Ggra6541.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6541.t1
Unique NameGgra6541.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length162
Homology
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A2V3IET0 (D-aminoacyl-tRNA deacylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IET0_9FLOR)

HSP 1 Score: 259 bits (661), Expect = 1.950e-86
Identity = 125/161 (77.64%), Postives = 141/161 (87.58%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDARQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICLTSTNGKCQAW 161
            MRLVVQKVSQAAVTSS +G PTVT+SI  GLCVLVGFER DT+ DL A VKQLLKLRLF+DD R  +N+ ++ QA ADLLLVSQFTLN+ LKSGRPSFHRA+PP  AS MFD FVQ C+PVE+GGGVVRSGVFGAWMQLQLVNEGP+T+CLT+T+GKCQAW
Sbjct:    1 MRLVVQKVSQAAVTSSVEGQPTVTSSIHTGLCVLVGFERTDTESDLHACVKQLLKLRLFSDDTRNTKNSLSVGQAGADLLLVSQFTLNSVLKSGRPSFHRAMPPSDASAMFDRFVQLCKPVEEGGGVVRSGVFGAWMQLQLVNEGPYTVCLTATDGKCQAW 161          
BLAST of Ggra6541.t1 vs. uniprot
Match: R7QR91 (D-aminoacyl-tRNA deacylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR91_CHOCR)

HSP 1 Score: 177 bits (448), Expect = 6.000e-54
Identity = 94/166 (56.63%), Postives = 113/166 (68.07%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDARQARN----AFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRP-VEQGGGVVRSGVFGAWMQLQLVNEGPHTICLTSTNGKCQAW 161
            MRLVVQKVSQAAVTS  +G    TA I RG C LVGFE+DDT  D  +   QLLKLR+F +   +       A NL     DLLLVSQFTLNATLKSGRPSFHRA+ P  A  +F+ F++ CR  + + G  V+SG+FG++MQL LVN+GP TICLT  +GKC  W
Sbjct:    1 MRLVVQKVSQAAVTSVAEGAAAETAEIGRGFCALVGFEKDDTISDCQSMSSQLLKLRIFPEAPSETGPGRVYAANLGDVQQDLLLVSQFTLNATLKSGRPSFHRAMGPTNAGPLFEEFIKLCREGLRERGCEVKSGIFGSYMQLHLVNDGPFTICLTCKDGKCSTW 166          
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A1Z5LH98 (D-aminoacyl-tRNA deacylase (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LH98_ORNMO)

HSP 1 Score: 124 bits (310), Expect = 5.460e-33
Identity = 72/159 (45.28%), Postives = 106/159 (66.67%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDA--RQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICLTSTNGK 157
            MR V+Q+V+ AAVT   DG   V +SI RGLCVLVG  RDD++DD++  V++++ L+LF DD+  R  ++A +L     +LL VSQFTL  TLK  +P FH+A+  ER+   +  F++R +  EQG  +V+ G FGA MQ+ + N+GP T+ L S++ K
Sbjct:    1 MRAVIQRVASAAVTV--DGR--VISSIGRGLCVLVGIHRDDSEDDMEYIVRKIVNLKLFDDDSGKRWKQSARDL---KLELLCVSQFTLYCTLKGNKPDFHQAMEGERSKAFYCEFLRRLK-AEQGAALVKDGEFGALMQVDIRNDGPVTVELESSHFK 151          
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A293LV33 (D-aminoacyl-tRNA deacylase (Fragment) n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A293LV33_ORNER)

HSP 1 Score: 119 bits (299), Expect = 2.490e-31
Identity = 67/157 (42.68%), Postives = 103/157 (65.61%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDARQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICLTSTNGK 157
            MR V+Q+V+ AAV  S DG   + +SI RGLCVL+G  RDDT+DD++  ++++L L+LF DD+ + R   ++     ++L VSQFTL  TLK  +P FH+A+  ER+   +  F++R +  E  G +V+ G FGA MQ+ + N+GP T+ L S++ K
Sbjct:    1 MRAVIQRVASAAV--SVDGR--LVSSIGRGLCVLLGIHRDDTEDDMEYIIRKVLNLKLFDDDSGK-RWKQSVRDLKLEVLCVSQFTLYCTLKGNKPDFHQAMDGERSKAFYSEFLRRLQS-EHDGALVKDGEFGALMQVDIRNDGPVTVELESSHFK 151          
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A1M5CFV7 (D-aminoacyl-tRNA deacylase n=1 Tax=Mariniphaga anaerophila TaxID=1484053 RepID=A0A1M5CFV7_9BACT)

HSP 1 Score: 114 bits (286), Expect = 1.330e-29
Identity = 66/154 (42.86%), Postives = 100/154 (64.94%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDARQARNAFNLVQAAADLLLVSQFTLNATLKSG-RPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICLTS 153
            MRLV+QKVS+A VT  +     V +SI +GL VL+G E  DTDDD+D  +K++++LR+F D++       ++     D+++VSQFTL+A+ K G RPS+ RA  P+ A  M++ FV +    E  G  + +G+FGA M++ LVN+GP TI + S
Sbjct:    1 MRLVIQKVSEAKVTVEKK----VISSIGKGLLVLIGIEDADTDDDIDWLIKKMVQLRIFDDESGVMN--LSVQDVGGDIIVVSQFTLHASTKKGNRPSYIRAAKPDFAVPMYEKFVAKTE--EALGKKIGTGIFGAMMEVSLVNDGPVTIIIDS 146          
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A224YVD4 (D-aminoacyl-tRNA deacylase n=8 Tax=Ixodidae TaxID=6939 RepID=A0A224YVD4_9ACAR)

HSP 1 Score: 114 bits (286), Expect = 2.460e-29
Identity = 65/154 (42.21%), Postives = 98/154 (63.64%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDARQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICLTST 154
            MR V+Q+V  AAV    DG   + +SI RGLCVL+G  RDDT+DD+D  V+++L L+LF DDA + R   ++ +   ++L VSQFTL  TLK  +P FH A+  +R+  +++ F+ + R  E     V+ G FGA MQ+ + N+GP T+ + S+
Sbjct:    1 MRAVIQRVRSAAVHV--DG--CLVSSIGRGLCVLIGIHRDDTEDDIDYIVRKILNLKLFDDDAGK-RWKLSVRELQFEVLCVSQFTLYGTLKGNKPDFHLAMEGDRSKQLYERFLHKIR-TEHKEDFVKDGEFGALMQVHIQNDGPVTLEIESS 148          
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A6M2CRF2 (D-aminoacyl-tRNA deacylase n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CRF2_RHIMP)

HSP 1 Score: 114 bits (285), Expect = 3.480e-29
Identity = 65/154 (42.21%), Postives = 98/154 (63.64%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDARQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICLTST 154
            MR V+Q+V  AAV    DG   + +SI RGLCVL+G  RDDT+DD+D  V+++L L+LF DDA + R   ++ +   ++L VSQFTL  TLK  +P FH A+  +R+   ++ F+ + R  E     V++G FGA MQ+ + N+GP T+ + S+
Sbjct:    1 MRAVIQRVRSAAVHV--DGR--LISSIGRGLCVLIGIHRDDTEDDIDYIVRKILNLKLFDDDAGK-RWKLSVRELQFEVLCVSQFTLYGTLKGNKPDFHLAMEGDRSKQFYERFLHKIR-TEHKEDFVKNGEFGALMQVDIQNDGPVTLEIESS 148          
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A6P7UKW6 (D-aminoacyl-tRNA deacylase n=4 Tax=Ixodes TaxID=6944 RepID=A0A6P7UKW6_IXOSC)

HSP 1 Score: 114 bits (285), Expect = 3.480e-29
Identity = 70/158 (44.30%), Postives = 98/158 (62.03%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFT-DDARQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICLTSTNGK 157
            MR VVQ+VS AAV    DG   + +SI RGLCVLVG  R+DTD D+D  V+++L L+LF  DD ++ R +    +   ++L VSQFTL  TLK  +P FH A+  +R+   +  F++R R  E G  +V+ G FG  MQ+ + N+GP TI L S+  K
Sbjct:    1 MRAVVQRVSSAAVHV--DGR--LVSSIGRGLCVLVGIHRNDTDGDVDYIVRKVLNLKLFNGDDGKRWRRSAR--ELGLEVLCVSQFTLQCTLKGNKPDFHLAMDGDRSRDFYAEFLRRMR-AEHGEQLVKDGEFGTLMQVDIRNDGPVTIELESSGFK 151          
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A843HIE4 (D-aminoacyl-tRNA deacylase n=1 Tax=Methanosphaera sp. TaxID=2666342 RepID=A0A843HIE4_9EURY)

HSP 1 Score: 113 bits (282), Expect = 4.770e-29
Identity = 64/151 (42.38%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDARQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICL 151
            M+L+VQ+VS+A+V         +   I  G  VLVGF  +DT+ + D    +LLKLR+F DD    R   +L+    +LLL+ QFTL A+ K  RPSFH+++ PE A+V+FD+F   C          + GVFGA M + L+N GP TICL
Sbjct:    1 MKLIVQRVSRASVEVDEK----IVGKIDEGFMVLVGFGVNDTEREADFLANKLLKLRIFEDD--DDRMNLSLLDTDNELLLIPQFTLYASTKKHRPSFHKSMNPEDANVLFDYFCDECAKKVH----TQRGVFGAHMNVSLINNGPVTICL 141          
BLAST of Ggra6541.t1 vs. uniprot
Match: A0A125RCL9 (D-aminoacyl-tRNA deacylase n=1 Tax=Methanobrevibacter sp. YE315 TaxID=1609968 RepID=A0A125RCL9_9EURY)

HSP 1 Score: 113 bits (282), Expect = 4.770e-29
Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 0
Query:    1 MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAVKQLLKLRLFTDDARQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHRALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTICL 151
            M+LVVQ+VS A+V             I  GL VLVGF  +DT+ + D   K+L+KLR+F D+    R   ++      LLLV QFTL A  K  RPSFH+AL P++A+V+FD+F Q+C         V +G FGA+M++ L+N+GP TI L
Sbjct:    1 MKLVVQRVSNASVEVDEK----TVGKIDGGLMVLVGFGENDTEREADYLSKKLVKLRIFQDE--NGRMNKSVKDIGGKLLLVPQFTLYAHTKKNRPSFHKALAPDKATVLFDYFAQKCSEEVD----VETGEFGAYMKVSLLNDGPVTILL 141          
The following BLAST results are available for this feature:
BLAST of Ggra6541.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IET01.950e-8677.64D-aminoacyl-tRNA deacylase n=1 Tax=Gracilariopsis ... [more]
R7QR916.000e-5456.63D-aminoacyl-tRNA deacylase n=1 Tax=Chondrus crispu... [more]
A0A1Z5LH985.460e-3345.28D-aminoacyl-tRNA deacylase (Fragment) n=1 Tax=Orni... [more]
A0A293LV332.490e-3142.68D-aminoacyl-tRNA deacylase (Fragment) n=2 Tax=Orni... [more]
A0A1M5CFV71.330e-2942.86D-aminoacyl-tRNA deacylase n=1 Tax=Mariniphaga ana... [more]
A0A224YVD42.460e-2942.21D-aminoacyl-tRNA deacylase n=8 Tax=Ixodidae TaxID=... [more]
A0A6M2CRF23.480e-2942.21D-aminoacyl-tRNA deacylase n=2 Tax=Rhipicephalus m... [more]
A0A6P7UKW63.480e-2944.30D-aminoacyl-tRNA deacylase n=4 Tax=Ixodes TaxID=69... [more]
A0A843HIE44.770e-2942.38D-aminoacyl-tRNA deacylase n=1 Tax=Methanosphaera ... [more]
A0A125RCL94.770e-2943.71D-aminoacyl-tRNA deacylase n=1 Tax=Methanobrevibac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023509D-aminoacyl-tRNA deacylase-like superfamilyGENE3D3.50.80.10coord: 1..152
e-value: 3.5E-45
score: 156.3
IPR023509D-aminoacyl-tRNA deacylase-like superfamilySUPERFAMILY69500DTD-likecoord: 1..151
IPR003732D-aminoacyl-tRNA deacylase DTDTIGRFAMTIGR00256TIGR00256coord: 1..153
e-value: 5.2E-37
score: 125.5
IPR003732D-aminoacyl-tRNA deacylase DTDPFAMPF02580Tyr_Deacylasecoord: 2..151
e-value: 1.4E-41
score: 142.3
IPR003732D-aminoacyl-tRNA deacylase DTDPANTHERPTHR10472D-TYROSYL-TRNA TYR DEACYLASEcoord: 1..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:217281..217766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6541.t1Ggra6541.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 217281..217766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6541.t1 ID=Ggra6541.t1|Name=Ggra6541.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=162bp
MRLVVQKVSQAAVTSSRDGHPTVTASIQRGLCVLVGFERDDTDDDLDAAV
KQLLKLRLFTDDARQARNAFNLVQAAADLLLVSQFTLNATLKSGRPSFHR
ALPPERASVMFDHFVQRCRPVEQGGGVVRSGVFGAWMQLQLVNEGPHTIC
LTSTNGKCQAW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023509DTD-like_sf
IPR003732Daa-tRNA_deacyls_DTD