Ggra6559.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6559.t1
Unique NameGgra6559.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length101
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:268376..268678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6559Ggra6559Gracilaria gracilis GNS1m malegenetig00000081_pilon 268376..268678 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6559.t1.stop1Ggra6559.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000081_pilon 268376..268378 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6559.t1.CDS1Ggra6559.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000081_pilon 268376..268678 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6559.t1.exon1Ggra6559.t1.exon1Gracilaria gracilis GNS1m maleexontig00000081_pilon 268376..268678 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6559.t1.start1Ggra6559.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000081_pilon 268676..268678 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6559.t1Ggra6559.t1Gracilaria gracilis GNS1m malepolypeptidetig00000081_pilon 268376..268678 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6559.t1 ID=Ggra6559.t1|Name=Ggra6559.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=101bp
MRTNSNQREKYLVDTLRKSLRQALKKGRRDMESRQLKPKVKTFRADMADM
HRLSGRLRMAGIDLVDIGRRSLRLPCFGMYPGDMRRIAKKVVLEMYLSDR
*
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spliced messenger RNA

>Ggra6559.t1 ID=Ggra6559.t1|Name=Ggra6559.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=303bp|location=Sequence derived from alignment at tig00000081_pilon:268376..268678- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGACGAATTCGAACCAGAGAGAAAAGTACCTGGTTGACACGTTACG
CAAGTCGCTGAGGCAGGCGTTGAAGAAAGGCCGGAGGGACATGGAAAGCA
GGCAGCTGAAGCCGAAGGTGAAAACGTTCCGGGCTGACATGGCCGACATG
CACCGGCTGTCTGGGCGGCTGAGAATGGCTGGAATCGACCTGGTGGACAT
TGGGCGCAGAAGCTTGCGTTTACCGTGCTTTGGAATGTACCCGGGGGACA
TGAGACGCATTGCAAAGAAGGTTGTGCTTGAAATGTACCTCTCGGACAGG
TAA
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protein sequence of Ggra6559.t1

>Ggra6559.t1 ID=Ggra6559.t1|Name=Ggra6559.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=101bp
MRTNSNQREKYLVDTLRKSLRQALKKGRRDMESRQLKPKVKTFRADMADM
HRLSGRLRMAGIDLVDIGRRSLRLPCFGMYPGDMRRIAKKVVLEMYLSDR
*
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mRNA from alignment at tig00000081_pilon:268376..268678-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6559.t1 ID=Ggra6559.t1|Name=Ggra6559.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=303bp|location=Sequence derived from alignment at tig00000081_pilon:268376..268678- (Gracilaria gracilis GNS1m male)
ATGAGGACGAATTCGAACCAGAGAGAAAAGTACCTGGTTGACACGTTACG
CAAGTCGCTGAGGCAGGCGTTGAAGAAAGGCCGGAGGGACATGGAAAGCA
GGCAGCTGAAGCCGAAGGTGAAAACGTTCCGGGCTGACATGGCCGACATG
CACCGGCTGTCTGGGCGGCTGAGAATGGCTGGAATCGACCTGGTGGACAT
TGGGCGCAGAAGCTTGCGTTTACCGTGCTTTGGAATGTACCCGGGGGACA
TGAGACGCATTGCAAAGAAGGTTGTGCTTGAAATGTACCTCTCGGACAGG
TAA
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Coding sequence (CDS) from alignment at tig00000081_pilon:268376..268678-

>Ggra6559.t1 ID=Ggra6559.t1|Name=Ggra6559.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=303bp|location=Sequence derived from alignment at tig00000081_pilon:268376..268678- (Gracilaria gracilis GNS1m male)
ATGAGGACGAATTCGAACCAGAGAGAAAAGTACCTGGTTGACACGTTACG
CAAGTCGCTGAGGCAGGCGTTGAAGAAAGGCCGGAGGGACATGGAAAGCA
GGCAGCTGAAGCCGAAGGTGAAAACGTTCCGGGCTGACATGGCCGACATG
CACCGGCTGTCTGGGCGGCTGAGAATGGCTGGAATCGACCTGGTGGACAT
TGGGCGCAGAAGCTTGCGTTTACCGTGCTTTGGAATGTACCCGGGGGACA
TGAGACGCATTGCAAAGAAGGTTGTGCTTGAAATGTACCTCTCGGACAGG
TAA
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