Ggra6580.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6580.t1
Unique NameGgra6580.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length470
Homology
BLAST of Ggra6580.t1 vs. uniprot
Match: A0A2V3IK64 (Polyadenylate-binding protein RBP45A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK64_9FLOR)

HSP 1 Score: 778 bits (2009), Expect = 1.510e-280
Identity = 395/470 (84.04%), Postives = 422/470 (89.79%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNGTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHGPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPPSVANTDMPVMNYESGTQSFDPQFSSSYASNVSGANNPMPEGFNNFNSMPNGSSATPGSNSTVAGLSQPQP-GSVEQNKVSAADTGAVSSIQPTASVVKDGAGATENANSNGSGEAEPPSKRAAVDRPEYAAVATDNTPKKENGMDVKTEAPSGDSPAMQFSWLNSSSTQPTTSPQ 469
            MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVN +A TEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFA+AHDA+RAVNEMQGFEFNNKPIRLSHATGRSRGPN+                NGAGHGPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFS+FGELDGVRVPVNKT FAFVRFKTRE+A+RAKESLSGTHFPPLNAHKPIRVEWASERIPATKPPS+ NT MPVMNY+S +QSFDPQFSSSYA N   +N+ + EGFNNFNS+PNGSS  P S++ VAGLSQPQP  SVE+NKVSAAD   V+S+QP+A V K+    +EN NSNGSGEAEPPSKRAAV R EYAAVATD+TPKKENG++VK+E PSGDSPAMQFSWLNSSSTQPTT+ Q
Sbjct:   65 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNSSANTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFANAHDADRAVNEMQGFEFNNKPIRLSHATGRSRGPNTRGPTHHPYNNHHNTPSNGAGHGPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSSFGELDGVRVPVNKTGFAFVRFKTREAALRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPPSLVNTSMPVMNYDSNSQSFDPQFSSSYALNNPASNSSIQEGFNNFNSIPNGSSTAPVSSTAVAGLSQPQPPASVEENKVSAADGATVASVQPSAPVSKETPVTSENGNSNGSGEAEPPSKRAAVGRGEYAAVATDSTPKKENGIEVKSEGPSGDSPAMQFSWLNSSSTQPTTNSQ 534          
BLAST of Ggra6580.t1 vs. uniprot
Match: R7QS10 (Putative mRNA binding post-transcriptional regulator (Csx1) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS10_CHOCR)

HSP 1 Score: 530 bits (1365), Expect = 1.100e-180
Identity = 311/499 (62.32%), Postives = 348/499 (69.74%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVN----GTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXX-NGAGHGPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPPSVANTDMPVMNYESG--TQSFDPQFSSSYASNVSGANNPMPEGFNNFNSMPNGSSATPGS-----------------------NSTVAGLSQPQPGSVEQNKVSAADTGAVSSIQPTASVVKDGAGATENANSNGSGEAEPPSKRAAVDRPEYAAVATDNTPKKENGMDVKTEAPSGDSPAMQFSWLNSSSTQPTTSPQ 469
            MDENFLRQAV ASGW  DITRIKVVRDHY+GMHAGYGFLDAASPEAA+RVIA GSG+PIPGTNRCWRLNMGRNAAV+      AGTEINIYVGNLEPSVTDYQLMTAFRPRY SVRHAKVVCNEYGQSRG+GFVRFA+  DAERAV+EMQGFEFN+KPIRLS ATGR+RGP +   XXXXXX        +  GHG P NKRPRQ+M+PDDP NTTIFIGGT  HIT++LLWREFS FGELD VRVPVNKT FAFVRFK RE A RAKE LSG+H+  LN +KP+RVEWASE+I  TKPP V N  MP+M Y SG   QSFDPQ++ S  +N  G N    +        P GS ++P S                       NST  G+++    S   +  S A            S  KDGA A  +A+    GE EPPSKRAAV RPEY     DN   KE   D K    + DSPAMQFSWLN+SSTQP ++PQ
Sbjct:  203 MDENFLRQAVAASGWAQDITRIKVVRDHYTGMHAGYGFLDAASPEAAERVIATGSGLPIPGTNRCWRLNMGRNAAVHTHPGSAAGTEINIYVGNLEPSVTDYQLMTAFRPRYTSVRHAKVVCNEYGQSRGFGFVRFANPQDAERAVSEMQGFEFNSKPIRLSPATGRNRGPGAGRGXXXXXXYNNHGQPPHSGGHGAPNNKRPRQVMSPDDPNNTTIFIGGTGNHITEDLLWREFSAFGELDAVRVPVNKTGFAFVRFKRREDAQRAKEELSGSHYVTLNPNKPVRVEWASEQIAITKPPPVQN--MPLM-YSSGGAAQSFDPQYNPSTYNNSPGVNQAPGQ-------HPFGSYSSPSSQXXXXXXXXXXXXXXXXXXXXSMNSTANGVTKNDESSTGNDMTSGA------------SPAKDGATAKADAH----GETEPPSKRAAVGRPEYTGSGADNG-VKEGLNDTKAAGVADDSPAMQFSWLNASSTQPASNPQ 674          
BLAST of Ggra6580.t1 vs. uniprot
Match: A0A7S1TAX1 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAX1_9RHOD)

HSP 1 Score: 301 bits (772), Expect = 1.180e-93
Identity = 157/350 (44.86%), Postives = 216/350 (61.71%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRN-------------------AAVNGTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHGPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPP-------SVANTDM-PVMNYESGTQSFDPQFSSSYA 323
            MDE FLR AV   GWGPDI+RIKVVRD  +G HAGYGF +  + EAA++++  G+G+PIPGTNR WRLNMGR+                   +AV+     + N+YVG+L+ +VT+++L++AFR +Y SV+HA+++C+++G+SRG+ F+RF DA DA++AV EM G E   + I+++H   RS                     +G  +G    KRPR     DDP N+T+F+GGT  HITDE+L+REF  FGE++ V+VPVNK  FAFVRFK RE A+RA ESL+G     LN  K +R+EWASE++P    P        V+ T M P M     T  FD  + +S A
Sbjct:  121 MDETFLRSAVNVMGWGPDISRIKVVRDRSNGTHAGYGFFETTTTEAARKLLTSGNGLPIPGTNRSWRLNMGRSGGSSGDGTASLGFQGRPEGSAVSSQRSGDANVYVGDLDAAVTEFELLSAFRLKYASVKHARILCDDHGRSRGFAFIRFGDAEDADKAVEEMNGQEIRGRAIKVNHPKSRS---------------GVGDPSSGTSNGAAPGKRPRPNHGKDDPNNSTVFVGGTGAHITDEVLYREFGRFGEIETVKVPVNKVGFAFVRFKNREDALRAIESLTGKLVDSLNHQKAVRLEWASEQLPIPNRPVPAVSHAPVSQTSMVPTMIAAPQTMGFDQNYMASLA 455          
BLAST of Ggra6580.t1 vs. uniprot
Match: A0A7S0G195 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G195_9RHOD)

HSP 1 Score: 285 bits (729), Expect = 2.450e-88
Identity = 149/306 (48.69%), Postives = 191/306 (62.42%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVV-RDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNGTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHGPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPPSVANTDMPVM 305
            MDE+FLR+AV + GWG  I RIKVV R+H +  HAGY F D  S EAA+ ++  G+G PIPGT R WRLN+G+       +G E N+YVG++ PSVTD+ LM  F+ +Y SVRHAKVVC++ G  +GY FVRF  A ++ERAV+EM GFE   K + L+ A       N                 +  G    + KRPR  +AP DP NTT+F+GGT P++ +  LWREFS FGEL  VR+PV +  FAFVRF+TRESAM AK +L G H   LN  KPIR+EWA+E+I     P      +P M
Sbjct:   62 MDEDFLRRAVNSCGWGNQIARIKVVTRNHGNRAHAGYAFFDCVSEEAARTIMETGNGTPIPGTTRIWRLNLGKEGPQR--SGIEANVYVGDVAPSVTDFALMQLFKAKYPSVRHAKVVCDDNGNPKGYAFVRFGSAQESERAVSEMDGFELEGKKVHLNLA-------NRPKPSRGDRRNSSNYGSSRGGRAGASGKRPRNPIAPGDPNNTTLFLGGTGPYLQEADLWREFSVFGELIAVRLPVQRKGFAFVRFRTRESAMNAKNALGGQHVASLNNVKPIRIEWATEQIEPQVNPMQYQFALPAM 358          
BLAST of Ggra6580.t1 vs. uniprot
Match: A0A5J4YRZ5 (Polyadenylate-binding protein RBP47C n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRZ5_PORPP)

HSP 1 Score: 240 bits (613), Expect = 8.880e-70
Identity = 138/327 (42.20%), Postives = 183/327 (55.96%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGR---------------------NAAVNGTA-------------GTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHGPPTNKRPRQLMAPDDPTN---TTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIP 290
            MDE FL  AV ++GW   + R+KV+R   SG HAGYGFL   S EAAQ +I  G+G+PI  TNR WRL MGR                     N A +G A              TE N+YVG+L+P+V+DY+L+  FR R+ SVRHAKV+C+E GQSRGYGF+RF+   DA+ AV    G     +PIR++ A   S G ++                NG  H     +R  Q   P   T+   TT+F+GGT P I +  LW EFS  G +  V++P++KT FAFVRF TR  A  AK +L+ +  P +N H+ IRVEWA+E++P
Sbjct:  161 MDERFLTNAVASAGWTEHVQRVKVIR-RSSGAHAGYGFLVVHSMEAAQHIIQFGNGLPIAMTNRSWRLQMGRVSGGSGDDVGMDQMQQHGQHWNRAASGDAVAGDAAGRGGWQPATEANLYVGDLDPAVSDYELLNYFRARFASVRHAKVMCDEVGQSRGYGFIRFSSMADAQEAVKLFNGTMIRGRPIRVNLAHRSSGGQSNDSRGGGGGNV------NGGTHPNGPKRRRDQGSVPSGVTDESITTLFVGGTIPSIQEGTLWEEFSAHGTVQAVKLPISKTGFAFVRFATRADAESAKNALNMSSVPSINPHRAIRVEWAAEQLP 480          
BLAST of Ggra6580.t1 vs. uniprot
Match: A0A5J4YS19 (Polyadenylate-binding protein RBP47C n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS19_PORPP)

HSP 1 Score: 231 bits (590), Expect = 1.880e-68
Identity = 130/295 (44.07%), Postives = 176/295 (59.66%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNG--TAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHGPPTNKRPRQLMAPDDPTN---TTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIP 290
            MDE FL  AV ++GW   + R+KV+R   SG HAGYGFL   S EAAQ +I  G+G+PI  TN      +  +AA  G     TE N+YVG+L+P+V+DY+L+  FR R+ SVRHAKV+C+E GQSRGYGF+RF+   DA+ AV    G     +PIR++ A   S G ++                NG  H     +R  Q   P   T+   TT+F+GGT P I +  LW EFS  G +  V++P++KT FAFVRF TR  A  AK +L+ +  P +N H+ IRVEWA+E++P
Sbjct:   17 MDERFLTNAVASAGWTEHVQRVKVIR-RSSGAHAGYGFLVVHSMEAAQHIIQFGNGLPIAMTN------LAGDAAGRGGWQPATEANLYVGDLDPAVSDYELLNYFRARFASVRHAKVMCDEVGQSRGYGFIRFSSMADAQEAVKLFNGTMIRGRPIRVNLAHRSSGGQSNDSRGGGGGNV------NGGTHPNGPKRRRDQGSVPSGVTDESITTLFVGGTIPSIQEGTLWEEFSAHGTVQAVKLPISKTGFAFVRFATRADAESAKNALNMSSVPSINPHRAIRVEWAAEQLP 298          
BLAST of Ggra6580.t1 vs. uniprot
Match: B8MTZ4 (mRNA binding post-transcriptional regulator (Csx1), putative n=8 Tax=Eurotiales TaxID=5042 RepID=B8MTZ4_TALSN)

HSP 1 Score: 167 bits (423), Expect = 1.380e-43
Identity = 112/320 (35.00%), Postives = 171/320 (53.44%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNM--GRNAAVNGT--AGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEY-GQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHGPPTN--KRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERI----------PATKPPSVANTDMP 303
            +DENF+R      G   +   +K++RD +SG +AGY F+D ASP AA + ++  +G P+P T R ++LN   G   A  G    G E +I+VG+L P V +Y L++ F+ R+ S + AK++ +   G SRGYGFVRF+D +D +RA++EMQG    N+P+R+S AT +++GP                     G GPP      P+ +    DP NTT+F+GG + ++T++ L   F  FGE+  V++P  K    FV+F  R +A  A   + G  +P  N+   +R+ W   +           PA  PP   N  MP
Sbjct:   70 IDENFIRNLWFQMG---EQVNVKMIRDKFSGSNAGYCFVDFASPAAAAKALSL-NGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMG-GPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK-GCGFVQFVQRHAAEMAINQMQG--YPIGNSR--VRLSWGRSQNNSGPAGTPYRPAPPPPIYPNMGMP 379          
BLAST of Ggra6580.t1 vs. uniprot
Match: A0A6I9RBN6 (polyadenylate-binding protein RBP45 n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RBN6_ELAGV)

HSP 1 Score: 166 bits (420), Expect = 8.180e-43
Identity = 105/298 (35.23%), Postives = 153/298 (51.34%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVN--GTAGTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEY-GQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHGPPTNKRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPP 295
            MDEN+L      SG   ++  +K++R+  +G   GYGF++ A+  +A+RV+   +G  +P   + +RLN   + +    G  G +  I+VG+L   VTDY L   F+ RY SV+ AKVV +   G+S+GYGFVRF D ++  RA+ EM G   +++P+R+  A  +  G                   N                   DP NTTIF+GG  P++TD+LL + FS +GEL  V++PV K    FV+FK R  A  A   L+GT     N    IR+ W   R PA K P
Sbjct:  106 MDENYLYGCFVQSG---EVLSVKIIRNKQTGQSEGYGFIEFATRASAERVLQTYNGQMMPNVEQTFRLNWATSGSGERRGDEGADYTIFVGDLASDVTDYLLQETFKNRYSSVKGAKVVSDRITGRSKGYGFVRFGDLNEQTRAMTEMNGVYCSSRPMRIGPAANKKAGAQQYSTNASYPTTPGTESEN-------------------DPNNTTIFVGGLDPNVTDDLLRQVFSPYGELVYVKIPVGKRC-GFVQFKIRSCAEEALRMLNGTQLGGQN----IRLSWG--RSPANKQP 374          
BLAST of Ggra6580.t1 vs. uniprot
Match: V5GGR6 (mRNA binding post-transcriptional regulator n=3 Tax=Eurotiales TaxID=5042 RepID=V5GGR6_BYSSN)

HSP 1 Score: 165 bits (417), Expect = 1.390e-42
Identity = 108/320 (33.75%), Postives = 170/320 (53.12%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNMGRNAAVNGTA----GTEINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEY-GQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHGPPTN--KRPRQLMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERI----------PATKPPSVANTDMP 303
            +DENF+R      G   +   +K++RD +SG +AGY F+D +SP AA + ++  +G PIP T R ++LN      +   +    G E +I+VG+L P V +Y L++ F+ R+ S + AK++ +   G SRGYGFVRF+D +D +RA+ EMQG    N+P+R+S AT +++GP +                   G GPP      P+ +    DP NTT+F+GG + ++T++ L   F  FGE+  V++P  K    FV+F  R +A  A   + G  +P  N+   +R+ W   +           PA  PP   +  MP
Sbjct:   76 IDENFIRNLWFQMG---EQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKALSL-NGTPIPNTTRPFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPKNKGPGAGPGAMGMPGAPAGLYPPAMG-GPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK-GCGFVQFVQRHAAEMAINQMQG--YPIGNSR--VRLSWGRSQNNSGPAGTPYRPAPPPPIYPSMGMP 385          
BLAST of Ggra6580.t1 vs. uniprot
Match: A0A197JCD1 (RNA-binding domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JCD1_9FUNG)

HSP 1 Score: 165 bits (417), Expect = 2.150e-42
Identity = 112/310 (36.13%), Postives = 169/310 (54.52%), Query Frame = 0
Query:    1 MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRVIACGSGMPIPGTNRCWRLNM--GRNAAVNGTAGT-EINIYVGNLEPSVTDYQLMTAFRPRYGSVRHAKVVCNEY-GQSRGYGFVRFADAHDAERAVNEMQGFEFNNKPIRLSHATGRSRGPNSXXXXXXXXXXXXXXXXNGAGHG--PPTNKRPRQ--LMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAFVRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPPSVANTDM 302
            MDEN++R A  ++G   +   +K++RD ++G+ AGY F++ +SP AA + I   +G+ IPGTN+ ++LN   G N A+ G  G  E +++VG+L P VT+Y L+  F+ RY S R AK++ +   G SRGYGFVRF D  +  RA++EMQG    ++PIR+S AT +++ P                    AG+G  PP      Q  L    DP NTT+F+GG +    ++ L   F+ FGE+  V++P  K    FV+F  R+SA  A   L+G           +R+ W   +    KP S  N+ M
Sbjct:   45 MDENWIRGAWYSAG---EQVSVKMIRDKFTGVSAGYCFVELSSPAAAAKAINTLNGVLIPGTNKIFKLNWASGGNVAMPGAGGAQEYSVFVGDLSPEVTEYMLVATFQERYMSCRSAKIMTDPTTGLSRGYGFVRFGDESEQLRALHEMQGVYCGSRPIRISMATPKNKVPAGGMGGAGSVGMGGGMNMAPAGYGYLPPAQPTSPQHTLNQFTDPNNTTVFVGGLSGVNHEDELRNVFAAFGEITYVKIPPGK-GCGFVQFVHRQSAEMAINQLNGYQI----GSSRVRLSWGRAQN-EPKPMSPLNSSM 345          
The following BLAST results are available for this feature:
BLAST of Ggra6580.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK641.510e-28084.04Polyadenylate-binding protein RBP45A n=1 Tax=Graci... [more]
R7QS101.100e-18062.32Putative mRNA binding post-transcriptional regulat... [more]
A0A7S1TAX11.180e-9344.86Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0G1952.450e-8848.69Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YRZ58.880e-7042.20Polyadenylate-binding protein RBP47C n=1 Tax=Porph... [more]
A0A5J4YS191.880e-6844.07Polyadenylate-binding protein RBP47C n=1 Tax=Porph... [more]
B8MTZ41.380e-4335.00mRNA binding post-transcriptional regulator (Csx1)... [more]
A0A6I9RBN68.180e-4335.23polyadenylate-binding protein RBP45 n=3 Tax=Arecac... [more]
V5GGR61.390e-4233.75mRNA binding post-transcriptional regulator n=3 Ta... [more]
A0A197JCD12.150e-4236.13RNA-binding domain-containing protein n=1 Tax=Linn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 85..158
e-value: 4.1E-23
score: 92.8
coord: 211..283
e-value: 2.0E-11
score: 54.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 212..271
e-value: 8.9E-11
score: 41.5
coord: 86..156
e-value: 1.2E-19
score: 69.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 210..287
score: 15.32331
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 84..162
score: 18.717335
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 72..176
e-value: 1.6E-24
score: 88.4
coord: 177..293
e-value: 7.6E-19
score: 70.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..71
e-value: 3.5E-8
score: 35.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..389
NoneNo IPR availablePANTHERPTHR47640TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATEDcoord: 1..319
NoneNo IPR availablePANTHERPTHR47640:SF10TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATEDcoord: 1..319
NoneNo IPR availableCDDcd00590RRM_SFcoord: 212..283
e-value: 8.44171E-14
score: 64.2485
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 175..293
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 83..189
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:332363..333772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6580.t1Ggra6580.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 332363..333772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6580.t1 ID=Ggra6580.t1|Name=Ggra6580.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=470bp
MDENFLRQAVTASGWGPDITRIKVVRDHYSGMHAGYGFLDAASPEAAQRV
IACGSGMPIPGTNRCWRLNMGRNAAVNGTAGTEINIYVGNLEPSVTDYQL
MTAFRPRYGSVRHAKVVCNEYGQSRGYGFVRFADAHDAERAVNEMQGFEF
NNKPIRLSHATGRSRGPNSRGPAHHGYNNHHHTPHNGAGHGPPTNKRPRQ
LMAPDDPTNTTIFIGGTAPHITDELLWREFSTFGELDGVRVPVNKTSFAF
VRFKTRESAMRAKESLSGTHFPPLNAHKPIRVEWASERIPATKPPSVANT
DMPVMNYESGTQSFDPQFSSSYASNVSGANNPMPEGFNNFNSMPNGSSAT
PGSNSTVAGLSQPQPGSVEQNKVSAADTGAVSSIQPTASVVKDGAGATEN
ANSNGSGEAEPPSKRAAVDRPEYAAVATDNTPKKENGMDVKTEAPSGDSP
AMQFSWLNSSSTQPTTSPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf