Ggra6573.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6573.t1
Unique Name	Ggra6573.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	130

Homology

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BLAST of Ggra6573.t1 vs. uniprot
Match: R7QRQ3 (40S ribosomal protein S15a n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QRQ3_CHOCR)

HSP 1 Score: 247 bits (631), Expect = 6.790e-83
Identity = 120/129 (93.02%), Postives = 124/129 (96.12%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            MRMSVL D+LKTL+NAEKRGKRQVLLRPSSKV+IKFLQVMQ HGYIGEFE VDDHRAGKIVVNLIGRLNKCGVISPRFDV V EIEKWVTNLLPSRQFGFI+LTTSYGIMDHEEARRKHTGGKILGFFY
Sbjct:    1 MRMSVLGDALKTLANAEKRGKRQVLLRPSSKVIIKFLQVMQTHGYIGEFEVVDDHRAGKIVVNLIGRLNKCGVISPRFDVSVNEIEKWVTNLLPSRQFGFIMLTTSYGIMDHEEARRKHTGGKILGFFY 129

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BLAST of Ggra6573.t1 vs. uniprot
Match: A0A1X6NLV8 (Uncharacterized protein n=2 Tax=Bangiaceae TaxID=31345 RepID=A0A1X6NLV8_PORUM)

HSP 1 Score: 241 bits (614), Expect = 2.750e-80
Identity = 116/129 (89.92%), Postives = 122/129 (94.57%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVL D+LKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQ HGYIGEFE+VDDHRAGKIVVNLIGRLNKCGVISPRFD+ VG IE WV NLLPSRQFG+I+LTTSYGIMDHEEAR KHTGGKILGFFY
Sbjct:    2 VRMSVLGDALKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQTHGYIGEFEYVDDHRAGKIVVNLIGRLNKCGVISPRFDIKVGSIENWVNNLLPSRQFGYIMLTTSYGIMDHEEARAKHTGGKILGFFY 130

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BLAST of Ggra6573.t1 vs. uniprot
Match: A0A7S1TD80 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD80_9RHOD)

HSP 1 Score: 235 bits (600), Expect = 3.750e-78
Identity = 110/129 (85.27%), Postives = 123/129 (95.35%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD+L+T+SNAEKRGKRQV+LRPSSKV+IKFLQVMQ HGY+GEFE VDDHRAGKIVV+L GR+NKCG ISPR+D+ VGEIEKWV NLLPSRQFG+I+LTTSYGIMDHEEARRKHTGGKILGFFY
Sbjct:    2 VRMSVLADALRTMSNAEKRGKRQVMLRPSSKVLIKFLQVMQKHGYLGEFEIVDDHRAGKIVVHLTGRINKCGAISPRYDIKVGEIEKWVNNLLPSRQFGYIMLTTSYGIMDHEEARRKHTGGKILGFFY 130

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BLAST of Ggra6573.t1 vs. uniprot
Match: A0A7S0G592 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G592_9RHOD)

HSP 1 Score: 234 bits (597), Expect = 1.080e-77
Identity = 112/129 (86.82%), Postives = 121/129 (93.80%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLADSLKTLSNAEK+GKRQVL+RPSSKVVIKFLQVMQ HGYIGEFEFVDDHR GK+VV L GRLNKC VISPR+D+ V EIEKWV NLLPSRQFG+I+L+TSYGIMDHEEARRKHTGGKILGFFY
Sbjct:    2 VRMSVLADSLKTLSNAEKKGKRQVLIRPSSKVVIKFLQVMQKHGYIGEFEFVDDHRGGKVVVILTGRLNKCRVISPRYDISVKEIEKWVNNLLPSRQFGYIILSTSYGIMDHEEARRKHTGGKILGFFY 130

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BLAST of Ggra6573.t1 vs. uniprot
Match: M2XL41 (40S ribosomal protein S15A n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XL41_GALSU)

HSP 1 Score: 229 bits (585), Expect = 7.280e-76
Identity = 107/129 (82.95%), Postives = 123/129 (95.35%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD+L +++NAE+RGKRQVLLRPSSKV+I+FLQVMQ HGYIGEFE VDDHR+GK+VV+LIGRLNKCGVISPR+DV V E+E+W +NLLPSRQFGF+VLTTSYGIMDHEEARRKHTGGKILGFFY
Sbjct:    2 VRMSVLADALNSIANAERRGKRQVLLRPSSKVIIRFLQVMQKHGYIGEFELVDDHRSGKLVVHLIGRLNKCGVISPRYDVKVHEMEQWASNLLPSRQFGFVVLTTSYGIMDHEEARRKHTGGKILGFFY 130

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BLAST of Ggra6573.t1 vs. uniprot
Match: A0A7S3PA85 (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PA85_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.470e-75
Identity = 108/129 (83.72%), Postives = 120/129 (93.02%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD+LKT+SNAEKRGKRQVLLRPSSKV++KFLQ MQ HGYIGEFE VDDHR+GKIVV L GR+NKCGV+SPRFDV V ++EKWV NLLPSRQFG IVLTT+YGIMDHEEARRKHTGGK+LGFFY
Sbjct:    2 VRMSVLADALKTMSNAEKRGKRQVLLRPSSKVIVKFLQCMQKHGYIGEFEIVDDHRSGKIVVELNGRINKCGVVSPRFDVQVKDMEKWVGNLLPSRQFGHIVLTTAYGIMDHEEARRKHTGGKVLGFFY 130

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BLAST of Ggra6573.t1 vs. uniprot
Match: A0A8E8PJK2 (Ribosomal protein S15A n=2 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8PJK2_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.210e-74
Identity = 108/129 (83.72%), Postives = 120/129 (93.02%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD+LKTLSNAEKRGKRQVLLRPSSKV+IKFLQVMQ +GY+GEFE VDD RAGKIVVNL GR+NKCGVISPRFDV V ++EKWV NLLPSRQFG +VLTTS GIMDHEEAR++HTGGK+LGFFY
Sbjct:    2 VRMSVLADALKTLSNAEKRGKRQVLLRPSSKVIIKFLQVMQKNGYVGEFELVDDRRAGKIVVNLTGRINKCGVISPRFDVPVKDMEKWVANLLPSRQFGHVVLTTSQGIMDHEEARKRHTGGKVLGFFY 130

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BLAST of Ggra6573.t1 vs. uniprot
Match: A0A836CHB7 (Ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB7_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.710e-74
Identity = 106/129 (82.17%), Postives = 119/129 (92.25%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD+LKTLSNAEKRGKRQVL+RPSSKVV+KFLQ MQ HGYIGEFE VDDHRAGKIV+ L GR+NKCGVISPRFDV + +IEKW+ NLLP+R FG IVL+T+YGIMDHEEARRKHTGGK+LGFFY
Sbjct:    2 VRMSVLADTLKTLSNAEKRGKRQVLIRPSSKVVVKFLQCMQKHGYIGEFEIVDDHRAGKIVIELTGRINKCGVISPRFDVPLADIEKWMVNLLPARGFGHIVLSTTYGIMDHEEARRKHTGGKVLGFFY 130

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BLAST of Ggra6573.t1 vs. uniprot
Match: B2YI15 (Putative 40S ribosomal protein RPS15A n=3 Tax=Lophotrochozoa TaxID=1206795 RepID=B2YI15_9BILA)

HSP 1 Score: 226 bits (575), Expect = 2.440e-74
Identity = 107/129 (82.95%), Postives = 119/129 (92.25%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RM+VLAD+LK++ NAEKRGKRQVLLRPSSKV+I+FLQVM  HGYIGEFE +DDHRAGKIVVNL GRLNKCGVISPRFDV + ++EKW TNLLPSRQFGFIVLTTS GIMDHEEARRKH GGKILGFF+
Sbjct:    2 VRMNVLADALKSICNAEKRGKRQVLLRPSSKVIIRFLQVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVALRDMEKWTTNLLPSRQFGFIVLTTSGGIMDHEEARRKHLGGKILGFFF 130

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BLAST of Ggra6573.t1 vs. uniprot
Match: A0A812JFE9 (RPS15A protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812JFE9_9DINO)

HSP 1 Score: 226 bits (575), Expect = 2.440e-74
Identity = 108/129 (83.72%), Postives = 119/129 (92.25%), Query Frame = 0

Query:    1 MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFEFVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGFIVLTTSYGIMDHEEARRKHTGGKILGFFY 129
            +RMSVLAD LKT+ NAEKRGKRQVL+RP+SKV++KFLQVMQ HGYIG+FE VDDHRAGKIVV L GR+NKCGVISPRFDV V EIEKW+++LLPSRQFG IVLTTS GIMDHEEARRKHTGGKILGFFY
Sbjct:    2 VRMSVLADCLKTIYNAEKRGKRQVLVRPASKVIVKFLQVMQKHGYIGDFELVDDHRAGKIVVQLTGRINKCGVISPRFDVTVPEIEKWISSLLPSRQFGHIVLTTSAGIMDHEEARRKHTGGKILGFFY 130

The following BLAST results are available for this feature:

BLAST of Ggra6573.t1 vs. uniprot

BLAST of Ggra6573.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
R7QRQ3	6.790e-83	93.02	40S ribosomal protein S15a n=2 Tax=Rhodymeniophyci...	[more]
A0A1X6NLV8	2.750e-80	89.92	Uncharacterized protein n=2 Tax=Bangiaceae TaxID=3...	[more]
A0A7S1TD80	3.750e-78	85.27	Hypothetical protein n=1 Tax=Compsopogon caeruleus...	[more]
A0A7S0G592	1.080e-77	86.82	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
M2XL41	7.280e-76	82.95	40S ribosomal protein S15A n=1 Tax=Galdieria sulph...	[more]
A0A7S3PA85	1.470e-75	83.72	Hypothetical protein n=1 Tax=Aplanochytrium stocch...	[more]
A0A8E8PJK2	1.210e-74	83.72	Ribosomal protein S15A n=2 Tax=Placidida sp. TaxID...	[more]
A0A836CHB7	1.710e-74	82.17	Ribosomal protein S8 n=1 Tax=Tribonema minus TaxID...	[more]
B2YI15	2.440e-74	82.95	Putative 40S ribosomal protein RPS15A n=3 Tax=Loph...	[more]
A0A812JFE9	2.440e-74	83.72	RPS15A protein n=2 Tax=Sar TaxID=2698737 RepID=A0A...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 6..129 e-value: 2.0E-20 score: 73.0
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 2..129
IPR000630	Ribosomal protein S8	PROSITE	PS00053	RIBOSOMAL_S8	coord: 99..116
IPR000630	Ribosomal protein S8	HAMAP	MF_01302_A	Ribosomal_S8_A	coord: 1..129 score: 31.773045
None	No IPR available	GENE3D	3.30.1370.30		coord: 1..68 e-value: 6.7E-34 score: 117.6
None	No IPR available	GENE3D	3.30.1490.10		coord: 69..129 e-value: 9.7E-37 score: 126.3
None	No IPR available	PANTHER	PTHR11758:SF39	OS02G0478600 PROTEIN	coord: 2..129
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 1..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000081_pilon	contig	tig00000081_pilon:308625..309014 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6573.t1	Ggra6573.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000081_pilon 308625..309014 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6573.t1 ID=Ggra6573.t1|Name=Ggra6573.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=130bp
MRMSVLADSLKTLSNAEKRGKRQVLLRPSSKVVIKFLQVMQNHGYIGEFE
FVDDHRAGKIVVNLIGRLNKCGVISPRFDVGVGEIEKWVTNLLPSRQFGF
IVLTTSYGIMDHEEARRKHTGGKILGFFY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000630	Ribosomal_S8
IPR035987	Ribosomal_S8_sf