Ggra6575.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6575.t1
Unique NameGgra6575.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length159
Homology
BLAST of Ggra6575.t1 vs. uniprot
Match: A0A2V3IK71 (Thiosulfate sulfurtransferase 16, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK71_9FLOR)

HSP 1 Score: 156 bits (395), Expect = 1.770e-46
Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 0
Query:   49 LSPQALNDKMTQSSTAVYVDVRTPAEFAAGHIPRALNVSLTTHDMKPLPSFVDDFRAAVGDTTEVIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPI 156
            LSP+ ++D+MT SS A+YVDVRTP EFA GHIP A+NV LTT DMKPLPSFVDDFRAAVGD +++IVGCKSGKRSS AIT+L +AG + L+ELEGGF SW  DS LP+
Sbjct:   19 LSPREVHDRMTNSS-AIYVDVRTPTEFAEGHIPDAINVPLTTPDMKPLPSFVDDFRAAVGDASDIIVGCKSGKRSSNAITQLHQAGFKQLLELEGGFSSWLEDSNLPV 125          
BLAST of Ggra6575.t1 vs. uniprot
Match: R7QPY2 (Rhodanese domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPY2_CHOCR)

HSP 1 Score: 89.7 bits (221), Expect = 2.600e-18
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 0
Query:   39 HRAVHTMAAKLSPQALNDKMTQSSTAVYVDVRTPAEFAAGHIPRALNVSLTTHDMKPLPSFVDDFRAAVGDTTEVIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPI 156
            HRA   M +  SP A  +++ +     Y+DVRTP EF AGH P A+NV +T    KP+ +FV +         +++VGCK+G RS +AI  L +AG + L  +EGG+ +W A S LP+
Sbjct:  236 HRAPSAMFSSASPAAAFERLQEQYPPQYLDVRTPPEFQAGHPPGAVNVPVTLDFTKPVDTFVQNVADLFPKDADLLVGCKTGARSMMAIGLLEKAGFEKLTNVEGGYNAWNAAS-LPL 352          
BLAST of Ggra6575.t1 vs. uniprot
Match: A0A2J7ZSM1 (Thiosulfate sulfurtransferase 16, chloroplastic n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZSM1_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 5.160e-17
Identity = 56/135 (41.48%), Postives = 74/135 (54.81%), Query Frame = 0
Query:   24 ARKSLSPVCPRTLVLHRAVHTMAAKLSPQALNDKMTQSSTAVYVDVRTPAEFAAGHIPRALNVSLTTHDMKPLPSFVDDFRAAVGDTTE-VIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPIE 157
            AR +L P   R L + RA  +       Q L     ++    Y+DVRTPAEF+AGH P A+NV +        P FV   + A  D  E ++VGCK+G+RS  AI  LS+AG   L+ L GGF+ WAA   LP+E
Sbjct:   15 ARPALLPSGRRPLHVTRATSSTVMPAEAQEL----IKAEGYKYLDVRTPAEFSAGHAPAAVNVDVFD------PDFVAGVQRAFPDKAESLLVGCKAGRRSLTAIGLLSQAGYTDLVNLTGGFDLWAAQG-LPLE 138          
BLAST of Ggra6575.t1 vs. uniprot
Match: A0A8J4C9D5 (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C9D5_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 7.290e-17
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 0
Query:   19 ASRRLARKSLSPVCP------RTLVLHRAVHTMAA---KLSPQALNDKMTQSSTAVYVDVRTPAEFAAGHIPRALNVSLTT--HDMKPLPSFVDDFRAAVGDTTE-VIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPIEQ 158
            A    +R      CP      R L   R++H   A   K +  A   +M Q     Y+DVRT  E+ AGH P A+NV +      M P P+F+ + + A     E ++VGCKSG+RS +AI  LS+AG   L+ L GGF+ WAA   LP+++
Sbjct:    3 ARSTFSRHIFKTACPTFNATQRALRAGRSIHVTRAVQYKDAMPAEAQQMLQDEGYKYLDVRTAEEYVAGHAPSAINVPVVFLGSGMSPNPAFLSEVQRAFPKKDESLVVGCKSGRRSLMAIELLSQAGYCNLVNLTGGFDLWAAQG-LPVDK 153          
BLAST of Ggra6575.t1 vs. uniprot
Match: A0A8J4BFX3 (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BFX3_9CHLO)

HSP 1 Score: 82.0 bits (201), Expect = 7.290e-17
Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   33 PRTLVLHRAVHTMAAKLSPQALNDK---MTQSSTAVYVDVRTPAEFAAGHIPRALNVSLTTHD--MKPLPSFVDDFRAAVGDTTE-VIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPIEQ 158
            PR +   R++H   A     A+  +   + Q     Y+DVRT  E+AAGH P A NV +      M P P+F+ + +       E ++VGCKSG+RS +AI +LS+AG   L+ L GGF+ WAA   LP+E+
Sbjct:   23 PRAVQAGRSIHVTRAVQYKDAMPAEAHLLLQDEGYKYLDVRTAEEYAAGHTPSATNVPVVFLGIGMSPNPAFLSEVQRVFPKKDESLVVGCKSGRRSLMAIEQLSQAGYSNLVNLVGGFDLWAAQG-LPVEK 153          
BLAST of Ggra6575.t1 vs. uniprot
Match: D8U237 (Rhodanese domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U237_VOLCA)

HSP 1 Score: 80.5 bits (197), Expect = 2.940e-16
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0
Query:   66 YVDVRTPAEFAAGHIPRALNVS---LTTHDMKPLPSFVDDFRAAVGDTTE-VIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPIEQ 158
            Y+DVRT  EF+AGH P A+NV    L +  M P P+F+ D +       E ++VGCKSG+RS +AI  +S+AG   L+ + GGF+ WAA   LP+E+
Sbjct:   59 YLDVRTAEEFSAGHAPSAVNVPVVFLGSGGMSPNPAFLSDVQRVFPKKDEALVVGCKSGRRSLMAIDAMSQAGYSNLVNVVGGFDLWAAQG-LPVER 154          
BLAST of Ggra6575.t1 vs. uniprot
Match: A0A835WJN2 (Rhodanese domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WJN2_9CHLO)

HSP 1 Score: 79.0 bits (193), Expect = 9.800e-16
Identity = 60/159 (37.74%), Postives = 79/159 (49.69%), Query Frame = 0
Query:    5 LIRAAARPAFVVLPASRRLARKSLSPVCPRTLVLHRAVHTMAAKLSPQALNDKMTQS---STAVYVDVRTPAEFAAGHIPRALNVSLTTHD---MKPLPSFVDDFRAAVGDTTE-VIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPI 156
            L R+ ARPA       R +A + L   CP          +M     PQ +  K  Q        Y+DVRT  E+AAGH P ++NV +       M P P F+    AA  D  E ++VGCKSG+RS +AI  LS+AG   L+ L GGF+ WA    LP+
Sbjct:    2 LARSIARPATF----GRAVAARRLHVSCP----------SMRQVPIPQDVMPKQAQELLQEDYKYLDVRTTEEYAAGHAPASVNVPVVNFGPAGMVPNPGFLQAVEAAFPDKQERLVVGCKSGRRSMMAIDLLSQAGYCELVNLAGGFDLWAGQG-LPV 145          
BLAST of Ggra6575.t1 vs. uniprot
Match: A0A3M1E5Q4 (Rhodanese-like domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1E5Q4_9BACT)

HSP 1 Score: 77.4 bits (189), Expect = 2.960e-15
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 0
Query:   48 KLSPQALNDKMTQSSTAVYVDVRTPAEFAAGHIPRALNVSLT-----THDMKPLPSFVDDFRAAVGDTTEVIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFE 146
            +++P+     +     + Y+DVRT AEFAAGH+P A+N+ +      T  M+P PSF    RA +    ++IVGC+SG RS  A   L E G + ++ L GGFE
Sbjct:    5 EVAPEEAKRLLDAGEASCYLDVRTEAEFAAGHVPGAINIPVARINAATGRMEPDPSFAHKVRAKLSKGAKIIVGCRSGPRSEAACHILREHGYEHVVNLRGGFE 108          
BLAST of Ggra6575.t1 vs. uniprot
Match: A0A2V0NQ49 (Rhodanese domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NQ49_9CHLO)

HSP 1 Score: 76.6 bits (187), Expect = 5.070e-15
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 0
Query:   53 ALNDKMTQSSTAVYVDVRTPAEFAAGHIPRALNVSLTT--------HD-MKPLPSFVDDFRAAVGDT-TEVIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPIEQ 158
            A   ++ + +   Y+DVRTP EFA GH+P++LNV +          HD ++P P+FV++ R    DT  EVIV C +G+R++ A   LSEAG  G+     G + W A+  L +E+
Sbjct:   13 AETQQLVEKAGVPYIDVRTPHEFAEGHVPKSLNVPVALEGAAGPHDHDKLEPNPAFVEEVRKLFPDTKAEVIVACGAGRRAARAAALLSEAGYTGVKVFRDGMKGWTAEG-LAVEK 127          
BLAST of Ggra6575.t1 vs. uniprot
Match: A0A150GCK1 (Rhodanese domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GCK1_GONPE)

HSP 1 Score: 76.3 bits (186), Expect = 1.100e-14
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0
Query:   66 YVDVRTPAEFAAGHIPRALNVS---LTTHDMKPLPSFVDDFRAAVGDTTE-VIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAADSTLPIEQ 158
            Y+DVRT  EFAAGH P ++NV    L +  M P P+F+ +         E ++VGCKSG+RS +AI  L++AG   L+ L GGF+ WA    LP+E+
Sbjct:   53 YLDVRTTEEFAAGHAPSSVNVPVVFLGSGGMSPNPAFLAEVEKLFPSRAESLVVGCKSGRRSLMAIDVLAQAGYVDLVNLTGGFDLWAGQG-LPVEK 148          
The following BLAST results are available for this feature:
BLAST of Ggra6575.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK711.770e-4671.30Thiosulfate sulfurtransferase 16, chloroplastic n=... [more]
R7QPY22.600e-1840.68Rhodanese domain-containing protein n=1 Tax=Chondr... [more]
A0A2J7ZSM15.160e-1741.48Thiosulfate sulfurtransferase 16, chloroplastic n=... [more]
A0A8J4C9D57.290e-1736.84Uncharacterized protein n=2 Tax=Volvox reticulifer... [more]
A0A8J4BFX37.290e-1738.64Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
D8U2372.940e-1645.36Rhodanese domain-containing protein n=1 Tax=Volvox... [more]
A0A835WJN29.800e-1637.74Rhodanese domain-containing protein n=3 Tax=Chlamy... [more]
A0A3M1E5Q42.960e-1539.42Rhodanese-like domain-containing protein n=1 Tax=P... [more]
A0A2V0NQ495.070e-1537.93Rhodanese domain-containing protein n=1 Tax=Raphid... [more]
A0A150GCK11.100e-1444.33Rhodanese domain-containing protein n=1 Tax=Gonium... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001763Rhodanese-like domainSMARTSM00450rhod_4coord: 50..154
e-value: 5.5E-15
score: 65.8
IPR001763Rhodanese-like domainPFAMPF00581Rhodanesecoord: 51..150
e-value: 6.5E-15
score: 55.6
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 60..157
score: 16.581856
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 36..156
e-value: 1.4E-26
score: 94.8
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 45..157
NoneNo IPR availablePANTHERPTHR45431RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTICcoord: 59..151
NoneNo IPR availableCDDcd00158RHODcoord: 57..149
e-value: 1.66918E-20
score: 78.4954

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:312491..312967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6575.t1Ggra6575.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 312491..312967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6575.t1 ID=Ggra6575.t1|Name=Ggra6575.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=159bp
MSSPLIRAAARPAFVVLPASRRLARKSLSPVCPRTLVLHRAVHTMAAKLS
PQALNDKMTQSSTAVYVDVRTPAEFAAGHIPRALNVSLTTHDMKPLPSFV
DDFRAAVGDTTEVIVGCKSGKRSSIAITKLSEAGVQGLMELEGGFESWAA
DSTLPIEQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001763Rhodanese-like_dom
IPR036873Rhodanese-like_dom_sf