Ggra6594.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6594.t1
Unique NameGgra6594.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Homology
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BLAST of Ggra6594.t1 vs. uniprot
Match: A0A2V3J414 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J414_9FLOR)

HSP 1 Score: 402 bits (1032), Expect = 2.380e-138
Identity = 213/303 (70.30%), Postives = 243/303 (80.20%), Query Frame = 0 
Query:    1 MSSSPAWLSVALATLAAVEDEPSEVLRTGIRKLRQSHILHHLNRWARHVWRPAISAEQLQALTNNPQPSSVQRLNAGAASLLAALLEAVRRCKAEPWLKVIGVMFLADDPWAIDVGHEKQAQVDKCVRAIESLFADSESVASAAAALNSEAVELPVDGAFAASTDEAFAELRCRVAALQLQLDDVTAVVRRNEQNTKDLLSSFHFWSMLLLDELRSYKLAVRSPTTTPLQSQTASELSAGLPPMRPLSSAWGTDSVPSEQNRGNSTPNNGKPLAAASASARPVKPEPN---RPKRVFRDGKWI 300
            M+SSPAWL+VAL+TLA VE+EP++VL  GIRKL Q HILHHLNRWARHVWRPAI+ EQLQALTN P+P+SVQRLNAGAASLL ALLEAVRRC AE WL+V+GVMFLA DPWAIDVGHE+QAQV+KC  AIE LF +S+ VA   AALN+E +ELPVDG FAAS DE+FAELRCRVAALQLQLDDVTAVVR+NE+NTKDLLSSFHFWS+LLLDELRSYK AVRSP +TP QSQ A ++ AGLPPMRPL + +  D    +     S   NG   A  +AS       P    +PKRVFRDGKW+
Sbjct:    1 MTSSPAWLTVALSTLATVEEEPAQVLHHGIRKLPQFHILHHLNRWARHVWRPAITPEQLQALTNRPEPASVQRLNAGAASLLGALLEAVRRCDAERWLQVLGVMFLAADPWAIDVGHEEQAQVNKCAHAIELLFENSQQVAITVAALNTETIELPVDGVFAASKDESFAELRCRVAALQLQLDDVTAVVRQNEKNTKDLLSSFHFWSLLLLDELRSYKHAVRSPVSTPTQSQAA-DMGAGLPPMRPLPAGYKRDGASGDVYAAFSAATNGAWSAKGNASIATSPRAPKGELKPKRVFRDGKWV 302
The following BLAST results are available for this feature:
BLAST of Ggra6594.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4142.380e-13870.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:482491..483399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6594.t1Ggra6594.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 482491..483399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6594.t1 ID=Ggra6594.t1|Name=Ggra6594.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MSSSPAWLSVALATLAAVEDEPSEVLRTGIRKLRQSHILHHLNRWARHVW
RPAISAEQLQALTNNPQPSSVQRLNAGAASLLAALLEAVRRCKAEPWLKV
IGVMFLADDPWAIDVGHEKQAQVDKCVRAIESLFADSESVASAAAALNSE
AVELPVDGAFAASTDEAFAELRCRVAALQLQLDDVTAVVRRNEQNTKDLL
SSFHFWSMLLLDELRSYKLAVRSPTTTPLQSQTASELSAGLPPMRPLSSA
WGTDSVPSEQNRGNSTPNNGKPLAAASASARPVKPEPNRPKRVFRDGKWI
LL*
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