ggra5287.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2376bp|location=Sequence derived from alignment at tig00000082_pilon:149649..152244+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGTGGACCTCATAGACGGAGTAGACCTCGACTACCTCAGTCAGCTATC TGCGGCTGTGTACGATCGTATTCTCAAAGCACGAGCTTCTCCCATTCGCC TTGCCAGCGCCGATATTTTTATAGGCCCTGTCGTTGGCAGAGAGTACTCG AAAGTCATTCTGAACAGTGTGGAATTGGAAATAGGATGTCCAGCGAACTT TCAGGTATCGCAACCTCTTCTTGTTCTGGTAGCACCTGATGGAAACCTCG CACACAAGCTTCTAGTTCTGGGAGGGGGCCACCGACTACTAATCAGTTCG CGAATTCTGCACCTTTTGGCAATTCCATATCAAGTTGTGGACTTCTCAAA TATATTAGGCATAAAAGTGCTCGACGTGCAGCAATATGAAGCTCTGGTTA CGCACCATATCGAAGCATCGGAGCCTCGTCCAAGGGAGTATGGAATTATG CAGCAGGTAGCTCTTTACGCAAGGCTTAAAGTGTGGTGGACCCAACTAGA GGCAAAACGTGTGCATTGGAGCGTTCGTAAGACTAGGCCGAAGGCGATGA CAAAAGCAAAGCTGATCGCTCTCTATAACACTTTGAGAGCAATCTCAGGG ATTCGAAGTCGTTATGCTATTGGGTTTCTAGAAGTATCTGTGCGTAAGAC CACACGAAAGGATTACATTTGTGGAGCCGATCGCCTCCTTCAATCGGGTG TTGTGGAAGATCTTTGTTTCTTAGAGTCACAAGGTCGTACTCGATTTTCT ATCTCTACTCTCAATGTAGTTCGTTCATTGTCAGTTTCAAGAATTAGAAG TACTGTAAAGGACTGGGTGCGGAAGAGGAAGAAGGGAGATTACTCCATAC TACGCTTCGAGCATACAAAGAAAAGGATATCAACAAAGAATGCAGAGCAA CCAGGCCCAGAGATTGACAAGGGCGAAGTAAGGAGTGCATTGCTTAACAC AGGAGTTGAAAAACGAGCCACGTCTACTACGGCCACAACCTCCCTCCAGA CTGTGAGGTCACCAAGGCCTTTACTATCTGTAAGCAAAGCCTTATCATTA GATCACTCAACTACGCCTGCAGAGCAGGCATCTACGGAACAGGCCTTACT TCGACCAGAGCCATCACCGTCCGTCTCCCCCCCAGCTCACGCAGAGAAAG GCGATGGGGATCCACGCCCAACACCTTGTTTCGAAACTTTTGATAAAGTG GAAAAACTATTGGAAAAGGAAGAAAGCAAAAGCGCGAAAGCAAAGGGTGC CGTTCTGGCGGATGTTGTATCATCGCGTTGGGAAGTTGTGCGTCGCGTAA AGGAAGAACTTTTCCACAGCACCAATCCCACTGCGATAGACACCATAAAA CTATTGTCTCAAAAGACGGAGGAGGTCAGAAACCGAGGTACGAACGAGAC ATTGGTAGAGGCCGAAGGTGGATTCCTGCAGAGCAAATTGGTGCTGGACA ATAAGGACGTTAGAGCAATTTTCAAGGAGAGCATGGCCACAGATCAAGCG TTGGTGTTCACACTCTCATTTCTGAATAACTGGACTCCAGATGCAACCAG TGGCATACATGTAGCCGACCCAATGCACACTGCGGGCTGGTGGGAGAAGC GTCTTACCTCGAAGTGTGAGGAGCTGAAAAAGCTTCGTCGTCAGGTTACG AGGTCAACTGGTTATCAGAGGACATGCCATGAAATGATGTGGAGCTCTGG GATCTCGCTACTCTTCCTAGCAGGTAGTAATCATTTGAGTCTTGCAGTAG TCTACAATCTATTTTCACTGCTGAACTACTTCAAAAGTTATGGATGGCGA TTGAAGCCTGGAACAGTGAAGAAGAAGGTTAAAGCATCAATTATATATCT TGACAGCCTCGGTCTGGACAGCCCGCCCATTGACTTGTACGACAACATGC TCTTTTACCTTACCGCCTGCTTGCCAAATGTGAACATCAATACGGACTAC ATTAGATCCGTTCTAATCCGAAAGTATTGCGGTGTTCATGTCCAGAGAGA CCTCGAGTGTGGCTTTTACGCTAGCTTAAACGCATCATTTGTCTCGAAGG ACCTCGCACTATTTCGCAACGGTGCGAACGTTGAAGATGTCGACGACACA CCCGGACAACGACAGGCAGAGAATCAGAAGGACTGTAACGCCGAAACCGC ATCAAACGGAGAGAACGCGTCTAGCTCTGGAGTTACTGACGACCAGACCC GCACGGACTTTCTACGCATCGCTCAAGAAGGAGAAAGACTGGTCGGAGAC GTCTCGGACCAACACTTGATAAGGCAGTGGGAAGAGTGTGTATCAAAGGC AGCGGCTTTGGTGAAGGAAATGAAAGGACGTTCTCCGCCACAACGAGCCC CAAGTGAAAATGTGCAACACAAATGA back to topprotein sequence of Ggra5287.t1 >Ggra5287.t1 ID=Ggra5287.t1|Name=Ggra5287.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=792bp
MVDLIDGVDLDYLSQLSAAVYDRILKARASPIRLASADIFIGPVVGREYS KVILNSVELEIGCPANFQVSQPLLVLVAPDGNLAHKLLVLGGGHRLLISS RILHLLAIPYQVVDFSNILGIKVLDVQQYEALVTHHIEASEPRPREYGIM QQVALYARLKVWWTQLEAKRVHWSVRKTRPKAMTKAKLIALYNTLRAISG IRSRYAIGFLEVSVRKTTRKDYICGADRLLQSGVVEDLCFLESQGRTRFS ISTLNVVRSLSVSRIRSTVKDWVRKRKKGDYSILRFEHTKKRISTKNAEQ PGPEIDKGEVRSALLNTGVEKRATSTTATTSLQTVRSPRPLLSVSKALSL DHSTTPAEQASTEQALLRPEPSPSVSPPAHAEKGDGDPRPTPCFETFDKV EKLLEKEESKSAKAKGAVLADVVSSRWEVVRRVKEELFHSTNPTAIDTIK LLSQKTEEVRNRGTNETLVEAEGGFLQSKLVLDNKDVRAIFKESMATDQA LVFTLSFLNNWTPDATSGIHVADPMHTAGWWEKRLTSKCEELKKLRRQVT RSTGYQRTCHEMMWSSGISLLFLAGSNHLSLAVVYNLFSLLNYFKSYGWR LKPGTVKKKVKASIIYLDSLGLDSPPIDLYDNMLFYLTACLPNVNINTDY IRSVLIRKYCGVHVQRDLECGFYASLNASFVSKDLALFRNGANVEDVDDT PGQRQAENQKDCNAETASNGENASSSGVTDDQTRTDFLRIAQEGERLVGD VSDQHLIRQWEECVSKAAALVKEMKGRSPPQRAPSENVQHK* back to topmRNA from alignment at tig00000082_pilon:149649..152244+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5287.t1 ID=Ggra5287.t1|Name=Ggra5287.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2596bp|location=Sequence derived from alignment at tig00000082_pilon:149649..152244+ (Gracilaria gracilis GNS1m male) ATGGTGGACCTCATAGACGGAGTAGACCTCGACTACCTCAGTCAGCTATC
TGCGGCTGTGTACGATCGTATTCTCAAAGCACGAGCTTCTCCCATTCGCC
TTGCCAGCGCCGATATTTTTATAGGCCCTGTCGTTGGCAGAGAGTACTCG
AAAGTCATTCTGAACAGTGTGGAATTGGAAATAGGATGTCCAGCGAACTT
TCAGGTATCGCAACCTCTTCTTGTTCTGGTAGCACCTGATGGAAACCTCG
CACACAAGCTTCTAGTTCTGGGAGGGGGCCACCGACTACTAATCAGTTCG
CGAATTCTGCACCTTTTGGCAATTCCATATCAAGTTGTGGACTTCTCAAA
TATATTAGGCATAAAAGTGCTCGACGTGCAGCAATATGAAGCTCTGGTTA
CGCACCATATCGAAGCATCGGAGCCTCGTCCAAGGGAGTATGGAATTATG
CAGCAGGTAGCTCTTTACGCAAGGCTTAAAGTGTGGTGGACCCAACTAGA
GGCAAAACGTGTGCATTGGAGCGTTCGTAAGACTAGGCCGAAGGCGATGA
CAAAAGCAAAGCTGATCGCTCTCTATAACACTTTGAGAGCAATCTCAGGG
ATTCGAAGTCGTTATGCTATTGGGTTTCTAGAAGTATCTGTGCGTAAGAC
CACACGAAAGGATTACATTTGTGGAGCCGATCGCCTCCTTCAATCGGGTG
TTGTGGAAGATCTTTGTTTCTTAGAGTCACAAGGTCGTACTCGATTTTCT
ATCTCTACTCTCAATGTAGTTCGTTCATTGTCAGTTTCAAGAATTAGAAG
TACTGTAAAGGACTGGGTGCGGAAGAGGAAGAAGGGAGATTACTCCATAC
TACGCTTCGAGCATACAAAGAAAAGGATATCAACAAAGAATGCAGAGCAA
CCAGGCCCAGAGATTGACAAGGGCGAAGTAAGGAGTGCATTGCTTAACAC
AGGAGTTGAAAAACGAGCCACGTCTACTACGGCCACAACCTCCCTCCAGA
CTGTGAGGTCACCAAGGCCTTTACTATCTGTAAGCAAAGCCTTATCATTA
GATCACTCAACTACGCCTGCAGAGCAGGCATCTACGGAACAGGCCTTACT
TCGACCAGAGCCATCACCGTCCGTCTCCCCCCCAGCTCACGCAGAGAAAG
GCGATGGGGATCCACGCCCAACGTTAGACGGGAAGGAACCACAGTTTAAG
CGTCAACGTCGAATTCCCCCAGAATGAAAAATGTACTTCCCTGGAAACTG
CAGACCTTGTTTCGAAACTTTTGATAAAGTGGAAAAACTATTGGAAAAGG
AAGAAAGCAAAAGCGCGAAAGCAAAGGGTGCCGTTCTGGCGGATGTTGTA
TCATCGCGTTGGGAAGTTGTGCGTCGCGTAAAGGAAGAACTTTTCCACAG
CACCAATCCCACTGCGATAGACACCATAAAACTATTGTCTCAAAAGACGG
AGGAGGTCAGAAACCGAGGTACGAACGAGACATTGGTAGAGGCCGAAGGT
GGATTCCTGCAGAGCAAATTGGTGCTGGACAATAAGGACGTTAGAGCAAT
TTTCAAGGAGAGCATGGCCACAGATCAAGCGTTGGTGTTCACACTCTCAT
TTCTGAATAACTGGACTCCAGATGCAACCAGTGGCATACATGTAGCCGAC
CCAATGCACACTGCGGGCTGGTGGGAGAAGCGTCTTACCTCGAAGTGTGA
GGAGCTGAAAAAGCTTCGTCGTCAGGTTACGAGGTCAACTGGTTATCAGA
GGACATGCCATGAAATGATGTGGAGCTCTGGGATCTCGCTACTCTTCCTA
GCAGGTAGTAATCATTTGAGTCTTGCAGTAGTCTACAATCTATTTTCACT
GCTGAACTACTTCAAAAGTTATGGATGGCGATTGAAGCCTGGAACAGTGA
AGAAGAAGGTTAAAGCATCAATTATATATCTTGACAGCCTCGGTCTGGAC
AGCCCGCCCATTGACTTGTACGACAACATGCTCTTTTACCTTACCGCCTG
CTTGCCAAATGTGAACATCAATACGGACTACATTAGATCCGTTCTAATCC
GAAAGTATTGCGGTGTTCATGTCCAGAGAGACCTCGAGTGTGGCTTTTAC
GCTAGCTTAAACGCATCATTTGTCTCGAAGGACCTCGCACTATTTCGCAA
CGGTGGTACAAAACAAATCATCCGTGATCTTAAGACATTCTACGCAACCT
ATCCATTTTTCGAGTATCATCTGCTCCTGCAAAATCGTTTACGTGCACTA
ACCGCAGCATATACTCGTGATCTCAAAGGTCATTCGATGTTCAGCGAACG
TTGAAGATGTCGACGACACACCCGGACAACGACAGGCAGAGAATCAGAAG
GACTGTAACGCCGAAACCGCATCAAACGGAGAGAACGCGTCTAGCTCTGG
AGTTACTGACGACCAGACCCGCACGGACTTTCTACGCATCGCTCAAGAAG
GAGAAAGACTGGTCGGAGACGTCTCGGACCAACACTTGATAAGGCAGTGG
GAAGAGTGTGTATCAAAGGCAGCGGCTTTGGTGAAGGAAATGAAAGGACG
TTCTCCGCCACAACGAGCCCCAAGTGAAAATGTGCAACACAAATGA back to topCoding sequence (CDS) from alignment at tig00000082_pilon:149649..152244+ >Ggra5287.t1 ID=Ggra5287.t1|Name=Ggra5287.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2376bp|location=Sequence derived from alignment at tig00000082_pilon:149649..152244+ (Gracilaria gracilis GNS1m male) ATGGTGGACCTCATAGACGGAGTAGACCTCGACTACCTCAGTCAGCTATC TGCGGCTGTGTACGATCGTATTCTCAAAGCACGAGCTTCTCCCATTCGCC TTGCCAGCGCCGATATTTTTATAGGCCCTGTCGTTGGCAGAGAGTACTCG AAAGTCATTCTGAACAGTGTGGAATTGGAAATAGGATGTCCAGCGAACTT TCAGGTATCGCAACCTCTTCTTGTTCTGGTAGCACCTGATGGAAACCTCG CACACAAGCTTCTAGTTCTGGGAGGGGGCCACCGACTACTAATCAGTTCG CGAATTCTGCACCTTTTGGCAATTCCATATCAAGTTGTGGACTTCTCAAA TATATTAGGCATAAAAGTGCTCGACGTGCAGCAATATGAAGCTCTGGTTA CGCACCATATCGAAGCATCGGAGCCTCGTCCAAGGGAGTATGGAATTATG CAGCAGGTAGCTCTTTACGCAAGGCTTAAAGTGTGGTGGACCCAACTAGA GGCAAAACGTGTGCATTGGAGCGTTCGTAAGACTAGGCCGAAGGCGATGA CAAAAGCAAAGCTGATCGCTCTCTATAACACTTTGAGAGCAATCTCAGGG ATTCGAAGTCGTTATGCTATTGGGTTTCTAGAAGTATCTGTGCGTAAGAC CACACGAAAGGATTACATTTGTGGAGCCGATCGCCTCCTTCAATCGGGTG TTGTGGAAGATCTTTGTTTCTTAGAGTCACAAGGTCGTACTCGATTTTCT ATCTCTACTCTCAATGTAGTTCGTTCATTGTCAGTTTCAAGAATTAGAAG TACTGTAAAGGACTGGGTGCGGAAGAGGAAGAAGGGAGATTACTCCATAC TACGCTTCGAGCATACAAAGAAAAGGATATCAACAAAGAATGCAGAGCAA CCAGGCCCAGAGATTGACAAGGGCGAAGTAAGGAGTGCATTGCTTAACAC AGGAGTTGAAAAACGAGCCACGTCTACTACGGCCACAACCTCCCTCCAGA CTGTGAGGTCACCAAGGCCTTTACTATCTGTAAGCAAAGCCTTATCATTA GATCACTCAACTACGCCTGCAGAGCAGGCATCTACGGAACAGGCCTTACT TCGACCAGAGCCATCACCGTCCGTCTCCCCCCCAGCTCACGCAGAGAAAG GCGATGGGGATCCACGCCCAACACCTTGTTTCGAAACTTTTGATAAAGTG GAAAAACTATTGGAAAAGGAAGAAAGCAAAAGCGCGAAAGCAAAGGGTGC CGTTCTGGCGGATGTTGTATCATCGCGTTGGGAAGTTGTGCGTCGCGTAA AGGAAGAACTTTTCCACAGCACCAATCCCACTGCGATAGACACCATAAAA CTATTGTCTCAAAAGACGGAGGAGGTCAGAAACCGAGGTACGAACGAGAC ATTGGTAGAGGCCGAAGGTGGATTCCTGCAGAGCAAATTGGTGCTGGACA ATAAGGACGTTAGAGCAATTTTCAAGGAGAGCATGGCCACAGATCAAGCG TTGGTGTTCACACTCTCATTTCTGAATAACTGGACTCCAGATGCAACCAG TGGCATACATGTAGCCGACCCAATGCACACTGCGGGCTGGTGGGAGAAGC GTCTTACCTCGAAGTGTGAGGAGCTGAAAAAGCTTCGTCGTCAGGTTACG AGGTCAACTGGTTATCAGAGGACATGCCATGAAATGATGTGGAGCTCTGG GATCTCGCTACTCTTCCTAGCAGGTAGTAATCATTTGAGTCTTGCAGTAG TCTACAATCTATTTTCACTGCTGAACTACTTCAAAAGTTATGGATGGCGA TTGAAGCCTGGAACAGTGAAGAAGAAGGTTAAAGCATCAATTATATATCT TGACAGCCTCGGTCTGGACAGCCCGCCCATTGACTTGTACGACAACATGC TCTTTTACCTTACCGCCTGCTTGCCAAATGTGAACATCAATACGGACTAC ATTAGATCCGTTCTAATCCGAAAGTATTGCGGTGTTCATGTCCAGAGAGA CCTCGAGTGTGGCTTTTACGCTAGCTTAAACGCATCATTTGTCTCGAAGG ACCTCGCACTATTTCGCAACGGTGCGAACGTTGAAGATGTCGACGACACA CCCGGACAACGACAGGCAGAGAATCAGAAGGACTGTAACGCCGAAACCGC ATCAAACGGAGAGAACGCGTCTAGCTCTGGAGTTACTGACGACCAGACCC GCACGGACTTTCTACGCATCGCTCAAGAAGGAGAAAGACTGGTCGGAGAC GTCTCGGACCAACACTTGATAAGGCAGTGGGAAGAGTGTGTATCAAAGGC AGCGGCTTTGGTGAAGGAAATGAAAGGACGTTCTCCGCCACAACGAGCCC CAAGTGAAAATGTGCAACACAAATGA back to top
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