Ggra6570.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6570.t1
Unique NameGgra6570.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length160
Homology
BLAST of Ggra6570.t1 vs. uniprot
Match: A0A2V3IK50 (60S ribosomal protein L21-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK50_9FLOR)

HSP 1 Score: 270 bits (691), Expect = 4.500e-91
Identity = 133/159 (83.65%), Postives = 146/159 (91.82%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELVEPIPYEFVV 159
            MVRSNGKRANTRHLFKK+FRKKGPEH+STYLQTF VGDFVDIHINPAVMKGMPHKFYQGRTGR+FNVSRTAVGV+VSKQVGN ILMKRFHIR EH+ KSRC++DFR+R  +RE +AR A + GEKYV+QKRTPVLP  AHVVD +TMELVEPIPYEFVV
Sbjct:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFHVGDFVDIHINPAVMKGMPHKFYQGRTGRIFNVSRTAVGVEVSKQVGNQILMKRFHIRIEHINKSRCSEDFRKRVLQREQDARGARERGEKYVVQKRTPVLPPNAHVVDATTMELVEPIPYEFVV 159          
BLAST of Ggra6570.t1 vs. uniprot
Match: R7QRP4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP4_CHOCR)

HSP 1 Score: 254 bits (649), Expect = 1.130e-84
Identity = 123/159 (77.36%), Postives = 143/159 (89.94%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELVEPIPYEFVV 159
            MVRSNGKRANTR LF+K FRKKG EHLSTYLQ F++GDFVDIHINPAVMKGMPHKFYQGR+GRVFNVSRT+VGV+VSK VGN I+MKRFHIRTEHVQKSRCN+D+ +R + RE+EAR+AH  G+KY + KRTP LP++AH+VD S MELV+PIPYEF+V
Sbjct:    1 MVRSNGKRANTRDLFRKAFRKKGNEHLSTYLQIFKIGDFVDIHINPAVMKGMPHKFYQGRSGRVFNVSRTSVGVEVSKTVGNRIMMKRFHIRTEHVQKSRCNEDYLKRCKGREMEAREAHSKGDKYNVIKRTPALPSEAHIVDASKMELVDPIPYEFIV 159          
BLAST of Ggra6570.t1 vs. uniprot
Match: Q7XYA8 (60S ribosome protein L21 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYA8_GRIJA)

HSP 1 Score: 234 bits (596), Expect = 1.350e-76
Identity = 115/159 (72.33%), Postives = 132/159 (83.02%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELVEPIPYEFVV 159
            MVRSNGKRANTR LFKK FRK G EH STYLQ F++G++VDIHINP +MKGMPHKFY GRTGRVFNVSRTAVGV+VSK+V + I+ KRFHIR EHV+KS+CN DF  R + RE+EA++AHK GEKY + KRTP LP  AH+V    MELVEPIPYEFVV
Sbjct:    1 MVRSNGKRANTRDLFKKAFRKSGNEHTSTYLQVFKIGEYVDIHINPTIMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKRVRHRIINKRFHIRIEHVRKSQCNKDFLDRCKLREIEAQEAHKRGEKYTVVKRTPALPRDAHLVTAGEMELVEPIPYEFVV 159          
BLAST of Ggra6570.t1 vs. uniprot
Match: A0A6T6CI30 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CI30_9RHOD)

HSP 1 Score: 190 bits (483), Expect = 2.130e-59
Identity = 92/159 (57.86%), Postives = 123/159 (77.36%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELVEPIPYEFVV 159
            MVRS GKR+NTR LFK+ FRK G   +STYL  F++G++VDI  N A+ +GMP K+Y GRTG++FNVSR AVGV+V+KQVGN I+ KRFH+R EHV+KSRC++DF++R ++R+   R+A + GEK +  KR PV P +AHVV  S M  +EP+PY+FVV
Sbjct:    1 MVRSGGKRSNTRDLFKRPFRKNGMPSISTYLTNFKIGEYVDIVANAAIQQGMPFKYYHGRTGKIFNVSRAAVGVEVTKQVGNRIIPKRFHVRIEHVKKSRCSEDFKKRVRERDAMRREAREKGEKLISDKRKPVTPPEAHVVSGSNMVYLEPLPYKFVV 159          
BLAST of Ggra6570.t1 vs. uniprot
Match: T2MFP5 (60S ribosomal protein L21 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MFP5_HYDVU)

HSP 1 Score: 164 bits (416), Expect = 3.340e-49
Identity = 87/161 (54.04%), Postives = 115/161 (71.43%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTME--LVEPIPYEFVV 159
            M    GKR  TR+LF K FRK G EHLSTYL+T++VGD VD+  N A+ KGMP+KFY G+TGRVFNV+++AVGV V+KQ+GN I+ K+ ++R EHV+ S+C DDF +R ++ E++ R A   G K V  +R PVLP +AH V        LVEPIPYEF++
Sbjct:    1 MTNPKGKRRGTRYLFSKKFRKHGVEHLSTYLKTYKVGDIVDVKGNGAIQKGMPYKFYHGKTGRVFNVTKSAVGVVVNKQLGNRIIPKKINVRIEHVKHSKCRDDFLRRVKENEVKKRAAKATGAK-VDCRRQPVLPREAHFVSSKNNAPILVEPIPYEFII 160          
BLAST of Ggra6570.t1 vs. uniprot
Match: A0A2U1LJ26 (Ribosomal protein L21e n=26 Tax=cellular organisms TaxID=131567 RepID=A0A2U1LJ26_ARTAN)

HSP 1 Score: 162 bits (410), Expect = 3.080e-48
Identity = 82/158 (51.90%), Postives = 113/158 (71.52%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELVEPIPYEFV 158
            M   +G R+ TR LF + FRKKG  HLSTYL+T+ VGD+VD+ +N AV KGMPHKFY GRTG+V+NV++ A+GV+++KQVGN I+ KR H+R EHV  SRC ++F+QR +K +    +A   GEK +  KR P+ P    +V+ +T+E V PIPY+ V
Sbjct:    1 MPAGHGLRSRTRDLFARGFRKKGTIHLSTYLRTYHVGDYVDVKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEMNKQVGNRIIKKRIHVRIEHVMPSRCTEEFKQRVKKNDQLKAEAKAKGEK-ISTKRQPLGPKPGFMVEGTTLETVTPIPYDVV 157          
BLAST of Ggra6570.t1 vs. uniprot
Match: A0A4D8Z9D7 (Large subunit ribosomal protein L21e n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Z9D7_SALSN)

HSP 1 Score: 161 bits (407), Expect = 8.780e-48
Identity = 81/158 (51.27%), Postives = 112/158 (70.89%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELVEPIPYEFV 158
            M   +G R+ TR  F + FRKKGP HLSTYL+T+++GD+VD+ +N ++ KGMPHKFY GRTGRV+NV++ AVGV+V+KQVGN I+ KR H+R EHVQ+SRC+++   R +K +    DA + G K +  KR P  P    +V  +T+E V PIPY+ V
Sbjct:    1 MPAGHGLRSRTRDSFSRAFRKKGPTHLSTYLRTYKIGDYVDVKVNGSIHKGMPHKFYHGRTGRVWNVTKRAVGVEVNKQVGNRIIRKRIHVRIEHVQQSRCHEEVMLRIKKNDQLKADAKEQG-KIISTKRQPEGPKPGFMVGGATLETVTPIPYDVV 157          
BLAST of Ggra6570.t1 vs. uniprot
Match: A0A426YF91 (Uncharacterized protein (Fragment) n=4 Tax=Zingiberales TaxID=4618 RepID=A0A426YF91_ENSVE)

HSP 1 Score: 160 bits (405), Expect = 2.800e-47
Identity = 81/158 (51.27%), Postives = 111/158 (70.25%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELVEPIPYEFV 158
            M   +G R+ TR LF + FRKKG   L+TYL+T+++GD+VD+ +N AV KGMPHKFY GRTG+V+NV++ A+GV+++KQVGN I+ KR H+R EHVQ SRC +DFR R +K +    DA   GE  +  KR P  P    +V+ +T+E V PIPY+ V
Sbjct:   16 MPAGHGLRSRTRDLFSRPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGKVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCQEDFRARVKKNDQLKADAKARGE-VISTKRQPEGPKPGFMVEGATLETVTPIPYDVV 172          
BLAST of Ggra6570.t1 vs. uniprot
Match: A0A7M5XGD2 (60S ribosomal protein L21 n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XGD2_9CNID)

HSP 1 Score: 159 bits (403), Expect = 3.140e-47
Identity = 85/161 (52.80%), Postives = 111/161 (68.94%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTME--LVEPIPYEFVV 159
            M   +GKR  TR+LF K ++K G EHLSTYL+ ++VGD VD+  N A  KGMP+KFY G+TGRVFNV+R AVGV V+KQ+GN I+ KR ++R EHV+ S C DDF  R +  E++  +A+  GEK V  +R PV P + H V     E  LVEPIPYEF++
Sbjct:    1 MTNPHGKRRGTRYLFSKGYKKNGVEHLSTYLKVYKVGDIVDVKGNGAFQKGMPYKFYHGKTGRVFNVTRRAVGVVVNKQLGNRIIPKRINVRIEHVRHSTCRDDFLNRVKANEVKKAEANAKGEK-VDCRRLPVQPREGHFVTTKRNEPTLVEPIPYEFII 160          
BLAST of Ggra6570.t1 vs. uniprot
Match: RL212 (60S ribosomal protein L21-2 n=4 Tax=Arabidopsis thaliana TaxID=3702 RepID=RL212_ARATH)

HSP 1 Score: 159 bits (403), Expect = 3.550e-47
Identity = 82/158 (51.90%), Postives = 112/158 (70.89%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMKGMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSRCNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELVEPIPYEFV 158
            M   +G RA TR LF + FRKKG   LSTYL+TF+VGD+VD+ +N A+ KGMPHKFY GRTGR++NV++ AVGV+V+KQ+GN I+ KR H+R EHVQ+SRC ++F+ R ++ ++   DA   GE  +  KR P  P    +V+  T+E V PIPY+ V
Sbjct:    1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGET-ISTKRQPKGPKPGFMVEGMTLETVTPIPYDVV 157          
The following BLAST results are available for this feature:
BLAST of Ggra6570.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK504.500e-9183.6560S ribosomal protein L21-2 n=1 Tax=Gracilariopsis... [more]
R7QRP41.130e-8477.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
Q7XYA81.350e-7672.3360S ribosome protein L21 n=1 Tax=Griffithsia japon... [more]
A0A6T6CI302.130e-5957.86Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
T2MFP53.340e-4954.0460S ribosomal protein L21 n=1 Tax=Hydra vulgaris T... [more]
A0A2U1LJ263.080e-4851.90Ribosomal protein L21e n=26 Tax=cellular organisms... [more]
A0A4D8Z9D78.780e-4851.27Large subunit ribosomal protein L21e n=1 Tax=Salvi... [more]
A0A426YF912.800e-4751.27Uncharacterized protein (Fragment) n=4 Tax=Zingibe... [more]
A0A7M5XGD23.140e-4752.8060S ribosomal protein L21 n=2 Tax=Clytia hemisphae... [more]
RL2123.550e-4751.9060S ribosomal protein L21-2 n=4 Tax=Arabidopsis th... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.250.3260coord: 99..157
e-value: 6.6E-13
score: 50.5
NoneNo IPR availablePANTHERPTHR20981:SF6RIBOSOMAL PROTEIN L21coord: 1..158
IPR036948Ribosomal protein L21 superfamilyGENE3D2.30.30.70Ribosomal protein L21coord: 1..98
e-value: 9.4E-38
score: 130.2
IPR001147Ribosomal protein L21ePFAMPF01157Ribosomal_L21ecoord: 1..101
e-value: 1.5E-39
score: 133.9
IPR001147Ribosomal protein L21ePANTHERPTHR2098160S RIBOSOMAL PROTEIN L21coord: 1..158
IPR018259Ribosomal protein L21e, conserved sitePROSITEPS01171RIBOSOMAL_L21Ecoord: 37..62
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 3..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:302403..302882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6570.t1Ggra6570.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 302403..302882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6570.t1 ID=Ggra6570.t1|Name=Ggra6570.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=160bp
MVRSNGKRANTRHLFKKTFRKKGPEHLSTYLQTFRVGDFVDIHINPAVMK
GMPHKFYQGRTGRVFNVSRTAVGVQVSKQVGNHILMKRFHIRTEHVQKSR
CNDDFRQRAQKRELEARDAHKHGEKYVIQKRTPVLPTKAHVVDVSTMELV
EPIPYEFVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036948Ribosomal_L21_sf
IPR001147Ribosomal_L21e
IPR018259Ribosomal_L21e_CS
IPR008991Translation_prot_SH3-like_sf