Ggra2636.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2636.t1
Unique NameGgra2636.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length350
Homology
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A2V3IRC3 (Zinc finger protein-like 1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRC3_9FLOR)

HSP 1 Score: 343 bits (880), Expect = 6.250e-114
Identity = 182/345 (52.75%), Postives = 237/345 (68.70%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFDSNSTSQLTHAIRKRLRNMVTVTHFSAPTITTASSWDDSAKWKSSSSRNTINLKLEQRV-----EHPNAQRQTDSETTSKVLSETDCSDGIGPQGALKAKSNAD------GTPSRVSMAKRTLPSPQQTKTGELRLDLEPLPQNKDGNGPAMKTVKRESQSGGLLTSTSMRKVMKLGNRRLIELRKLLMSTNRKQLLTVIACVACIVLVGFLMSGEEELSVVAKPSVEHVSLPHVRVNPAFIQ 334
            MGRCG CR+ TQHFCF+HQ FVC+ CLV D+SVH RCVV TYRNFIE++SY WPP+C AC  +L+ + D +RRTCLHVEHA+CIE S      C +C T L D +  SQL  AIR+RL  M TV+  SAPT+ TASSWDDSA+W +S+S NT+NLK +  +     +HP        E  S+++S+TDCSD +     +K+ SN +      GTPSRVSMA RT+ +P +    + R+D++ LPQ         K VKR++ S  ++TSTS+RKV+KLGNRR I+LRK L STNR+QL T + C  CIV++ FLMSGEE+L   ++P  + VSLPHV VNPAFI+
Sbjct:    1 MGRCGACRAQTQHFCFIHQTFVCETCLVADDSVHGRCVVRTYRNFIEDASYQWPPVCAACATQLESNVDTIRRTCLHVEHATCIENSRAVNRECPLCNTILVDKSDHSQLAQAIRRRLHTMTTVSLGSAPTVITASSWDDSARW-TSNSNNTLNLKRQSTLPKALEDHP--------EDHSRIVSQTDCSDALNH---IKSHSNPERIATKEGTPSRVSMAARTVSTPPKPTQVDARIDMDILPQKVGHTSRTAKPVKRDATSSAIVTSTSVRKVIKLGNRRFIDLRKRL-STNRRQLATFLVCAICIVVITFLMSGEEQLPTASRPVTDQVSLPHVIVNPAFIK 332          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A7S1EQU9 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQU9_9RHOD)

HSP 1 Score: 118 bits (296), Expect = 1.850e-28
Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFDS-NSTSQLTHAIRKRL 118
            MGRC  CR  TQ+FCFVHQ F+C   LV  ++ H  CVV +YR ++++S+Y WPP C  C  E+  D + +R TCLH+ HA C+  S PP+  CS+C+  +    N T+ L   +R +L
Sbjct:    1 MGRCAECRKQTQNFCFVHQEFICPASLVASDA-HDLCVVGSYRKWVQDSAYPWPPQCSMCSNEIKTDENVIRLTCLHILHAKCLVESPPPQGACSICRAIVVPPPNDTTPLAQKLRAQL 118          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A7S1TJ70 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJ70_9RHOD)

HSP 1 Score: 122 bits (305), Expect = 3.100e-28
Identity = 60/148 (40.54%), Postives = 88/148 (59.46%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFDSNST-SQLTHAIRKRLRNMVTVTHFSAPTITTASSWDDSAKWKSS 147
            MGRCG CR  TQ+FC+VHQAFVC  C+VT   +H RCVV +YR ++++SSY+WPP C  C + L+ D   +R  CLH+ H SCI +S    H C  C  P+  S+   + +   ++ +L+    V    + T++ + S   SA+  SS
Sbjct:    1 MGRCGECRRQTQNFCYVHQAFVCSPCVVT-VPLHERCVVSSYRKWVQDSSYEWPPTCVTCQDRLEGDQPPLRLICLHMAHHSCITSSESLGHKCPACGEPILPSSEDETPIAQILKNQLKGSAWVQPALSSTVSHSESVPSSAQVDSS 147          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A5J4YYS8 (Zinc finger protein-like 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYS8_PORPP)

HSP 1 Score: 117 bits (292), Expect = 1.130e-25
Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFD-SNSTSQLTHAIRKRL 118
            MGRCG CR  TQ FCFV   FVC   L  +++ H RCVV +YR ++++SSY WPP C  C +E++V+ ++VR TCLHV HA C+  + PP   C  C TP+      T+ L   +R+++
Sbjct:    1 MGRCGDCRKQTQIFCFVCHEFVCPASLA-EKAAHDRCVVGSYRKWVQDSSYKWPPECALCSQEIEVEQESVRLTCLHVLHAKCLVDAPPPALACPECGTPIVPLPTDTAPLAEKLRRQM 118          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A7S1TLC5 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLC5_9RHOD)

HSP 1 Score: 113 bits (283), Expect = 1.160e-24
Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFDS-NSTSQLTHAIRKRL 118
            MGRC  CR  TQ FCFVHQ F+C   L + E+ H  CVV +YR ++++SSY+WPP C  C  EL ++ +  R TCLH  HA C+  S P   +C VC   +    N T+ L   +R +L
Sbjct:    1 MGRCAECRKQTQTFCFVHQEFICPASLASAEA-HALCVVGSYRKWVQDSSYEWPPKCALCATELTIETEVARLTCLHALHAKCLAYSPPQNLSCPVCAAAIVPGPNDTTPLAQKLRHQL 118          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A7S2ZKC9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZKC9_9RHOD)

HSP 1 Score: 104 bits (259), Expect = 6.960e-23
Identity = 52/122 (42.62%), Postives = 71/122 (58.20%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFDSNS-TSQLTHAIRKRLRNM 121
            MGRC  CR  TQ+FC VHQ FVC  CLV D   H RC V +YR+++ +SSY WPP C  C EEL  D    R  CL +   SC+    P +  C  C+T L  S++ T+ +   +R +L+++
Sbjct:    1 MGRCVGCRKQTQNFCHVHQEFVCVYCLV-DARGHARCHVGSYRDWVNDSSYPWPPKCVICSEELVSDDGVSRLLCLAIAEDSCLANKAPEDGKCPHCETSLIPSSTDTNSIASHLRSKLQDL 121          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A7S0FZ45 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZ45_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 1.110e-22
Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFDSNST-SQLTHAIRKRLRNM 121
            MGRC  CRS TQ+FC VHQ F C  CLV D   H RC V  YR+++ +SSY WPP C  C EEL  D    R  CL +   SC+ +  P +  C  C+T +  S++  + +   +R +L+ +
Sbjct:    1 MGRCVGCRSQTQNFCHVHQEFACVNCLV-DAPGHARCHVGAYRDWVNDSSYPWPPKCVICSEELVSDDGVSRLLCLAIVEDSCLASKAPEDGQCPHCETSMIPSSTDKNSIASHLRSKLKGL 121          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A7S2ZLH4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLH4_9RHOD)

HSP 1 Score: 104 bits (259), Expect = 2.420e-22
Identity = 52/122 (42.62%), Postives = 71/122 (58.20%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFDSNS-TSQLTHAIRKRLRNM 121
            MGRC  CR  TQ+FC VHQ FVC  CLV D   H RC V +YR+++ +SSY WPP C  C EEL  D    R  CL +   SC+    P +  C  C+T L  S++ T+ +   +R +L+++
Sbjct:    1 MGRCVGCRKQTQNFCHVHQEFVCVYCLV-DARGHARCHVGSYRDWVNDSSYPWPPKCVICSEELVSDDGVSRLLCLAIAEDSCLANKAPEDGKCPHCETSLIPSSTDTNSIASHLRSKLQDL 121          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A7S2ZR03 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZR03_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 9.870e-22
Identity = 55/133 (41.35%), Postives = 75/133 (56.39%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQT----PLFDSNSTSQLTHAIRKRLRNMVTVTHFSA 129
            MGRC  CR   Q+FC VHQ FVC  CLV     H RC V +YR ++++SSY WPP C  C +EL  D    R TCL +   SC+    PP+  C  C+T    P  D+ + +Q   A+R +L+++  V  FS+
Sbjct:    1 MGRCTGCRKQIQNFCHVHQEFVCLECLVGSPG-HARCYVGSYRGWVQDSSYPWPPKCVICSKELLSDDGVTRLTCLAIVEDSCLMNLVPPDGQCPHCETCLVPPPTDAGAIAQ---ALRTKLKDVPWVNKFSS 129          
BLAST of Ggra2636.t1 vs. uniprot
Match: A0A7S0FY22 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FY22_9RHOD)

HSP 1 Score: 98.6 bits (244), Expect = 2.370e-20
Identity = 49/112 (43.75%), Postives = 60/112 (53.57%), Query Frame = 0
Query:    1 MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSSYDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTPLFDSNSTSQLTH 112
            MGRC  CRS TQ+FC VHQ F C  CLV D   H RC V  YR+++ +SSY WPP C  C EEL  D    R  CL +   SC+ +  P +  C  C+  L +    S   H
Sbjct:    1 MGRCVGCRSQTQNFCHVHQEFACVNCLV-DAPGHARCHVGAYRDWVNDSSYPWPPKCVICSEELVSDDGVSRLLCLAIVEDSCLASKAPEDGQCPHCEVRLPEKALNSTRLH 111          
The following BLAST results are available for this feature:
BLAST of Ggra2636.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IRC36.250e-11452.75Zinc finger protein-like 1-like n=1 Tax=Gracilario... [more]
A0A7S1EQU91.850e-2843.70Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S1TJ703.100e-2840.54Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YYS81.130e-2544.54Zinc finger protein-like 1 n=1 Tax=Porphyridium pu... [more]
A0A7S1TLC51.160e-2443.70Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S2ZKC96.960e-2342.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0FZ451.110e-2240.98Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2ZLH42.420e-2242.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZR039.870e-2241.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0FY222.370e-2043.75Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 287..306
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 307..349
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..286
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 56..105
NoneNo IPR availableTMHMMTMhelixcoord: 287..306
IPR039043Zinc finger protein-like 1PANTHERPTHR12981ZINC FINGER PROTEIN-LIKE 1coord: 1..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000005_piloncontigtig00000005_pilon:1007431..1008620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2636.t1Ggra2636.t1Gracilaria gracilis GNS1m malemRNAtig00000005_pilon 1007431..1008620 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2636.t1 ID=Ggra2636.t1|Name=Ggra2636.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=350bp
MGRCGTCRSHTQHFCFVHQAFVCDGCLVTDESVHRRCVVWTYRNFIENSS
YDWPPICPACGEELDVDGDNVRRTCLHVEHASCIEASHPPEHNCSVCQTP
LFDSNSTSQLTHAIRKRLRNMVTVTHFSAPTITTASSWDDSAKWKSSSSR
NTINLKLEQRVEHPNAQRQTDSETTSKVLSETDCSDGIGPQGALKAKSNA
DGTPSRVSMAKRTLPSPQQTKTGELRLDLEPLPQNKDGNGPAMKTVKRES
QSGGLLTSTSMRKVMKLGNRRLIELRKLLMSTNRKQLLTVIACVACIVLV
GFLMSGEEELSVVAKPSVEHVSLPHVRVNPAFIQPRNAGNQESVPGLIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039043ZFPL1