Ggra6594.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6594.t1
Unique NameGgra6594.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:482491..483399 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6594Ggra6594Gracilaria gracilis GNS1m malegenetig00000081_pilon 482491..483399 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6594.t1.stop1Ggra6594.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000081_pilon 482491..482493 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6594.t1.CDS1Ggra6594.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000081_pilon 482491..483399 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6594.t1.exon1Ggra6594.t1.exon1Gracilaria gracilis GNS1m maleexontig00000081_pilon 482491..483399 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6594.t1.start1Ggra6594.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000081_pilon 483397..483399 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6594.t1Ggra6594.t1Gracilaria gracilis GNS1m malepolypeptidetig00000081_pilon 482491..483399 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6594.t1 ID=Ggra6594.t1|Name=Ggra6594.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=303bp
MSSSPAWLSVALATLAAVEDEPSEVLRTGIRKLRQSHILHHLNRWARHVW
RPAISAEQLQALTNNPQPSSVQRLNAGAASLLAALLEAVRRCKAEPWLKV
IGVMFLADDPWAIDVGHEKQAQVDKCVRAIESLFADSESVASAAAALNSE
AVELPVDGAFAASTDEAFAELRCRVAALQLQLDDVTAVVRRNEQNTKDLL
SSFHFWSMLLLDELRSYKLAVRSPTTTPLQSQTASELSAGLPPMRPLSSA
WGTDSVPSEQNRGNSTPNNGKPLAAASASARPVKPEPNRPKRVFRDGKWI
LL*
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spliced messenger RNA

>Ggra6594.t1 ID=Ggra6594.t1|Name=Ggra6594.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=909bp|location=Sequence derived from alignment at tig00000081_pilon:482491..483399- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCTCCTCACCGGCGTGGCTATCGGTAGCGCTCGCAACCTTGGCCGC
GGTGGAGGACGAACCGTCCGAAGTGCTGCGTACGGGGATTAGAAAGCTCA
GACAATCGCACATCCTACATCACCTTAACCGTTGGGCTCGTCACGTATGG
CGCCCAGCAATCTCGGCAGAACAACTGCAAGCACTCACCAACAATCCACA
ACCTTCTTCCGTACAACGTCTCAACGCGGGCGCAGCATCGCTGCTCGCGG
CGCTTCTTGAAGCCGTGCGACGCTGCAAAGCGGAGCCCTGGCTCAAAGTC
ATCGGCGTCATGTTTCTCGCAGACGACCCGTGGGCCATAGACGTTGGCCA
CGAGAAACAAGCGCAAGTTGACAAGTGCGTTCGCGCCATCGAATCCTTGT
TTGCCGATTCTGAGTCAGTCGCGAGCGCCGCAGCGGCGTTGAATTCCGAG
GCGGTGGAATTGCCTGTGGATGGCGCGTTTGCCGCATCTACCGACGAAGC
GTTCGCAGAACTTCGATGTCGCGTGGCAGCTCTGCAGCTGCAGCTAGATG
ACGTCACGGCGGTCGTGCGACGCAATGAGCAGAACACAAAGGACCTACTT
AGCTCGTTTCATTTTTGGTCGATGCTGTTGCTCGATGAGTTGCGCAGTTA
CAAGCTGGCCGTGAGATCGCCCACTACCACACCTTTACAATCACAGACTG
CGTCCGAACTGAGCGCTGGATTGCCACCCATGAGACCACTATCGTCGGCG
TGGGGAACGGACTCTGTTCCCAGCGAACAGAACAGAGGCAACAGTACTCC
CAATAATGGCAAACCGTTAGCTGCAGCATCTGCTTCCGCGCGACCGGTTA
AGCCAGAGCCTAATCGACCTAAGCGAGTGTTTCGGGATGGCAAATGGATC
TTGCTGTGA
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protein sequence of Ggra6594.t1

>Ggra6594.t1 ID=Ggra6594.t1|Name=Ggra6594.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MSSSPAWLSVALATLAAVEDEPSEVLRTGIRKLRQSHILHHLNRWARHVW
RPAISAEQLQALTNNPQPSSVQRLNAGAASLLAALLEAVRRCKAEPWLKV
IGVMFLADDPWAIDVGHEKQAQVDKCVRAIESLFADSESVASAAAALNSE
AVELPVDGAFAASTDEAFAELRCRVAALQLQLDDVTAVVRRNEQNTKDLL
SSFHFWSMLLLDELRSYKLAVRSPTTTPLQSQTASELSAGLPPMRPLSSA
WGTDSVPSEQNRGNSTPNNGKPLAAASASARPVKPEPNRPKRVFRDGKWI
LL*
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mRNA from alignment at tig00000081_pilon:482491..483399-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6594.t1 ID=Ggra6594.t1|Name=Ggra6594.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=909bp|location=Sequence derived from alignment at tig00000081_pilon:482491..483399- (Gracilaria gracilis GNS1m male)
ATGTCCTCCTCACCGGCGTGGCTATCGGTAGCGCTCGCAACCTTGGCCGC
GGTGGAGGACGAACCGTCCGAAGTGCTGCGTACGGGGATTAGAAAGCTCA
GACAATCGCACATCCTACATCACCTTAACCGTTGGGCTCGTCACGTATGG
CGCCCAGCAATCTCGGCAGAACAACTGCAAGCACTCACCAACAATCCACA
ACCTTCTTCCGTACAACGTCTCAACGCGGGCGCAGCATCGCTGCTCGCGG
CGCTTCTTGAAGCCGTGCGACGCTGCAAAGCGGAGCCCTGGCTCAAAGTC
ATCGGCGTCATGTTTCTCGCAGACGACCCGTGGGCCATAGACGTTGGCCA
CGAGAAACAAGCGCAAGTTGACAAGTGCGTTCGCGCCATCGAATCCTTGT
TTGCCGATTCTGAGTCAGTCGCGAGCGCCGCAGCGGCGTTGAATTCCGAG
GCGGTGGAATTGCCTGTGGATGGCGCGTTTGCCGCATCTACCGACGAAGC
GTTCGCAGAACTTCGATGTCGCGTGGCAGCTCTGCAGCTGCAGCTAGATG
ACGTCACGGCGGTCGTGCGACGCAATGAGCAGAACACAAAGGACCTACTT
AGCTCGTTTCATTTTTGGTCGATGCTGTTGCTCGATGAGTTGCGCAGTTA
CAAGCTGGCCGTGAGATCGCCCACTACCACACCTTTACAATCACAGACTG
CGTCCGAACTGAGCGCTGGATTGCCACCCATGAGACCACTATCGTCGGCG
TGGGGAACGGACTCTGTTCCCAGCGAACAGAACAGAGGCAACAGTACTCC
CAATAATGGCAAACCGTTAGCTGCAGCATCTGCTTCCGCGCGACCGGTTA
AGCCAGAGCCTAATCGACCTAAGCGAGTGTTTCGGGATGGCAAATGGATC
TTGCTGTGA
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Coding sequence (CDS) from alignment at tig00000081_pilon:482491..483399-

>Ggra6594.t1 ID=Ggra6594.t1|Name=Ggra6594.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=909bp|location=Sequence derived from alignment at tig00000081_pilon:482491..483399- (Gracilaria gracilis GNS1m male)
ATGTCCTCCTCACCGGCGTGGCTATCGGTAGCGCTCGCAACCTTGGCCGC
GGTGGAGGACGAACCGTCCGAAGTGCTGCGTACGGGGATTAGAAAGCTCA
GACAATCGCACATCCTACATCACCTTAACCGTTGGGCTCGTCACGTATGG
CGCCCAGCAATCTCGGCAGAACAACTGCAAGCACTCACCAACAATCCACA
ACCTTCTTCCGTACAACGTCTCAACGCGGGCGCAGCATCGCTGCTCGCGG
CGCTTCTTGAAGCCGTGCGACGCTGCAAAGCGGAGCCCTGGCTCAAAGTC
ATCGGCGTCATGTTTCTCGCAGACGACCCGTGGGCCATAGACGTTGGCCA
CGAGAAACAAGCGCAAGTTGACAAGTGCGTTCGCGCCATCGAATCCTTGT
TTGCCGATTCTGAGTCAGTCGCGAGCGCCGCAGCGGCGTTGAATTCCGAG
GCGGTGGAATTGCCTGTGGATGGCGCGTTTGCCGCATCTACCGACGAAGC
GTTCGCAGAACTTCGATGTCGCGTGGCAGCTCTGCAGCTGCAGCTAGATG
ACGTCACGGCGGTCGTGCGACGCAATGAGCAGAACACAAAGGACCTACTT
AGCTCGTTTCATTTTTGGTCGATGCTGTTGCTCGATGAGTTGCGCAGTTA
CAAGCTGGCCGTGAGATCGCCCACTACCACACCTTTACAATCACAGACTG
CGTCCGAACTGAGCGCTGGATTGCCACCCATGAGACCACTATCGTCGGCG
TGGGGAACGGACTCTGTTCCCAGCGAACAGAACAGAGGCAACAGTACTCC
CAATAATGGCAAACCGTTAGCTGCAGCATCTGCTTCCGCGCGACCGGTTA
AGCCAGAGCCTAATCGACCTAAGCGAGTGTTTCGGGATGGCAAATGGATC
TTGCTGTGA
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